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Items: 41

1.

Sex Differences in Adrenal Bmal1 Deletion-Induced Augmentation of Glucocorticoid Responses to Stress and ACTH in Mice.

Engeland WC, Massman L, Miller L, Leng S, Pignatti E, Pantano L, Carlone DL, Kofuji P, Breault DT.

Endocrinology. 2019 Jul 29. pii: en.2019-00357. doi: 10.1210/en.2019-00357. [Epub ahead of print]

PMID:
31398249
2.

A High-Throughput Screening Identifies MicroRNA Inhibitors That Influence Neuronal Maintenance and/or Response to Oxidative Stress.

Pallarès-Albanell J, Zomeño-Abellán MT, Escaramís G, Pantano L, Soriano A, Segura MF, Martí E.

Mol Ther Nucleic Acids. 2019 Jun 20;17:374-387. doi: 10.1016/j.omtn.2019.06.007. [Epub ahead of print]

3.

Visualization of the small RNA transcriptome using seqclusterViz.

Pantano L, Pantano F, Marti E, Ho Sui S.

Version 2. F1000Res. 2019 Feb 28 [revised 2019 Jan 1];8. pii: ISCB Comm J-232. doi: 10.12688/f1000research.18142.2. eCollection 2019.

4.

Multi omics analysis of fibrotic kidneys in two mouse models.

Pavkovic M, Pantano L, Gerlach CV, Brutus S, Boswell SA, Everley RA, Shah JV, Sui SH, Vaidya VS.

Sci Data. 2019 Jun 14;6(1):92. doi: 10.1038/s41597-019-0095-5.

5.

The circulating metabolome of human starvation.

Steinhauser ML, Olenchock BA, O'Keefe J, Lun M, Pierce KA, Lee H, Pantano L, Klibanski A, Shulman GI, Clish CB, Fazeli PK.

JCI Insight. 2018 Aug 23;3(16). pii: 121434. doi: 10.1172/jci.insight.121434. eCollection 2018 Aug 23.

6.

Circulating miRNAs, isomiRs and small RNA clusters in human plasma and breast milk.

Rubio M, Bustamante M, Hernandez-Ferrer C, Fernandez-Orth D, Pantano L, Sarria Y, Piqué-Borras M, Vellve K, Agramunt S, Carreras R, Estivill X, Gonzalez JR, Mayor A.

PLoS One. 2018 Mar 5;13(3):e0193527. doi: 10.1371/journal.pone.0193527. eCollection 2018.

7.

Empirical comparison of reduced representation bisulfite sequencing and Infinium BeadChip reproducibility and coverage of DNA methylation in humans.

Carmona JJ, Accomando WP Jr, Binder AM, Hutchinson JN, Pantano L, Izzi B, Just AC, Lin X, Schwartz J, Vokonas PS, Amr SS, Baccarelli AA, Michels KB.

NPJ Genom Med. 2017 Apr 19;2:13. doi: 10.1038/s41525-017-0012-9. eCollection 2017.

8.

Viewing RNA-seq data on the entire human genome.

Weitz EM, Pantano L, Zhu J, Upton B, Busby B.

F1000Res. 2017 Apr 28;6:596. doi: 10.12688/f1000research.9762.1. eCollection 2017.

9.

Comparative analysis of LIN28-RNA binding sites identified at single nucleotide resolution.

Ransey E, Björkbom A, Lelyveld VS, Biecek P, Pantano L, Szostak JW, Sliz P.

RNA Biol. 2017 Dec 2;14(12):1756-1765. doi: 10.1080/15476286.2017.1356566. Epub 2017 Oct 9.

10.

Maintenance of macrophage transcriptional programs and intestinal homeostasis by epigenetic reader SP140.

Mehta S, Cronkite DA, Basavappa M, Saunders TL, Adiliaghdam F, Amatullah H, Morrison SA, Pagan JD, Anthony RM, Tonnerre P, Lauer GM, Lee JC, Digumarthi S, Pantano L, Ho Sui SJ, Ji F, Sadreyev R, Zhou C, Mullen AC, Kumar V, Li Y, Wijmenga C, Xavier RJ, Means TK, Jeffrey KL.

