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Items: 1 to 50 of 190

1.

Natural Auxin Does Not Inhibit Brefeldin A Induced PIN1 and PIN2 Internalization in Root Cells.

Paponov IA, Friz T, Budnyk V, Teale W, Wüst F, Paponov M, Al-Babili S, Palme K.

Front Plant Sci. 2019 May 9;10:574. doi: 10.3389/fpls.2019.00574. eCollection 2019.

2.

Salicylic Acid Affects Root Meristem Patterning via Auxin Distribution in a Concentration-Dependent Manner.

Pasternak T, Groot EP, Kazantsev FV, Teale W, Omelyanchuk N, Kovrizhnykh V, Palme K, Mironova VV.

Plant Physiol. 2019 Jul;180(3):1725-1739. doi: 10.1104/pp.19.00130. Epub 2019 Apr 29.

PMID:
31036755
3.

The MKK7-MPK6 MAP Kinase Module Is a Regulator of Meristem Quiescence or Active Growth in Arabidopsis.

Dóczi R, Hatzimasoura E, Farahi Bilooei S, Ahmad Z, Ditengou FA, López-Juez E, Palme K, Bögre L.

Front Plant Sci. 2019 Mar 5;10:202. doi: 10.3389/fpls.2019.00202. eCollection 2019.

4.

Author Correction: U-Net: deep learning for cell counting, detection, and morphometry.

Falk T, Mai D, Bensch R, Çiçek Ö, Abdulkadir A, Marrakchi Y, Böhm A, Deubner J, Jäckel Z, Seiwald K, Dovzhenko A, Tietz O, Bosco CD, Walsh S, Saltukoglu D, Tay TL, Prinz M, Palme K, Simons M, Diester I, Brox T, Ronneberger O.

Nat Methods. 2019 Apr;16(4):351. doi: 10.1038/s41592-019-0356-4.

PMID:
30804552
5.

Auxin-Induced Plasma Membrane Depolarization Is Regulated by Auxin Transport and Not by AUXIN BINDING PROTEIN1.

Paponov IA, Dindas J, Król E, Friz T, Budnyk V, Teale W, Paponov M, Hedrich R, Palme K.

Front Plant Sci. 2019 Jan 17;9:1953. doi: 10.3389/fpls.2018.01953. eCollection 2018.

6.

The Systems Architecture of Molecular Memory in Poplar after Abiotic Stress.

Georgii E, Kugler K, Pfeifer M, Vanzo E, Block K, Domagalska MA, Jud W, AbdElgawad H, Asard H, Reinhardt R, Hansel A, Spannagl M, Schäffner AR, Palme K, Mayer KFX, Schnitzler JP.

Plant Cell. 2019 Feb;31(2):346-367. doi: 10.1105/tpc.18.00431. Epub 2019 Jan 31.

7.

U-Net: deep learning for cell counting, detection, and morphometry.

Falk T, Mai D, Bensch R, Çiçek Ö, Abdulkadir A, Marrakchi Y, Böhm A, Deubner J, Jäckel Z, Seiwald K, Dovzhenko A, Tietz O, Dal Bosco C, Walsh S, Saltukoglu D, Tay TL, Prinz M, Palme K, Simons M, Diester I, Brox T, Ronneberger O.

Nat Methods. 2019 Jan;16(1):67-70. doi: 10.1038/s41592-018-0261-2. Epub 2018 Dec 17. Erratum in: Nat Methods. 2019 Apr;16(4):351.

PMID:
30559429
8.

[Successful pembrolizumab therapy in metastasized adenosquamous carcinoma of the colon].

Evert K, Stiegler C, Schäfer C, Palme K, Horndasch E, Reitinger S, Rau BM, Dietmaier W, Evert M.

Pathologe. 2018 Oct 22. doi: 10.1007/s00292-018-0546-3. [Epub ahead of print] German.

PMID:
30350176
9.

Root Gravitropism Is Regulated by a Crosstalk between para-Aminobenzoic Acid, Ethylene, and Auxin.

Nziengui H, Lasok H, Kochersperger P, Ruperti B, Rébeillé F, Palme K, Ditengou FA.

