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Items: 23

1.

Molecular evolutionary trends and feeding ecology diversification in the Hemiptera, anchored by the milkweed bug genome.

Panfilio KA, Vargas Jentzsch IM, Benoit JB, Erezyilmaz D, Suzuki Y, Colella S, Robertson HM, Poelchau MF, Waterhouse RM, Ioannidis P, Weirauch MT, Hughes DST, Murali SC, Werren JH, Jacobs CGC, Duncan EJ, Armisén D, Vreede BMI, Baa-Puyoulet P, Berger CS, Chang CC, Chao H, Chen MM, Chen YT, Childers CP, Chipman AD, Cridge AG, Crumière AJJ, Dearden PK, Didion EM, Dinh H, Doddapaneni HV, Dolan A, Dugan S, Extavour CG, Febvay G, Friedrich M, Ginzburg N, Han Y, Heger P, Holmes CJ, Horn T, Hsiao YM, Jennings EC, Johnston JS, Jones TE, Jones JW, Khila A, Koelzer S, Kovacova V, Leask M, Lee SL, Lee CY, Lovegrove MR, Lu HL, Lu Y, Moore PJ, Munoz-Torres MC, Muzny DM, Palli SR, Parisot N, Pick L, Porter ML, Qu J, Refki PN, Richter R, Rivera-Pomar R, Rosendale AJ, Roth S, Sachs L, Santos ME, Seibert J, Sghaier E, Shukla JN, Stancliffe RJ, Tidswell O, Traverso L, van der Zee M, Viala S, Worley KC, Zdobnov EM, Gibbs RA, Richards S.

Genome Biol. 2019 Apr 2;20(1):64. doi: 10.1186/s13059-019-1660-0.

2.

The genome of the water strider Gerris buenoi reveals expansions of gene repertoires associated with adaptations to life on the water.

Armisén D, Rajakumar R, Friedrich M, Benoit JB, Robertson HM, Panfilio KA, Ahn SJ, Poelchau MF, Chao H, Dinh H, Doddapaneni HV, Dugan S, Gibbs RA, Hughes DST, Han Y, Lee SL, Murali SC, Muzny DM, Qu J, Worley KC, Munoz-Torres M, Abouheif E, Bonneton F, Chen T, Chiang LM, Childers CP, Cridge AG, Crumière AJJ, Decaras A, Didion EM, Duncan EJ, Elpidina EN, Favé MJ, Finet C, Jacobs CGC, Cheatle Jarvela AM, Jennings EC, Jones JW, Lesoway MP, Lovegrove MR, Martynov A, Oppert B, Lillico-Ouachour A, Rajakumar A, Refki PN, Rosendale AJ, Santos ME, Toubiana W, van der Zee M, Vargas Jentzsch IM, Lowman AV, Viala S, Richards S, Khila A.

BMC Genomics. 2018 Nov 21;19(1):832. doi: 10.1186/s12864-018-5163-2.

3.

By land, air, and sea: hemipteran diversity through the genomic lens.

Panfilio KA, Angelini DR.

Curr Opin Insect Sci. 2018 Feb;25:106-115. doi: 10.1016/j.cois.2017.12.005. Epub 2017 Dec 24. Review.

4.

A model species for agricultural pest genomics: the genome of the Colorado potato beetle, Leptinotarsa decemlineata (Coleoptera: Chrysomelidae).

Schoville SD, Chen YH, Andersson MN, Benoit JB, Bhandari A, Bowsher JH, Brevik K, Cappelle K, Chen MM, Childers AK, Childers C, Christiaens O, Clements J, Didion EM, Elpidina EN, Engsontia P, Friedrich M, García-Robles I, Gibbs RA, Goswami C, Grapputo A, Gruden K, Grynberg M, Henrissat B, Jennings EC, Jones JW, Kalsi M, Khan SA, Kumar A, Li F, Lombard V, Ma X, Martynov A, Miller NJ, Mitchell RF, Munoz-Torres M, Muszewska A, Oppert B, Palli SR, Panfilio KA, Pauchet Y, Perkin LC, Petek M, Poelchau MF, Record É, Rinehart JP, Robertson HM, Rosendale AJ, Ruiz-Arroyo VM, Smagghe G, Szendrei Z, Thomas GWC, Torson AS, Vargas Jentzsch IM, Weirauch MT, Yates AD, Yocum GD, Yoon JS, Richards S.

