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Items: 1 to 50 of 127

1.

Augmented CD133 expression in distal margin correlates with poor prognosis in colorectal cancer.

Pradhan T, Padmanabhan K, Prasad M, Chandramohan K, Nair SA.

J Cell Mol Med. 2019 Jun;23(6):3984-3994. doi: 10.1111/jcmm.14284. Epub 2019 Apr 4.

2.

The Wave complex controls epidermal morphogenesis and proliferation by suppressing Wnt-Sox9 signaling.

Cohen J, Raviv S, Adir O, Padmanabhan K, Soffer A, Luxenburg C.

J Cell Biol. 2019 Apr 1;218(4):1390-1406. doi: 10.1083/jcb.201807216. Epub 2019 Mar 13.

3.

Species-specific maturation profiles of human, chimpanzee and bonobo neural cells.

Marchetto MC, Hrvoj-Mihic B, Kerman BE, Yu DX, Vadodaria KC, Linker SB, Narvaiza I, Santos R, Denli AM, Mendes AP, Oefner R, Cook J, McHenry L, Grasmick JM, Heard K, Fredlender C, Randolph-Moore L, Kshirsagar R, Xenitopoulos R, Chou G, Hah N, Muotri AR, Padmanabhan K, Semendeferi K, Gage FH.

Elife. 2019 Feb 7;8. pii: e37527. doi: 10.7554/eLife.37527.

4.

Centrifugal Inputs to the Main Olfactory Bulb Revealed Through Whole Brain Circuit-Mapping.

Padmanabhan K, Osakada F, Tarabrina A, Kizer E, Callaway EM, Gage FH, Sejnowski TJ.

Front Neuroanat. 2019 Jan 7;12:115. doi: 10.3389/fnana.2018.00115. eCollection 2018.

5.

Microwave (MW) remediation of hydrocarbon contaminated soil using spent graphite - An approach for waste as a resource.

Sivagami K, Padmanabhan K, Joy AC, Nambi IM.

J Environ Manage. 2019 Jan 15;230:151-158. doi: 10.1016/j.jenvman.2018.08.071. Epub 2018 Oct 1.

PMID:
30286345
6.

Clinical profile and risk factors associated with severe scrub typhus infection among non-ICU patients in semi-urban south India.

Premraj SS, Mayilananthi K, Krishnan D, Padmanabhan K, Rajasekaran D.

J Vector Borne Dis. 2018 Jan-Mar;55(1):47-51. doi: 10.4103/0972-9062.234626.

7.

Efficient Generation of CA3 Neurons from Human Pluripotent Stem Cells Enables Modeling of Hippocampal Connectivity In Vitro.

Sarkar A, Mei A, Paquola ACM, Stern S, Bardy C, Klug JR, Kim S, Neshat N, Kim HJ, Ku M, Shokhirev MN, Adamowicz DH, Marchetto MC, Jappelli R, Erwin JA, Padmanabhan K, Shtrahman M, Jin X, Gage FH.

Cell Stem Cell. 2018 May 3;22(5):684-697.e9. doi: 10.1016/j.stem.2018.04.009.

8.

Impact of various foot arches on dynamic balance and speed performance in collegiate short distance runners: A cross-sectional comparative study.

Sudhakar S, Kirthika SV, Padmanabhan K, Kumar GM, Nathan CVS, Gopika R, Samuel AJ.

J Orthop. 2018 Feb 2;15(1):114-117. doi: 10.1016/j.jor.2018.01.050. eCollection 2018 Mar.

9.

Homology threading to generate RNA polymerase structures.

Kim Y, Benning N, Pham K, Baghdadi N, Caruso G, Colligan M, Grayson A, Hurley A, Ignatoski N, Mcclure S, Mckaig K, Neag E, Showers C, Tangalos A, Vanells J, Padmanabhan K, Burton ZF.

Protein Expr Purif. 2018 Jul;147:13-16. doi: 10.1016/j.pep.2018.02.002. Epub 2018 Feb 11. Review.