Plant Physiol. 2018 Nov;178(3):1370-1389. doi: 10.1104/pp.18.00126. Epub 2018 Oct 1.

10.

Interplay of the two ancient metabolites auxin and MEcPP regulates adaptive growth.

Jiang J, Rodriguez-Furlan C, Wang JZ, de Souza A, Ke H, Pasternak T, Lasok H, Ditengou FA, Palme K, Dehesh K.

Nat Commun. 2018 Jun 11;9(1):2262. doi: 10.1038/s41467-018-04708-5.

11.

Method for Ultrarapid High-Content Screening for Biologically Active Chemicals Using Plant Pollen.

Chuprov-Netochin R, Marusich E, Neskorodov Y, Mishutkina Y, Volynchuk P, Ivanenkov Y, Touraev A, Leonov S, Palme K.

Methods Mol Biol. 2018;1795:27-37. doi: 10.1007/978-1-4939-7874-8_3.

PMID:
29846916
12.

A PLA-iRoCS Pipeline for the Localization of Protein-Protein Interactions In Situ.

Pasternak T, Teale W, Falk T, Ruperti B, Palme K.

Methods Mol Biol. 2018;1787:161-170. doi: 10.1007/978-1-4939-7847-2_12.

PMID:
29736717
13.

Functional Analysis of the Arabidopsis thaliana CDPK-Related Kinase Family: AtCRK1 Regulates Responses to Continuous Light.

Baba AI, Rigó G, Ayaydin F, Rehman AU, Andrási N, Zsigmond L, Valkai I, Urbancsok J, Vass I, Pasternak T, Palme K, Szabados L, Cséplő Á.

Int J Mol Sci. 2018 Apr 25;19(5). pii: E1282. doi: 10.3390/ijms19051282.

14.

AUX1-mediated root hair auxin influx governs SCFTIR1/AFB-type Ca2+ signaling.

Dindas J, Scherzer S, Roelfsema MRG, von Meyer K, Müller HM, Al-Rasheid KAS, Palme K, Dietrich P, Becker D, Bennett MJ, Hedrich R.

Nat Commun. 2018 Mar 21;9(1):1174. doi: 10.1038/s41467-018-03582-5.

15.

Data-Driven Modeling of Intracellular Auxin Fluxes Indicates a Dominant Role of the ER in Controlling Nuclear Auxin Uptake.

Middleton AM, Dal Bosco C, Chlap P, Bensch R, Harz H, Ren F, Bergmann S, Wend S, Weber W, Hayashi KI, Zurbriggen MD, Uhl R, Ronneberger O, Palme K, Fleck C, Dovzhenko A.

Cell Rep. 2018 Mar 13;22(11):3044-3057. doi: 10.1016/j.celrep.2018.02.074.

16.

Converging Light, Energy and Hormonal Signaling Control Meristem Activity, Leaf Initiation, and Growth.

Mohammed B, Bilooei SF, Dóczi R, Grove E, Railo S, Palme K, Ditengou FA, Bögre L, López-Juez E.

Plant Physiol. 2018 Feb;176(2):1365-1381. doi: 10.1104/pp.17.01730. Epub 2017 Dec 28.

17.

A re-engineered immunotoxin shows promising preclinical activity in ovarian cancer.

Kollmorgen G, Palme K, Seidl A, Scheiblich S, Birzele F, Wilson S, Clemens C, Voss E, Kaufmann M, Hirzel K, Rieder N, Krippendorff BF, Herting F, Niederfellner G.

Sci Rep. 2017 Dec 22;7(1):18086. doi: 10.1038/s41598-017-17329-7.

18.

Characterization of auxin transporter PIN6 plasma membrane targeting reveals a function for PIN6 in plant bolting.

Ditengou FA, Gomes D, Nziengui H, Kochersperger P, Lasok H, Medeiros V, Paponov IA, Nagy SK, Nádai TV, Mészáros T, Barnabás B, Ditengou BI, Rapp K, Qi L, Li X, Becker C, Li C, Dóczi R, Palme K.