Sci Rep. 2018 Jan 31;8(1):1931. doi: 10.1038/s41598-018-20154-1.

5.

Genome of the Asian longhorned beetle (Anoplophora glabripennis), a globally significant invasive species, reveals key functional and evolutionary innovations at the beetle-plant interface.

McKenna DD, Scully ED, Pauchet Y, Hoover K, Kirsch R, Geib SM, Mitchell RF, Waterhouse RM, Ahn SJ, Arsala D, Benoit JB, Blackmon H, Bledsoe T, Bowsher JH, Busch A, Calla B, Chao H, Childers AK, Childers C, Clarke DJ, Cohen L, Demuth JP, Dinh H, Doddapaneni H, Dolan A, Duan JJ, Dugan S, Friedrich M, Glastad KM, Goodisman MA, Haddad S, Han Y, Hughes DS, Ioannidis P, Johnston JS, Jones JW, Kuhn LA, Lance DR, Lee CY, Lee SL, Lin H, Lynch JA, Moczek AP, Murali SC, Muzny DM, Nelson DR, Palli SR, Panfilio KA, Pers D, Poelchau MF, Quan H, Qu J, Ray AM, Rinehart JP, Robertson HM, Roehrdanz R, Rosendale AJ, Shin S, Silva C, Torson AS, Jentzsch IM, Werren JH, Worley KC, Yocum G, Zdobnov EM, Gibbs RA, Richards S.

Genome Biol. 2016 Nov 11;17(1):227.

6.

Novel functions for Dorsocross in epithelial morphogenesis in the beetle Tribolium castaneum.

Horn T, Panfilio KA.

Development. 2016 Aug 15;143(16):3002-11. doi: 10.1242/dev.133280. Epub 2016 Jul 12.

7.

Unique features of a global human ectoparasite identified through sequencing of the bed bug genome.

Benoit JB, Adelman ZN, Reinhardt K, Dolan A, Poelchau M, Jennings EC, Szuter EM, Hagan RW, Gujar H, Shukla JN, Zhu F, Mohan M, Nelson DR, Rosendale AJ, Derst C, Resnik V, Wernig S, Menegazzi P, Wegener C, Peschel N, Hendershot JM, Blenau W, Predel R, Johnston PR, Ioannidis P, Waterhouse RM, Nauen R, Schorn C, Ott MC, Maiwald F, Johnston JS, Gondhalekar AD, Scharf ME, Peterson BF, Raje KR, Hottel BA, Armisén D, Crumière AJJ, Refki PN, Santos ME, Sghaier E, Viala S, Khila A, Ahn SJ, Childers C, Lee CY, Lin H, Hughes DST, Duncan EJ, Murali SC, Qu J, Dugan S, Lee SL, Chao H, Dinh H, Han Y, Doddapaneni H, Worley KC, Muzny DM, Wheeler D, Panfilio KA, Vargas Jentzsch IM, Vargo EL, Booth W, Friedrich M, Weirauch MT, Anderson MAE, Jones JW, Mittapalli O, Zhao C, Zhou JJ, Evans JD, Attardo GM, Robertson HM, Zdobnov EM, Ribeiro JMC, Gibbs RA, Werren JH, Palli SR, Schal C, Richards S.

Nat Commun. 2016 Feb 2;7:10165. doi: 10.1038/ncomms10165.

8.

The beetle amnion and serosa functionally interact as apposed epithelia.

Hilbrant M, Horn T, Koelzer S, Panfilio KA.

Elife. 2016 Jan 29;5. pii: e13834. doi: 10.7554/eLife.13834.

9.

Evolution of epithelial morphogenesis: phenotypic integration across multiple levels of biological organization.

Horn T, Hilbrant M, Panfilio KA.

Front Genet. 2015 Sep 29;6:303. doi: 10.3389/fgene.2015.00303. eCollection 2015.

10.

The iBeetle large-scale RNAi screen reveals gene functions for insect development and physiology.