PMID:
29444461
10.

Beware! Reduced Functional Capacity and Quality of Life with Increased Fatigue Level among the Breast Cancer Survivors Undergoing Chemotherapy in India.

Ramachandran S, Sudhakar S, Thaslim F, Kirthika SV, Padmanabhan K, Samuel AJ.

Indian J Palliat Care. 2018 Jan-Mar;24(1):117-118. doi: 10.4103/IJPC.IJPC_170_17. No abstract available.

11.

Regarding "Otoacoustic Emissions in Rural Nicaragua: Cost Analysis and Implications for Newborn Hearing Screening".

Pulimoottil DT, Padmanabhan K.

Otolaryngol Head Neck Surg. 2018 Jan;158(1):197. doi: 10.1177/0194599817722960. No abstract available.

PMID:
29297270
12.

Regarding "Accuracy of Ultrasonography and Computed Tomography in the Evaluation of Patients Undergoing Sialendoscopy for Sialolithiasis".

Padmanabhan K, Pulimoottil DT.

Otolaryngol Head Neck Surg. 2017 Nov;157(5):910-911. doi: 10.1177/0194599817721139. No abstract available.

PMID:
29090645
13.

Toward Personalized Network Biomarkers in Alzheimer's Disease: Computing Individualized Genomic and Protein Crosstalk Maps.

Padmanabhan K, Shpanskaya K, Bello G, Doraiswamy PM, Samatova NF.

Front Aging Neurosci. 2017 Sep 26;9:315. doi: 10.3389/fnagi.2017.00315. eCollection 2017. No abstract available.

14.

Desynchronization of Circadian Clocks in Cancer: A Metabolic and Epigenetic Connection.

Padmanabhan K, Billaud M.

Front Endocrinol (Lausanne). 2017 Jun 19;8:136. doi: 10.3389/fendo.2017.00136. eCollection 2017. Review.

15.

T-plastin is essential for basement membrane assembly and epidermal morphogenesis.

Dor-On E, Raviv S, Cohen Y, Adir O, Padmanabhan K, Luxenburg C.

Sci Signal. 2017 May 30;10(481). pii: eaal3154. doi: 10.1126/scisignal.aal3154.

PMID:
28559444
16.

Histone H3.3 regulates mitotic progression in mouse embryonic fibroblasts.

Ors A, Papin C, Favier B, Roulland Y, Dalkara D, Ozturk M, Hamiche A, Dimitrov S, Padmanabhan K.

Biochem Cell Biol. 2017 Aug;95(4):491-499. doi: 10.1139/bcb-2016-0190. Epub 2017 Feb 1.

PMID:
28177753
17.
18.

Correction for Pradeep et al., Draft Genome Sequence of Elizabethkingia anopheles, Isolated from a Postoperative Endophthalmitis Patient.

Pradeep BE, Mahalingam N, Manivannan B, Padmanabhan K, Nilawe P, Gurung G, Chhabra A, Nagaraja V.

Genome Announc. 2016 Dec 8;4(6). pii: e01372-16. doi: 10.1128/genomeA.01372-16. No abstract available.

19.

The Flexible Ends of CENP-A Nucleosome Are Required for Mitotic Fidelity.

Roulland Y, Ouararhni K, Naidenov M, Ramos L, Shuaib M, Syed SH, Lone IN, Boopathi R, Fontaine E, Papai G, Tachiwana H, Gautier T, Skoufias D, Padmanabhan K, Bednar J, Kurumizaka H, Schultz P, Angelov D, Hamiche A, Dimitrov S.

Mol Cell. 2016 Aug 18;63(4):674-685. doi: 10.1016/j.molcel.2016.06.023. Epub 2016 Aug 4.

20.

Diverse Representations of Olfactory Information in Centrifugal Feedback Projections.