New Phytol. 2018 Mar;217(4):1610-1624. doi: 10.1111/nph.14923. Epub 2017 Dec 8.

19.

Coevolving MAPK and PID phosphosites indicate an ancient environmental control of PIN auxin transporters in land plants.

Dory M, Hatzimasoura E, Kállai BM, Nagy SK, Jäger K, Darula Z, Nádai TV, Mészáros T, López-Juez E, Barnabás B, Palme K, Bögre L, Ditengou FA, Dóczi R.

FEBS Lett. 2018 Jan;592(1):89-102. doi: 10.1002/1873-3468.12929. Epub 2017 Dec 25.

20.

Naphthylphthalamic acid and the mechanism of polar auxin transport.

Teale W, Palme K.

J Exp Bot. 2018 Jan 4;69(2):303-312. doi: 10.1093/jxb/erx323. Review.

PMID:
28992080
21.

3D analysis of mitosis distribution highlights the longitudinal zonation and diarch symmetry in proliferation activity of the Arabidopsis thaliana root meristem.

Lavrekha VV, Pasternak T, Ivanov VB, Palme K, Mironova VV.

Plant J. 2017 Dec;92(5):834-845. doi: 10.1111/tpj.13720. Epub 2017 Oct 20.

22.

Protoplast Swelling and Hypocotyl Growth Depend on Different Auxin Signaling Pathways.

Dahlke RI, Fraas S, Ullrich KK, Heinemann K, Romeiks M, Rickmeyer T, Klebe G, Palme K, Lüthen H, Steffens B.

Plant Physiol. 2017 Oct;175(2):982-994. doi: 10.1104/pp.17.00733. Epub 2017 Aug 31.

23.

A 3D digital atlas of the Nicotiana tabacum root tip and its use to investigate changes in the root apical meristem induced by the Agrobacterium 6b oncogene.

Pasternak T, Haser T, Falk T, Ronneberger O, Palme K, Otten L.

Plant J. 2017 Oct;92(1):31-42. doi: 10.1111/tpj.13631. Epub 2017 Aug 11.

24.

A method for characterizing phenotypic changes in highly variable cell populations and its application to high content screening of Arabidopsis thaliana protoplasts.

Johnson GR, Kangas JD, Dovzhenko A, Trojok R, Voigt K, Majarian TD, Palme K, Murphy RF.

Cytometry A. 2017 Apr;91(4):326-335. doi: 10.1002/cyto.a.23067. Epub 2017 Feb 28.

25.

The Systems Biology of Auxin in Developing Embryos.

Mironova V, Teale W, Shahriari M, Dawson J, Palme K.

Trends Plant Sci. 2017 Mar;22(3):225-235. doi: 10.1016/j.tplants.2016.11.010. Epub 2017 Jan 25. Review.

PMID:
28131745
26.

Novel small molecule modulators of plant growth and development identified by high-content screening with plant pollen.

Chuprov-Netochin R, Neskorodov Y, Marusich E, Mishutkina Y, Volynchuk P, Leonov S, Skryabin K, Ivashenko A, Palme K, Touraev A.

BMC Plant Biol. 2016 Sep 6;16(1):192. doi: 10.1186/s12870-016-0875-4.

27.

Separation of ballistic and diffusive fluorescence photons in confocal Light-Sheet Microscopy of Arabidopsis roots.

Meinert T, Tietz O, Palme KJ, Rohrbach A.

Sci Rep. 2016 Aug 24;6:30378. doi: 10.1038/srep30378.

28.

Plant Signaling: HY5 Synchronizes Resource Supply.

Palme K, Teale W, Dovzhenko A.

Curr Biol. 2016 Apr 25;26(8):R328-9. doi: 10.1016/j.cub.2016.02.060.

29.

Hydrolases of the ILR1-like family of Arabidopsis thaliana modulate auxin response by regulating auxin homeostasis in the endoplasmic reticulum.

Sanchez Carranza AP, Singh A, Steinberger K, Panigrahi K, Palme K, Dovzhenko A, Dal Bosco C.

Sci Rep. 2016 Apr 11;6:24212. doi: 10.1038/srep24212.

