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Items: 1 to 50 of 135

1.

Analyzing aggregation propensities of clinically relevant PTEN mutants: a new culprit in pathogenesis of cancer and other PTENopathies.

Palumbo E, Zhao B, Xue B, Uversky VN, Davé V.

J Biomol Struct Dyn. 2019 Jun 22:1-14. doi: 10.1080/07391102.2019.1630005. [Epub ahead of print]

PMID:
31232187
2.

Standardized Use of the Stanford Integrated Psychosocial Assessment for Transplantation in LVAD Patients.

Cagliostro M, Bromley A, Ting P, Donehey J, Ferket B, Parks K, Palumbo E, Mancini D, Anyanwu A, Pawale A, Pinney S, Moss N, Lala A.

J Card Fail. 2019 Jun 18. pii: S1071-9164(19)30214-3. doi: 10.1016/j.cardfail.2019.06.006. [Epub ahead of print]

PMID:
31220624
3.

Common fragile site instability in normal cells: Lessons and perspectives.

Palumbo E, Russo A.

Genes Chromosomes Cancer. 2019 May;58(5):260-269. doi: 10.1002/gcc.22705. Epub 2018 Dec 21. Review.

PMID:
30387295
4.

Rad54/Rad54B deficiency is associated to increased chromosome breakage in mouse spermatocytes.

Russo A, Cordelli E, Salvitti T, Palumbo E, Pacchierotti F.

Mutagenesis. 2018 Oct 11;33(4):323-332. doi: 10.1093/mutage/gey027.

PMID:
30204892
5.

ggsashimi: Sashimi plot revised for browser- and annotation-independent splicing visualization.

Garrido-Martín D, Palumbo E, Guigó R, Breschi A.

PLoS Comput Biol. 2018 Aug 17;14(8):e1006360. doi: 10.1371/journal.pcbi.1006360. eCollection 2018 Aug.

6.

Energy balance dynamics during short-term high-intensity functional training.

Schubert MM, Palumbo EA.

Appl Physiol Nutr Metab. 2019 Feb;44(2):172-178. doi: 10.1139/apnm-2018-0311. Epub 2018 Jul 30.

PMID:
30058353
7.

The reference epigenome and regulatory chromatin landscape of chronic lymphocytic leukemia.

Beekman R, Chapaprieta V, Russiñol N, Vilarrasa-Blasi R, Verdaguer-Dot N, Martens JHA, Duran-Ferrer M, Kulis M, Serra F, Javierre BM, Wingett SW, Clot G, Queirós AC, Castellano G, Blanc J, Gut M, Merkel A, Heath S, Vlasova A, Ullrich S, Palumbo E, Enjuanes A, Martín-García D, Beà S, Pinyol M, Aymerich M, Royo R, Puiggros M, Torrents D, Datta A, Lowy E, Kostadima M, Roller M, Clarke L, Flicek P, Agirre X, Prosper F, Baumann T, Delgado J, López-Guillermo A, Fraser P, Yaspo ML, Guigó R, Siebert R, Martí-Renom MA, Puente XS, López-Otín C, Gut I, Stunnenberg HG, Campo E, Martin-Subero JI.

Nat Med. 2018 Jun;24(6):868-880. doi: 10.1038/s41591-018-0028-4. Epub 2018 May 21.

8.

[Nextflow, an efficient tool to improve computation numerical stability in genomic analysis].

Tommaso PD, Floden EW, Magis C, Palumbo E, Notredame C.

Biol Aujourdhui. 2017;211(3):233-237. doi: 10.1051/jbio/2017029. Epub 2018 Feb 7. French.

PMID:
29412134
9.

New species and new record of the genus Cheloniodiplostomum (Trematoda, Proterodiplostomidae, Polycotylinae), parasites of freshwater turtles from Argentina.

Palumbo E, Diaz JI.

Parasitol Res. 2018 Mar;117(3):767-773. doi: 10.1007/s00436-018-5750-9. Epub 2018 Jan 15.