Padmanabhan K, Osakada F, Tarabrina A, Kizer E, Callaway EM, Gage FH, Sejnowski TJ.

J Neurosci. 2016 Jul 13;36(28):7535-45. doi: 10.1523/JNEUROSCI.3358-15.2016.

21.

Altered proliferation and networks in neural cells derived from idiopathic autistic individuals.

Marchetto MC, Belinson H, Tian Y, Freitas BC, Fu C, Vadodaria K, Beltrao-Braga P, Trujillo CA, Mendes APD, Padmanabhan K, Nunez Y, Ou J, Ghosh H, Wright R, Brennand K, Pierce K, Eichenfield L, Pramparo T, Eyler L, Barnes CC, Courchesne E, Geschwind DH, Gage FH, Wynshaw-Boris A, Muotri AR.

Mol Psychiatry. 2017 Jun;22(6):820-835. doi: 10.1038/mp.2016.95. Epub 2016 Jul 5.

22.

Compliance with infection control practices in sputum microscopy centres: a study from Kerala, India.

Aslesh OP, Ubaid NP, Nagaraja SB, Shewade HD, Padmanabhan KV, Naik BR, Satpati M, Blesson S, Jayasree AK.

Public Health Action. 2015 Dec 21;5(4):255-60. doi: 10.5588/pha.15.0053.

23.

An Empirical Model for Reliable Spiking Activity.

Wang W, Tripathy SJ, Padmanabhan K, Urban NN, Kass RE.

Neural Comput. 2015 Aug;27(8):1609-23. doi: 10.1162/NECO_a_00754. Epub 2015 Jun 16.

24.

A novel Monoclonal Antibody against Notch1 Targets Leukemia-associated Mutant Notch1 and Depletes Therapy Resistant Cancer Stem Cells in Solid Tumors.

Sharma A, Gadkari RA, Ramakanth SV, Padmanabhan K, Madhumathi DS, Devi L, Appaji L, Aster JC, Rangarajan A, Dighe RR.

Sci Rep. 2015 Jun 5;5:11012. doi: 10.1038/srep11012.

25.

In vitro myelin formation using embryonic stem cells.

Kerman BE, Kim HJ, Padmanabhan K, Mei A, Georges S, Joens MS, Fitzpatrick JA, Jappelli R, Chandross KJ, August P, Gage FH.

Development. 2015 Jun 15;142(12):2213-25. doi: 10.1242/dev.116517. Epub 2015 May 26.

26.

Draft Genome Sequence of Elizabethkingia meningoseptica, Isolated from a Postoperative Endophthalmitis Patient.

Pradeep BE, Mahalingam N, Manivannan B, Padmanabhan K, Nilawe P, Gurung G, Chhabra A, Nagaraja V.

Genome Announc. 2014 Dec 24;2(6). pii: e01335-14. doi: 10.1128/genomeA.01335-14. Erratum in: Genome Announc. 2016 Dec 8;4(6):.

27.

On the structure of grain/interphase boundaries and interfaces.

Padmanabhan KA, Gleiter H.

Beilstein J Nanotechnol. 2014 Sep 22;5:1603-15. doi: 10.3762/bjnano.5.172. eCollection 2014. Review.

28.

Disrupting information coding via block of 4-AP-sensitive potassium channels.

Padmanabhan K, Urban NN.

J Neurophysiol. 2014 Sep 1;112(5):1054-66. doi: 10.1152/jn.00823.2013. Epub 2014 Jun 3.

29.

ANP32E is a histone chaperone that removes H2A.Z from chromatin.

Obri A, Ouararhni K, Papin C, Diebold ML, Padmanabhan K, Marek M, Stoll I, Roy L, Reilly PT, Mak TW, Dimitrov S, Romier C, Hamiche A.

Nature. 2014 Jan 30;505(7485):648-53. doi: 10.1038/nature12922. Epub 2014 Jan 22.

PMID:
24463511
30.