30.

ROSY1, a novel regulator of gravitropic response is a stigmasterol binding protein.

Dalal J, Lewis DR, Tietz O, Brown EM, Brown CS, Palme K, Muday GK, Sederoff HW.

J Plant Physiol. 2016 Jun 1;196-197:28-40. doi: 10.1016/j.jplph.2016.03.011. Epub 2016 Mar 24.

31.

A detailed expression map of the PIN1 auxin transporter in Arabidopsis thaliana root.

Omelyanchuk NA, Kovrizhnykh VV, Oshchepkova EA, Pasternak T, Palme K, Mironova VV.

BMC Plant Biol. 2016 Jan 27;16 Suppl 1:5. doi: 10.1186/s12870-015-0685-0.

32.

Inhibition of Cell Expansion by Rapid ABP1-Mediated Auxin Effect on Microtubules? A Critical Comment.

Schopfer P, Palme K.

Plant Physiol. 2016 Jan;170(1):23-5. doi: 10.1104/pp.15.01403. Epub 2015 Nov 4. No abstract available.

33.

Protocol: an improved and universal procedure for whole-mount immunolocalization in plants.

Pasternak T, Tietz O, Rapp K, Begheldo M, Nitschke R, Ruperti B, Palme K.

Plant Methods. 2015 Oct 28;11:50. doi: 10.1186/s13007-015-0094-2. eCollection 2015.

34.

Ethylene negatively regulates transcript abundance of ROP-GAP rheostat-encoding genes and affects apoplastic reactive oxygen species homeostasis in epicarps of cold stored apple fruits.

Zermiani M, Zonin E, Nonis A, Begheldo M, Ceccato L, Vezzaro A, Baldan B, Trentin A, Masi A, Pegoraro M, Fadanelli L, Teale W, Palme K, Quintieri L, Ruperti B.

J Exp Bot. 2015 Dec;66(22):7255-70. doi: 10.1093/jxb/erv422. Epub 2015 Oct 1.

35.

RNAi-mediated downregulation of poplar plasma membrane intrinsic proteins (PIPs) changes plasma membrane proteome composition and affects leaf physiology.

Bi Z, Merl-Pham J, Uehlein N, Zimmer I, Mühlhans S, Aichler M, Walch AK, Kaldenhoff R, Palme K, Schnitzler JP, Block K.

J Proteomics. 2015 Oct 14;128:321-32. doi: 10.1016/j.jprot.2015.07.029. Epub 2015 Aug 4.

PMID:
26248320
36.

Identification of the Arabidopsis RAM/MOR signalling network: adding new regulatory players in plant stem cell maintenance and cell polarization.

Zermiani M, Begheldo M, Nonis A, Palme K, Mizzi L, Morandini P, Nonis A, Ruperti B.

Ann Bot. 2015 Jul;116(1):69-89. doi: 10.1093/aob/mcv066. Epub 2015 Jun 15.

37.

Volatile signalling by sesquiterpenes from ectomycorrhizal fungi reprogrammes root architecture.

Ditengou FA, Müller A, Rosenkranz M, Felten J, Lasok H, van Doorn MM, Legué V, Palme K, Schnitzler JP, Polle A.

Nat Commun. 2015 Feb 23;6:6279. doi: 10.1038/ncomms7279.

38.

Towards second green revolution: engineering nitrogen use efficiency.

Palme K, Li X, Teale WD.

J Genet Genomics. 2014 Jun 20;41(6):315-6. doi: 10.1016/j.jgg.2014.05.003. Epub 2014 Jun 10. No abstract available.

PMID:
24976120
39.

A tobacco homolog of DCN1 is involved in pollen development and embryogenesis.

Hosp J, Ribarits A, Retzer K, Jin Y, Tashpulatov A, Resch T, Friedmann C, Ankele E, Voronin V, Palme K, Heberle-Bors E, Touraev A.

Plant Cell Rep. 2014 Jul;33(7):1187-202. doi: 10.1007/s00299-014-1609-4. Epub 2014 Apr 22. Erratum in: Plant Cell Rep. 2014 Nov;33(11):1933-4.