Sci Immunol. 2017 Mar 3;2(9). pii: eaag3160. doi: 10.1126/sciimmunol.aag3160. Epub 2017 Mar 3.

11.

Survey on the presence of non-dioxine-like PCBs (NDL-PCBs) in loggerhead turtles (Caretta caretta) stranded in south Mediterranean coasts (Sicily, Southern Italy).

Cammilleri G, Calvaruso E, Pantano L, Cascio GL, Randisi B, Macaluso A, Vazzana M, Caracappa G, Giangrosso G, Vella A, Ferrantelli V.

Environ Toxicol Chem. 2017 Nov;36(11):2997-3002. doi: 10.1002/etc.3866. Epub 2017 Jul 26.

PMID:
28544014
12.

Molecular, phenotypic, and sample-associated data to describe pluripotent stem cell lines and derivatives.

Daily K, Ho Sui SJ, Schriml LM, Dexheimer PJ, Salomonis N, Schroll R, Bush S, Keddache M, Mayhew C, Lotia S, Perumal TM, Dang K, Pantano L, Pico AR, Grassman E, Nordling D, Hide W, Hatzopoulos AK, Malik P, Cancelas JA, Lutzko C, Aronow BJ, Omberg L.

Sci Data. 2017 Mar 28;4:170030. doi: 10.1038/sdata.2017.30.

13.

Fatty acids determination in Bronte pistachios by gas chromatographic method.

Pantano L, Lo Cascio G, Alongi A, Cammilleri G, Vella A, Macaluso A, Cicero N, Migliazzo A, Ferrantelli V.

Nat Prod Res. 2016 Oct;30(20):2378-82. doi: 10.1080/14786419.2016.1180599. Epub 2016 Jun 4.

PMID:
27265004
14.

Genomic analyses identify molecular subtypes of pancreatic cancer.

Bailey P, Chang DK, Nones K, Johns AL, Patch AM, Gingras MC, Miller DK, Christ AN, Bruxner TJ, Quinn MC, Nourse C, Murtaugh LC, Harliwong I, Idrisoglu S, Manning S, Nourbakhsh E, Wani S, Fink L, Holmes O, Chin V, Anderson MJ, Kazakoff S, Leonard C, Newell F, Waddell N, Wood S, Xu Q, Wilson PJ, Cloonan N, Kassahn KS, Taylor D, Quek K, Robertson A, Pantano L, Mincarelli L, Sanchez LN, Evers L, Wu J, Pinese M, Cowley MJ, Jones MD, Colvin EK, Nagrial AM, Humphrey ES, Chantrill LA, Mawson A, Humphris J, Chou A, Pajic M, Scarlett CJ, Pinho AV, Giry-Laterriere M, Rooman I, Samra JS, Kench JG, Lovell JA, Merrett ND, Toon CW, Epari K, Nguyen NQ, Barbour A, Zeps N, Moran-Jones K, Jamieson NB, Graham JS, Duthie F, Oien K, Hair J, Grützmann R, Maitra A, Iacobuzio-Donahue CA, Wolfgang CL, Morgan RA, Lawlor RT, Corbo V, Bassi C, Rusev B, Capelli P, Salvia R, Tortora G, Mukhopadhyay D, Petersen GM; Australian Pancreatic Cancer Genome Initiative, Munzy DM, Fisher WE, Karim SA, Eshleman JR, Hruban RH, Pilarsky C, Morton JP, Sansom OJ, Scarpa A, Musgrove EA, Bailey UM, Hofmann O, Sutherland RL, Wheeler DA, Gill AJ, Gibbs RA, Pearson JV, Waddell N, Biankin AV, Grimmond SM.

Nature. 2016 Mar 3;531(7592):47-52. doi: 10.1038/nature16965. Epub 2016 Feb 24.

PMID:
26909576
15.

Specific small-RNA signatures in the amygdala at premotor and motor stages of Parkinson's disease revealed by deep sequencing analysis.

Pantano L, Friedländer MR, Escaramís G, Lizano E, Pallarès-Albanell J, Ferrer I, Estivill X, Martí E.

Bioinformatics. 2016 Mar 1;32(5):673-81. doi: 10.1093/bioinformatics/btv632. Epub 2015 Nov 2.