PMID:
29333589
10.

Energy compensation after sprint- and high-intensity interval training.

Schubert MM, Palumbo E, Seay RF, Spain KK, Clarke HE.

PLoS One. 2017 Dec 15;12(12):e0189590. doi: 10.1371/journal.pone.0189590. eCollection 2017.

11.

Separase prevents genomic instability by controlling replication fork speed.

Cucco F, Palumbo E, Camerini S, D'Alessio B, Quarantotti V, Casella ML, Rizzo IM, Cukrov D, Delia D, Russo A, Crescenzi M, Musio A.

Nucleic Acids Res. 2018 Jan 9;46(1):267-278. doi: 10.1093/nar/gkx1172.

12.

PTEN Physically Interacts with and Regulates E2F1-mediated Transcription in Lung Cancer.

Malaney P, Palumbo E, Semidey-Hurtado J, Hardee J, Stanford K, Kathiriya JJ, Patel D, Tian Z, Allen-Gipson D, Davé V.

Cell Cycle. 2018;17(8):947-962. doi: 10.1080/15384101.2017.1388970. Epub 2018 May 31.

13.

Nextflow enables reproducible computational workflows.

Di Tommaso P, Chatzou M, Floden EW, Barja PP, Palumbo E, Notredame C.

Nat Biotechnol. 2017 Apr 11;35(4):316-319. doi: 10.1038/nbt.3820. No abstract available.

PMID:
28398311
14.

LncATLAS database for subcellular localization of long noncoding RNAs.

Mas-Ponte D, Carlevaro-Fita J, Palumbo E, Hermoso Pulido T, Guigo R, Johnson R.

RNA. 2017 Jul;23(7):1080-1087. doi: 10.1261/rna.060814.117. Epub 2017 Apr 6.

15.

Brain Transcriptome Sequencing of a Natural Model of Alzheimer's Disease.

Altimiras F, Uszczynska-Ratajczak B, Camara F, Vlasova A, Palumbo E, Newhouse S, Deacon RM, Farias LA, Hurley MJ, Loyola DE, Vásquez RA, Dobson R, Guigó R, Cogram P.

Front Aging Neurosci. 2017 Mar 20;9:64. doi: 10.3389/fnagi.2017.00064. eCollection 2017. No abstract available.

16.

Scalable Design of Paired CRISPR Guide RNAs for Genomic Deletion.

Pulido-Quetglas C, Aparicio-Prat E, Arnan C, Polidori T, Hermoso T, Palumbo E, Ponomarenko J, Guigo R, Johnson R.

PLoS Comput Biol. 2017 Mar 2;13(3):e1005341. doi: 10.1371/journal.pcbi.1005341. eCollection 2017 Mar.

17.

Chromosome Imbalances in Cancer: Molecular Cytogenetics Meets Genomics.

Palumbo E, Russo A.

Cytogenet Genome Res. 2016;150(3-4):176-184. doi: 10.1159/000455804. Epub 2017 Feb 14. Review.

18.

Discovery of Cancer Driver Long Noncoding RNAs across 1112 Tumour Genomes: New Candidates and Distinguishing Features.

Lanzós A, Carlevaro-Fita J, Mularoni L, Reverter F, Palumbo E, Guigó R, Johnson R.

Sci Rep. 2017 Jan 27;7:41544. doi: 10.1038/srep41544.

19.

ChimPipe: accurate detection of fusion genes and transcription-induced chimeras from RNA-seq data.

Rodríguez-Martín B, Palumbo E, Marco-Sola S, Griebel T, Ribeca P, Alonso G, Rastrojo A, Aguado B, Guigó R, Djebali S.

BMC Genomics. 2017 Jan 3;18(1):7. doi: 10.1186/s12864-016-3404-9.

20.

The USP1-UAF1 complex interacts with RAD51AP1 to promote homologous recombination repair.

Cukras S, Lee E, Palumbo E, Benavidez P, Moldovan GL, Kee Y.