Schmitt-Engel C, Schultheis D, Schwirz J, Ströhlein N, Troelenberg N, Majumdar U, Dao VA, Grossmann D, Richter T, Tech M, Dönitz J, Gerischer L, Theis M, Schild I, Trauner J, Koniszewski ND, Küster E, Kittelmann S, Hu Y, Lehmann S, Siemanowski J, Ulrich J, Panfilio KA, Schröder R, Morgenstern B, Stanke M, Buchhholz F, Frasch M, Roth S, Wimmer EA, Schoppmeier M, Klingler M, Bucher G.

Nat Commun. 2015 Jul 28;6:7822. doi: 10.1038/ncomms8822.

11.

Dynamic BMP signaling polarized by Toll patterns the dorsoventral axis in a hemimetabolous insect.

Sachs L, Chen YT, Drechsler A, Lynch JA, Panfilio KA, Lässig M, Berg J, Roth S.

Elife. 2015 May 12;4:e05502. doi: 10.7554/eLife.05502.

12.

Visualizing late insect embryogenesis: extraembryonic and mesodermal enhancer trap expression in the beetle Tribolium castaneum.

Koelzer S, Kölsch Y, Panfilio KA.

PLoS One. 2014 Jul 31;9(7):e103967. doi: 10.1371/journal.pone.0103967. eCollection 2014.

13.

Development: getting into the groove, or evolving off the rails?

Panfilio KA, Roth S.

Curr Biol. 2013 Dec 16;23(24):R1101-3. doi: 10.1016/j.cub.2013.10.073.

14.

High plasticity in epithelial morphogenesis during insect dorsal closure.

Panfilio KA, Oberhofer G, Roth S.

Biol Open. 2013 Sep 5;2(11):1108-18. doi: 10.1242/bio.20136072. eCollection 2013.

15.

Development. Making waves for segments.

Roth S, Panfilio KA.

Science. 2012 Apr 20;336(6079):306-7. doi: 10.1126/science.1222242. No abstract available.

PMID:
22517849
16.

The maternal and early embryonic transcriptome of the milkweed bug Oncopeltus fasciatus.

Ewen-Campen B, Shaner N, Panfilio KA, Suzuki Y, Roth S, Extavour CG.

BMC Genomics. 2011 Jan 25;12:61. doi: 10.1186/1471-2164-12-61.

17.

Epithelial reorganization events during late extraembryonic development in a hemimetabolous insect.

Panfilio KA, Roth S.

Dev Biol. 2010 Apr 1;340(1):100-15. doi: 10.1016/j.ydbio.2009.12.034. Epub 2010 Jan 4.

18.

As Tribolium matures as a model insect, Coleopteran Community Congregates in Cologne.

Lynch JA, Panfilio KA, da Fonseca RN.

Dev Genes Evol. 2009 Oct;219(9-10):531-3. doi: 10.1007/s00427-009-0307-7. Epub 2009 Dec 29. No abstract available.

PMID:
20039059
19.

Late extraembryonic morphogenesis and its zen(RNAi)-induced failure in the milkweed bug Oncopeltus fasciatus.

Panfilio KA.

Dev Biol. 2009 Sep 15;333(2):297-311. doi: 10.1016/j.ydbio.2009.06.036. Epub 2009 Jul 4.

20.

Extraembryonic development in insects and the acrobatics of blastokinesis.

Panfilio KA.

Dev Biol. 2008 Jan 15;313(2):471-91. Epub 2007 Nov 17. Review.

21.

A comparison of Hox3 and Zen protein coding sequences in taxa that span the Hox3/zen divergence.

Panfilio KA, Akam M.

Dev Genes Evol. 2007 Apr;217(4):323-9. Epub 2007 Feb 7.

PMID:
17285343
22.

Oncopeltus fasciatus zen is essential for serosal tissue function in katatrepsis.

Panfilio KA, Liu PZ, Akam M, Kaufman TC.

Dev Biol. 2006 Apr 1;292(1):226-43. Epub 2006 Feb 7.

23.

Nuclear beta-catenin promotes non-neural ectoderm and posterior cell fates in amphioxus embryos.

Holland LZ, Panfilio KA, Chastain R, Schubert M, Holland ND.

Dev Dyn. 2005 Aug;233(4):1430-43.

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