PMID:
26530722
16.

Functional Impact and Evolution of a Novel Human Polymorphic Inversion That Disrupts a Gene and Creates a Fusion Transcript.

Puig M, Castellano D, Pantano L, Giner-Delgado C, Izquierdo D, Gayà-Vidal M, Lucas-Lledó JI, Esko T, Terao C, Matsuda F, Cáceres M.

PLoS Genet. 2015 Oct 1;11(10):e1005495. doi: 10.1371/journal.pgen.1005495. eCollection 2015 Oct.

17.

The small RNA content of human sperm reveals pseudogene-derived piRNAs complementary to protein-coding genes.

Pantano L, Jodar M, Bak M, Ballescà JL, Tommerup N, Oliva R, Vavouri T.

RNA. 2015 Jun;21(6):1085-95. doi: 10.1261/rna.046482.114. Epub 2015 Apr 22.

18.

Paternal diet defines offspring chromatin state and intergenerational obesity.

Öst A, Lempradl A, Casas E, Weigert M, Tiko T, Deniz M, Pantano L, Boenisch U, Itskov PM, Stoeckius M, Ruf M, Rajewsky N, Reuter G, Iovino N, Ribeiro C, Alenius M, Heyne S, Vavouri T, Pospisilik JA.

Cell. 2014 Dec 4;159(6):1352-64. doi: 10.1016/j.cell.2014.11.005.

19.

Molecular dynamics, dynamic site mapping, and highthroughput virtual screening on leptin and the Ob receptor as anti-obesity target.

Tutone M, Pantano L, Lauria A, Almerico AM.

J Mol Model. 2014 May;20(5):2247. doi: 10.1007/s00894-014-2247-z. Epub 2014 May 6.

PMID:
24797089
20.

InvFEST, a database integrating information of polymorphic inversions in the human genome.

Martínez-Fundichely A, Casillas S, Egea R, Ràmia M, Barbadilla A, Pantano L, Puig M, Cáceres M.

Nucleic Acids Res. 2014 Jan;42(Database issue):D1027-32. doi: 10.1093/nar/gkt1122. Epub 2013 Nov 18.

21.

Microarray and deep sequencing cross-platform analysis of the mirRNome and isomiR variation in response to epidermal growth factor.

Llorens F, Hummel M, Pantano L, Pastor X, Vivancos A, Castillo E, Mattlin H, Ferrer A, Ingham M, Noguera M, Kofler R, Dohm JC, Pluvinet R, Bayés M, Himmelbauer H, del Rio JA, Martí E, Sumoy L.

BMC Genomics. 2013 Jun 1;14:371. doi: 10.1186/1471-2164-14-371.

22.

A3 adenosine receptor: homology modeling and 3D-QSAR studies.

Almerico AM, Tutone M, Pantano L, Lauria A.

J Mol Graph Model. 2013 May;42:60-72. doi: 10.1016/j.jmgm.2013.03.001. Epub 2013 Mar 19.

PMID:
23567933
23.

A highly expressed miR-101 isomiR is a functional silencing small RNA.

Llorens F, Bañez-Coronel M, Pantano L, del Río JA, Ferrer I, Estivill X, Martí E.

BMC Genomics. 2013 Feb 15;14:104. doi: 10.1186/1471-2164-14-104.

24.

Molecular dynamics studies on Mdm2 complexes: an analysis of the inhibitor influence.

Almerico AM, Tutone M, Pantano L, Lauria A.

Biochem Biophys Res Commun. 2012 Jul 27;424(2):341-7. doi: 10.1016/j.bbrc.2012.06.138. Epub 2012 Jul 3.

PMID:
22771796
25.

A pathogenic mechanism in Huntington's disease involves small CAG-repeated RNAs with neurotoxic activity.

Bañez-Coronel M, Porta S, Kagerbauer B, Mateu-Huertas E, Pantano L, Ferrer I, Guzmán M, Estivill X, Martí E.

PLoS Genet. 2012;8(2):e1002481. doi: 10.1371/journal.pgen.1002481. Epub 2012 Feb 23.

26.

A non-biased framework for the annotation and classification of the non-miRNA small RNA transcriptome.

Pantano L, Estivill X, Martí E.