Cell Cycle. 2016 Oct;15(19):2636-2646. Epub 2016 Jul 27.

21.

The Replication of Frataxin Gene Is Assured by Activation of Dormant Origins in the Presence of a GAA-Repeat Expansion.

Stevanoni M, Palumbo E, Russo A.

PLoS Genet. 2016 Jul 22;12(7):e1006201. doi: 10.1371/journal.pgen.1006201. eCollection 2016 Jul.

22.

Personalized Stem Cell Therapy to Correct Corneal Defects Due to a Unique Homozygous-Heterozygous Mosaicism of Ectrodactyly-Ectodermal Dysplasia-Clefting Syndrome.

Barbaro V, Nasti AA, Raffa P, Migliorati A, Nespeca P, Ferrari S, Palumbo E, Bertolin M, Breda C, Miceli F, Russo A, Caenazzo L, Ponzin D, Palù G, Parolin C, Di Iorio E.

Stem Cells Transl Med. 2016 Aug;5(8):1098-105. doi: 10.5966/sctm.2015-0358. Epub 2016 May 5.

23.

The impact of Docker containers on the performance of genomic pipelines.

Di Tommaso P, Palumbo E, Chatzou M, Prieto P, Heuer ML, Notredame C.

PeerJ. 2015 Sep 24;3:e1273. doi: 10.7717/peerj.1273. eCollection 2015.

24.

Perceptual Changes in Response to Two Regimens of Interval Training in Sedentary Women.

Astorino TA, Schubert MM, Palumbo E, Stirling D, McMillan DW, Gallant R, Dewoskin R.

J Strength Cond Res. 2016 Apr;30(4):1067-76. doi: 10.1519/JSC.0000000000001175.

PMID:
26340468
25.

Transcriptional diversity during lineage commitment of human blood progenitors.

Chen L, Kostadima M, Martens JHA, Canu G, Garcia SP, Turro E, Downes K, Macaulay IC, Bielczyk-Maczynska E, Coe S, Farrow S, Poudel P, Burden F, Jansen SBG, Astle WJ, Attwood A, Bariana T, de Bono B, Breschi A, Chambers JC, Consortium B, Choudry FA, Clarke L, Coupland P, van der Ent M, Erber WN, Jansen JH, Favier R, Fenech ME, Foad N, Freson K, van Geet C, Gomez K, Guigo R, Hampshire D, Kelly AM, Kerstens HHD, Kooner JS, Laffan M, Lentaigne C, Labalette C, Martin T, Meacham S, Mumford A, Nürnberg S, Palumbo E, van der Reijden BA, Richardson D, Sammut SJ, Slodkowicz G, Tamuri AU, Vasquez L, Voss K, Watt S, Westbury S, Flicek P, Loos R, Goldman N, Bertone P, Read RJ, Richardson S, Cvejic A, Soranzo N, Ouwehand WH, Stunnenberg HG, Frontini M, Rendon A.

Science. 2014 Sep 26;345(6204):1251033. doi: 10.1126/science.1251033.

26.

Functionality and prevalence of trehalose-based oligosaccharides as novel compatible solutes in ascospores of Neosartorya fischeri (Aspergillus fischeri) and other fungi.

Wyatt TT, van Leeuwen MR, Golovina EA, Hoekstra FA, Kuenstner EJ, Palumbo EA, Snyder NL, Visagie C, Verkennis A, Hallsworth JE, Wösten HA, Dijksterhuis J.

Environ Microbiol. 2015 Feb;17(2):395-411. doi: 10.1111/1462-2920.12558. Epub 2014 Oct 22.

27.

Nilotinib for the Frontline Treatment of Chronic Myeloid Leukemia Carrying the p230 Transcript: Dream or Reality?

Capuozzo M, Ottaiano A, Nava E, Cascone S, Cinque C, Vercellone A, Scognamiglio C, Palumbo E, Iaffaioli RV.

Front Oncol. 2014 Feb 3;4:17. doi: 10.3389/fonc.2014.00017. eCollection 2014. Review. No abstract available.