PMID:
24748527
40.

The iRoCS Toolbox--3D analysis of the plant root apical meristem at cellular resolution.

Schmidt T, Pasternak T, Liu K, Blein T, Aubry-Hivet D, Dovzhenko A, Duerr J, Teale W, Ditengou FA, Burkhardt H, Ronneberger O, Palme K.

Plant J. 2014 Mar;77(5):806-14. doi: 10.1111/tpj.12429. Epub 2014 Feb 12.

41.

Analysis of gene expression during parabolic flights reveals distinct early gravity responses in Arabidopsis roots.

Aubry-Hivet D, Nziengui H, Rapp K, Oliveira O, Paponov IA, Li Y, Hauslage J, Vagt N, Braun M, Ditengou FA, Dovzhenko A, Palme K.

Plant Biol (Stuttg). 2014 Jan;16 Suppl 1:129-41. doi: 10.1111/plb.12130.

PMID:
24373012
42.

Plant biology in space.

Ruyters G, Spiero F, Legué V, Palme K.

Plant Biol (Stuttg). 2014 Jan;16 Suppl 1:1-3. doi: 10.1111/plb.12129. No abstract available.

PMID:
24373008
43.

Variational attenuation correction in two-view confocal microscopy.

Schmidt T, Dürr J, Keuper M, Blein T, Palme K, Ronneberger O.

BMC Bioinformatics. 2013 Dec 18;14:366. doi: 10.1186/1471-2105-14-366.

44.

Plastid-localized glutathione reductase2-regulated glutathione redox status is essential for Arabidopsis root apical meristem maintenance.

Yu X, Pasternak T, Eiblmeier M, Ditengou F, Kochersperger P, Sun J, Wang H, Rennenberg H, Teale W, Paponov I, Zhou W, Li C, Li X, Palme K.

Plant Cell. 2013 Nov;25(11):4451-68. doi: 10.1105/tpc.113.117028. Epub 2013 Nov 18.

45.

The Arabidopsis thaliana Mob1A gene is required for organ growth and correct tissue patterning of the root tip.

Pinosa F, Begheldo M, Pasternak T, Zermiani M, Paponov IA, Dovzhenko A, Barcaccia G, Ruperti B, Palme K.

Ann Bot. 2013 Dec;112(9):1803-14. doi: 10.1093/aob/mct235. Epub 2013 Nov 7.

46.

Root systems analysis branches out.

Palme K, Teale W.

Mol Syst Biol. 2013 Oct 22;9:698. doi: 10.1038/msb.2013.51. No abstract available.

47.

ERECTA family genes regulate auxin transport in the shoot apical meristem and forming leaf primordia.

Chen MK, Wilson RL, Palme K, Ditengou FA, Shpak ED.

Plant Physiol. 2013 Aug;162(4):1978-91. doi: 10.1104/pp.113.218198. Epub 2013 Jul 2.

48.

Maternal control of PIN1 is required for female gametophyte development in Arabidopsis.

Ceccato L, Masiero S, Sinha Roy D, Bencivenga S, Roig-Villanova I, Ditengou FA, Palme K, Simon R, Colombo L.

PLoS One. 2013 Jun 17;8(6):e66148. doi: 10.1371/journal.pone.0066148. Print 2013.

49.

A quantitative ratiometric sensor for time-resolved analysis of auxin dynamics.

Wend S, Dal Bosco C, Kämpf MM, Ren F, Palme K, Weber W, Dovzhenko A, Zurbriggen MD.

Sci Rep. 2013;3:2052. doi: 10.1038/srep02052.

50.

Inactivation of plasma membrane-localized CDPK-RELATED KINASE5 decelerates PIN2 exocytosis and root gravitropic response in Arabidopsis.

Rigó G, Ayaydin F, Tietz O, Zsigmond L, Kovács H, Páy A, Salchert K, Darula Z, Medzihradszky KF, Szabados L, Palme K, Koncz C, Cséplo A.

Plant Cell. 2013 May;25(5):1592-608. doi: 10.1105/tpc.113.110452. Epub 2013 May 14.

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