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Items: 22

1.

Quantification of Neurotransmitters from Intact and Regenerating Planarians Using UHPLC-MS/SRM Method.

Rangiah K, Palakodeti D.

Methods Mol Biol. 2018;1774:555-570. doi: 10.1007/978-1-4939-7802-1_25.

PMID:
29916178
2.

Post-transcriptional regulation in planarian stem cells.

Krishna S, Palakodeti D, Solana J.

Semin Cell Dev Biol. 2018 Jun 8. pii: S1084-9521(17)30204-5. doi: 10.1016/j.semcdb.2018.05.013. [Epub ahead of print] Review.

PMID:
29870807
3.

Identification of multiple isomeric core chitobiose-modified high-mannose and paucimannose N-glycans in the planarian Schmidtea mediterranea.

Subramanian SP, Babu P, Palakodeti D, Subramanian R.

J Biol Chem. 2018 May 4;293(18):6707-6720. doi: 10.1074/jbc.RA117.000782. Epub 2018 Feb 23.

4.

Developmentally regulated higher-order chromatin interactions orchestrate B cell fate commitment.

Boya R, Yadavalli AD, Nikhat S, Kurukuti S, Palakodeti D, Pongubala JMR.

Nucleic Acids Res. 2017 Nov 2;45(19):11070-11087. doi: 10.1093/nar/gkx722.

5.

Cytoplasmic poly (A)-binding protein critically regulates epidermal maintenance and turnover in the planarian Schmidtea mediterranea.

Bansal D, Kulkarni J, Nadahalli K, Lakshmanan V, Krishna S, Sasidharan V, Geo J, Dilipkumar S, Pasricha R, Gulyani A, Raghavan S, Palakodeti D.

Development. 2017 Sep 1;144(17):3066-3079. doi: 10.1242/dev.152942. Epub 2017 Aug 14.

6.

The miR-124 family of microRNAs is crucial for regeneration of the brain and visual system in the planarian Schmidtea mediterranea.

Sasidharan V, Marepally S, Elliott SA, Baid S, Lakshmanan V, Nayyar N, Bansal D, Sánchez Alvarado A, Vemula PK, Palakodeti D.

Development. 2017 Sep 15;144(18):3211-3223. doi: 10.1242/dev.144758. Epub 2017 Aug 14.

7.

Hierarchies in light sensing and dynamic interactions between ocular and extraocular sensory networks in a flatworm.

Shettigar N, Joshi A, Dalmeida R, Gopalkrishna R, Chakravarthy A, Patnaik S, Mathew M, Palakodeti D, Gulyani A.

Sci Adv. 2017 Jul 28;3(7):e1603025. doi: 10.1126/sciadv.1603025. eCollection 2017 Jul.

8.

MiRNA182 regulates percentage of myeloid and erythroid cells in chronic myeloid leukemia.

Arya D, Sachithanandan SP, Ross C, Palakodeti D, Li S, Krishna S.

Cell Death Dis. 2017 Jan 12;8(1):e2547. doi: 10.1038/cddis.2016.471.

9.

Genome-Wide Analysis of Polyadenylation Events in Schmidtea mediterranea.

Lakshmanan V, Bansal D, Kulkarni J, Poduval D, Krishna S, Sasidharan V, Anand P, Seshasayee A, Palakodeti D.

G3 (Bethesda). 2016 Oct 13;6(10):3035-3048. doi: 10.1534/g3.116.031120.

10.

A quantitative metabolomics peek into planarian regeneration.

Natarajan N, Ramakrishnan P, Lakshmanan V, Palakodeti D, Rangiah K.

Analyst. 2015 May 21;140(10):3445-64. doi: 10.1039/c4an02037e. Epub 2015 Mar 27.

PMID:
25815385
11.

Ezh2 mediated H3K27me3 activity facilitates somatic transition during human pluripotent reprogramming.

Rao RA, Dhele N, Cheemadan S, Ketkar A, Jayandharan GR, Palakodeti D, Rampalli S.

Sci Rep. 2015 Feb 4;5:8229. doi: 10.1038/srep08229.

12.

Vertebrate Hedgehog is secreted on two types of extracellular vesicles with different signaling properties.

Vyas N, Walvekar A, Tate D, Lakshmanan V, Bansal D, Lo Cicero A, Raposo G, Palakodeti D, Dhawan J.

Sci Rep. 2014 Dec 8;4:7357. doi: 10.1038/srep07357.

13.
14.

Identification of neoblast- and regeneration-specific miRNAs in the planarian Schmidtea mediterranea.

Sasidharan V, Lu YC, Bansal D, Dasari P, Poduval D, Seshasayee A, Resch AM, Graveley BR, Palakodeti D.

RNA. 2013 Oct;19(10):1394-404. doi: 10.1261/rna.038653.113. Epub 2013 Aug 23.

15.

Deep sequencing reveals unique small RNA repertoire that is regulated during head regeneration in Hydra magnipapillata.

Krishna S, Nair A, Cheedipudi S, Poduval D, Dhawan J, Palakodeti D, Ghanekar Y.

Nucleic Acids Res. 2013 Jan 7;41(1):599-616. doi: 10.1093/nar/gks1020. Epub 2012 Nov 19.

16.

Transcriptome analysis reveals strain-specific and conserved stemness genes in Schmidtea mediterranea.

Resch AM, Palakodeti D, Lu YC, Horowitz M, Graveley BR.

PLoS One. 2012;7(4):e34447. doi: 10.1371/journal.pone.0034447. Epub 2012 Apr 4.

17.

Small RNA pathways in Schmidtea mediterranea.

Resch AM, Palakodeti D.

Int J Dev Biol. 2012;56(1-3):67-74. doi: 10.1387/ijdb.113436ar. Review.

18.

Loss of DNA mismatch repair imparts a selective advantage in planarian adult stem cells.

Hollenbach JP, Resch AM, Palakodeti D, Graveley BR, Heinen CD.

PLoS One. 2011;6(7):e21808. doi: 10.1371/journal.pone.0021808. Epub 2011 Jul 1.

19.

microRNA-Seq reveals cocaine-regulated expression of striatal microRNAs.

Eipper-Mains JE, Kiraly DD, Palakodeti D, Mains RE, Eipper BA, Graveley BR.

RNA. 2011 Aug;17(8):1529-43. doi: 10.1261/rna.2775511. Epub 2011 Jun 27.

20.

Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea.

Lu YC, Smielewska M, Palakodeti D, Lovci MT, Aigner S, Yeo GW, Graveley BR.

RNA. 2009 Aug;15(8):1483-91. doi: 10.1261/rna.1702009. Epub 2009 Jun 24.

21.

The PIWI proteins SMEDWI-2 and SMEDWI-3 are required for stem cell function and piRNA expression in planarians.

Palakodeti D, Smielewska M, Lu YC, Yeo GW, Graveley BR.

RNA. 2008 Jun;14(6):1174-86. doi: 10.1261/rna.1085008. Epub 2008 May 2.

22.

MicroRNAs from the Planarian Schmidtea mediterranea: a model system for stem cell biology.

Palakodeti D, Smielewska M, Graveley BR.

RNA. 2006 Sep;12(9):1640-9. Epub 2006 Jul 18.

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