28.

Epidemiology and economic impact of celiac disease in the South vesuvian area of naples: a survey.

Capuozzo M, Ottaiano A, Nava E, Cascone S, Cinque C, Iaffaioli RV, Scognamiglio C, Palumbo E, Capuozzo M.

Front Public Health. 2013 Jun 13;1:18. doi: 10.3389/fpubh.2013.00018. eCollection 2013. No abstract available.

29.

[Recent advances in the diagnosis of vesicoureteral reflux in children].

Palumbo E.

Recenti Prog Med. 2013 Nov;104(11):585-9. doi: 10.1701/1370.15229. Italian.

PMID:
24336621
30.

General and specific replication profiles are detected in normal human cells by genome-wide and single-locus molecular combing.

Palumbo E, Tosoni E, Russo A.

Exp Cell Res. 2013 Dec 10;319(20):3081-93. doi: 10.1016/j.yexcr.2013.10.001. Epub 2013 Oct 12.

PMID:
24126019
31.

The deoxynucleotide triphosphohydrolase SAMHD1 is a major regulator of DNA precursor pools in mammalian cells.

Franzolin E, Pontarin G, Rampazzo C, Miazzi C, Ferraro P, Palumbo E, Reichard P, Bianchi V.

Proc Natl Acad Sci U S A. 2013 Aug 27;110(35):14272-7. doi: 10.1073/pnas.1312033110. Epub 2013 Jul 15.

32.

Genetic instability of the tumor suppressor gene FHIT in normal human cells.

Palumbo E, Tosoni E, Matricardi L, Russo A.

Genes Chromosomes Cancer. 2013 Sep;52(9):832-44. doi: 10.1002/gcc.22079. Epub 2013 Jun 18.

PMID:
23780737
33.

Magnitude and time course of changes in maximal oxygen uptake in response to distinct regimens of chronic interval training in sedentary women.

Astorino TA, Schubert MM, Palumbo E, Stirling D, McMillan DW, Cooper C, Godinez J, Martinez D, Gallant R.

Eur J Appl Physiol. 2013 Sep;113(9):2361-9. doi: 10.1007/s00421-013-2672-1. Epub 2013 Jun 11.

PMID:
23754097
34.

Effect of two doses of interval training on maximal fat oxidation in sedentary women.

Astorino TA, Schubert MM, Palumbo E, Stirling D, McMillan DW.

Med Sci Sports Exerc. 2013 Oct;45(10):1878-86. doi: 10.1249/MSS.0b013e3182936261.

PMID:
23531715
35.

Assessment of expenditure control and prescriptive appropriateness of biological drugs in autoimmune diseases and chronic inflammatory bowel disease.

Capuozzo M, Nava E, Cascone S, Cinque C, Marra R, Ottaiano A, Scognamiglio C, Palumbo E.

Front Pharmacol. 2013 Mar 22;4:31. doi: 10.3389/fphar.2013.00031. eCollection 2013. No abstract available.

36.

Management of paediatric Lyme disease in non-endemic and endemic areas: data from the Registry of the Italian Society for Pediatric Infectious Diseases.

Esposito S, Baggi E, Villani A, Norbedo S, Pellegrini G, Bozzola E, Palumbo E, Bosis S, Nigro G, Garazzino S, Principi N; SITIP Lyme Disease Registry.

Eur J Clin Microbiol Infect Dis. 2013 Apr;32(4):523-9. doi: 10.1007/s10096-012-1768-6. Epub 2012 Oct 30.

PMID:
23109197
37.

The pyrimidine nucleotide carrier PNC1 and mitochondrial trafficking of thymidine phosphates in cultured human cells.

Franzolin E, Miazzi C, Frangini M, Palumbo E, Rampazzo C, Bianchi V.

Exp Cell Res. 2012 Oct 15;318(17):2226-36. doi: 10.1016/j.yexcr.2012.05.028. Epub 2012 Jun 5.

PMID:
22677043
38.

