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Items: 5


Assignment of virus and antimicrobial resistance genes to microbial hosts in a complex microbial community by combined long-read assembly and proximity ligation.

Bickhart DM, Watson M, Koren S, Panke-Buisse K, Cersosimo LM, Press MO, Van Tassell CP, Van Kessel JAS, Haley BJ, Kim SW, Heiner C, Suen G, Bakshy K, Liachko I, Sullivan ST, Myer PR, Ghurye J, Pop M, Weimer PJ, Phillippy AM, Smith TPL.

Genome Biol. 2019 Aug 2;20(1):153. doi: 10.1186/s13059-019-1760-x.


Vineyard under-vine floor management alters soil microbial composition, while the fruit microbiome shows no corresponding shifts.

Chou MY, Vanden Heuvel J, Bell TH, Panke-Buisse K, Kao-Kniffin J.

Sci Rep. 2018 Jul 23;8(1):11039. doi: 10.1038/s41598-018-29346-1.


Genome Surfing As Driver of Microbial Genomic Diversity.

Choudoir MJ, Panke-Buisse K, Andam CP, Buckley DH.

Trends Microbiol. 2017 Aug;25(8):624-636. doi: 10.1016/j.tim.2017.02.006. Epub 2017 Mar 7. Review.


Cultivated Sub-Populations of Soil Microbiomes Retain Early Flowering Plant Trait.

Panke-Buisse K, Lee S, Kao-Kniffin J.

Microb Ecol. 2017 Feb;73(2):394-403. doi: 10.1007/s00248-016-0846-1. Epub 2016 Sep 21.


Selection on soil microbiomes reveals reproducible impacts on plant function.

Panke-Buisse K, Poole AC, Goodrich JK, Ley RE, Kao-Kniffin J.

ISME J. 2015 Mar 17;9(4):980-9. doi: 10.1038/ismej.2014.196.

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