Bioinformatics. 2011 Nov 15;27(22):3202-3. doi: 10.1093/bioinformatics/btr527. Epub 2011 Oct 5.

PMID:
21976421
27.
28.

A myriad of miRNA variants in control and Huntington's disease brain regions detected by massively parallel sequencing.

Martí E, Pantano L, Bañez-Coronel M, Llorens F, Miñones-Moyano E, Porta S, Sumoy L, Ferrer I, Estivill X.

Nucleic Acids Res. 2010 Nov;38(20):7219-35. doi: 10.1093/nar/gkq575. Epub 2010 Jun 30.

29.

SeqBuster, a bioinformatic tool for the processing and analysis of small RNAs datasets, reveals ubiquitous miRNA modifications in human embryonic cells.

Pantano L, Estivill X, Martí E.

Nucleic Acids Res. 2010 Mar;38(5):e34. doi: 10.1093/nar/gkp1127. Epub 2009 Dec 11.

30.

Identification of copy number variants defining genomic differences among major human groups.

Armengol L, Villatoro S, González JR, Pantano L, García-Aragonés M, Rabionet R, Cáceres M, Estivill X.

PLoS One. 2009 Sep 30;4(9):e7230. doi: 10.1371/journal.pone.0007230.

31.

ProSeeK: a web server for MLPA probe design.

Pantano L, Armengol L, Villatoro S, Estivill X.

BMC Genomics. 2008 Nov 28;9:573. doi: 10.1186/1471-2164-9-573.

32.

Fibroblast-derived induced pluripotent stem cells show no common retroviral vector insertions.

Varas F, Stadtfeld M, de Andres-Aguayo L, Maherali N, di Tullio A, Pantano L, Notredame C, Hochedlinger K, Graf T.

Stem Cells. 2009 Feb;27(2):300-6. doi: 10.1634/stemcells.2008-0696.

33.

Genome assembly comparison identifies structural variants in the human genome.

Khaja R, Zhang J, MacDonald JR, He Y, Joseph-George AM, Wei J, Rafiq MA, Qian C, Shago M, Pantano L, Aburatani H, Jones K, Redon R, Hurles M, Armengol L, Estivill X, Mural RJ, Lee C, Scherer SW, Feuk L.

Nat Genet. 2006 Dec;38(12):1413-8. Epub 2006 Nov 22.

34.

Psychosocial outcome in growth hormone deficient patients diagnosed during childhood.

Keselman A, Martínez A, Pantano L, Bergadá C, Heinrich JJ.

J Pediatr Endocrinol Metab. 2000 Apr;13(4):409-16.

PMID:
10776995
35.

[Nutritional studies in a commune of Lazio. Anthropometric data and food consumption in childhood].

Pantano LC, De Felice MA, Bevilacqua L, Morandini SR, Raponi A, Morandini L.

Minerva Pediatr. 1992 Jun;44(6):293-9. Italian.

PMID:
1635530
36.

[Adolescents and breast feeding].

Pantano LC, Bonetti F, Capodilupo A, Stirpe F, Terenzi P, Bevilacqua L.

Minerva Pediatr. 1990 Nov;42(11):473-9. Italian.

PMID:
2082173
37.

[Risk factors present in the recreation areas of nursery schools].

Pantano LC, Bevilacqua L, Capodilupo A, Pannozzo F, Picarazzi A.

Pediatr Med Chir. 1989 Jul-Aug;11(4):441-5. Italian.

PMID:
2616347
38.

[Congenital pseudoarthrosis of the clavicle].

Pantano LC, Grenga E, Masala R, Morandini S.

Pediatr Med Chir. 1988 Jul-Aug;10(4):445-7. Italian.

PMID:
3231551
39.

Positron collisions by methane and monosilane molecules below 10 eV.

Gianturco FA, Jain A, Pantano LC.

Phys Rev A Gen Phys. 1987 Nov 15;36(10):4637-4643. No abstract available.

PMID:
9898722
40.

Low-energy structure in electron-silane scattering.

Gianturco FA, Pantano LC, Scialla S.

Phys Rev A Gen Phys. 1987 Jul 15;36(2):557-563. No abstract available.

PMID:
9898896
41.

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