Antigen identification starting from the genome: a "Reverse Vaccinology" approach applied to MenB.

Palumbo E, Fiaschi L, Brunelli B, Marchi S, Savino S, Pizza M.

Methods Mol Biol. 2012;799:361-403. doi: 10.1007/978-1-61779-346-2_21.

PMID:
21993656
39.

Rational design of a meningococcal antigen inducing broad protective immunity.

Scarselli M, Aricò B, Brunelli B, Savino S, Di Marcello F, Palumbo E, Veggi D, Ciucchi L, Cartocci E, Bottomley MJ, Malito E, Lo Surdo P, Comanducci M, Giuliani MM, Cantini F, Dragonetti S, Colaprico A, Doro F, Giannetti P, Pallaoro M, Brogioni B, Tontini M, Hilleringmann M, Nardi-Dei V, Banci L, Pizza M, Rappuoli R.

Sci Transl Med. 2011 Jul 13;3(91):91ra62. doi: 10.1126/scitranslmed.3002234.

40.

[Kawasaki's syndrome: recent advances in diagnosis and therapy].

Palumbo E.

Recenti Prog Med. 2010 Sep;101(9):355-8. Italian.

PMID:
21268373
41.

Pegylated interferon and ribavirin treatment for hepatitis C virus infection.

Palumbo E.

Ther Adv Chronic Dis. 2011 Jan;2(1):39-45. doi: 10.1177/2040622310384308.

42.

Characterization of diverse subvariants of the meningococcal factor H (fH) binding protein for their ability to bind fH, to mediate serum resistance, and to induce bactericidal antibodies.

Seib KL, Brunelli B, Brogioni B, Palumbo E, Bambini S, Muzzi A, DiMarcello F, Marchi S, van der Ende A, Aricó B, Savino S, Scarselli M, Comanducci M, Rappuoli R, Giuliani MM, Pizza M.

Infect Immun. 2011 Feb;79(2):970-81. doi: 10.1128/IAI.00891-10. Epub 2010 Dec 13.

43.

Influence of sequence variability on bactericidal activity sera induced by Factor H binding protein variant 1.1.

Brunelli B, Del Tordello E, Palumbo E, Biolchi A, Bambini S, Comanducci M, Muzzi A, Pizza M, Rappuoli R, Donnelly JJ, Giuliani MM, Serruto D.

Vaccine. 2011 Jan 29;29(5):1072-81. doi: 10.1016/j.vaccine.2010.11.064. Epub 2010 Dec 3.

PMID:
21130753
44.

Visceral leishmaniasis in children: a review.

Palumbo E.

Minerva Pediatr. 2010 Aug;62(4):389-95. Review.

PMID:
20940672
45.

Diarrhea in children: etiology and clinical aspects.

Palumbo E, Branchi M, Malorgio C, Siani A, Bonora G.

Minerva Pediatr. 2010 Aug;62(4):347-51.

PMID:
20940668
46.

Treatment strategies for mucocutaneous leishmaniasis.

Palumbo E.

J Glob Infect Dis. 2010 May;2(2):147-50. doi: 10.4103/0974-777X.62879.

47.

[Acute hemorrhagic syndrome by lupus anticoagulant].

Palumbo E.

Recenti Prog Med. 2010 May;101(5):199-201. Italian.

PMID:
20590016
48.

Replication dynamics at common fragile site FRA6E.

Palumbo E, Matricardi L, Tosoni E, Bensimon A, Russo A.

Chromosoma. 2010 Dec;119(6):575-87. doi: 10.1007/s00412-010-0279-4. Epub 2010 Jun 29.

PMID:
20585795
49.

[Dehydration in paediatric age: diagnosis and treatment].

Palumbo E.

Recenti Prog Med. 2009 Sep;100(9):414-6. Review. Italian.

PMID:
19886234
50.

Diarrhoea in children: aetiology and clinical aspects.

Palumbo E, Malorgio C, Siani A, Bonora G.

Infez Med. 2009 Jun;17(2):95-9.

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