1-Aminocyclopropane-1-carboxylic acid oxidase reaction mechanism and putative post-translational activities of the ACCO protein.

Dilley DR, Wang Z, Kadirjan-Kalbach DK, Ververidis F, Beaudry R, Padmanabhan K.

AoB Plants. 2013;5:plt031. doi: 10.1093/aobpla/plt031. Epub 2013 Oct 25.

31.

Complex biomarker discovery in neuroimaging data: Finding a needle in a haystack.

Atluri G, Padmanabhan K, Fang G, Steinbach M, Petrella JR, Lim K, Macdonald A 3rd, Samatova NF, Doraiswamy PM, Kumar V.

Neuroimage Clin. 2013 Aug 7;3:123-31. doi: 10.1016/j.nicl.2013.07.004. Review.

32.

A regenerative approach to the treatment of multiple sclerosis.

Deshmukh VA, Tardif V, Lyssiotis CA, Green CC, Kerman B, Kim HJ, Padmanabhan K, Swoboda JG, Ahmad I, Kondo T, Gage FH, Theofilopoulos AN, Lawson BR, Schultz PG, Lairson LL.

Nature. 2013 Oct 17;502(7471):327-332. doi: 10.1038/nature12647. Epub 2013 Oct 9.

33.

Intermediate intrinsic diversity enhances neural population coding.

Tripathy SJ, Padmanabhan K, Gerkin RC, Urban NN.

Proc Natl Acad Sci U S A. 2013 May 14;110(20):8248-53. doi: 10.1073/pnas.1221214110. Epub 2013 Apr 29.

34.

Structural and functional studies of γ-carboxyglutamic acid domains of factor VIIa and activated Protein C: role of magnesium at physiological calcium.

Vadivel K, Agah S, Messer AS, Cascio D, Bajaj MS, Krishnaswamy S, Esmon CT, Padmanabhan K, Bajaj SP.

J Mol Biol. 2013 Jun 12;425(11):1961-1981. doi: 10.1016/j.jmb.2013.02.017. Epub 2013 Feb 20.

35.

Feedback regulation of transcriptional termination by the mammalian circadian clock PERIOD complex.

Padmanabhan K, Robles MS, Westerling T, Weitz CJ.

Science. 2012 Aug 3;337(6094):599-602. doi: 10.1126/science.1221592. Epub 2012 Jul 5.

36.

In-silico identification of phenotype-biased functional modules.

Padmanabhan K, Wilson K, Rocha AM, Wang K, Mihelcic JR, Samatova NF.

Proteome Sci. 2012 Jun 21;10 Suppl 1:S2. doi: 10.1186/1477-5956-10-S1-S2.

37.

NIBBS-search for fast and accurate prediction of phenotype-biased metabolic systems.

Schmidt MC, Rocha AM, Padmanabhan K, Shpanskaya Y, Banfield J, Scott K, Mihelcic JR, Samatova NF.

PLoS Comput Biol. 2012;8(5):e1002490. doi: 10.1371/journal.pcbi.1002490. Epub 2012 May 10.

38.

SPICE: discovery of phenotype-determining component interplays.

Chen Z, Padmanabhan K, Rocha AM, Shpanskaya Y, Mihelcic JR, Scott K, Samatova NF.

BMC Syst Biol. 2012 May 14;6:40. doi: 10.1186/1752-0509-6-40.

39.

Functional annotation of hierarchical modularity.

Padmanabhan K, Wang K, Samatova NF.

PLoS One. 2012;7(4):e33744. doi: 10.1371/journal.pone.0033744. Epub 2012 Apr 4.

40.

Efficient α, β-motif finder for identification of phenotype-related functional modules.

Schmidt MC, Rocha AM, Padmanabhan K, Chen Z, Scott K, Mihelcic JR, Samatova NF.

BMC Bioinformatics. 2011 Nov 11;12:440. doi: 10.1186/1471-2105-12-440.

41.

DENSE: efficient and prior knowledge-driven discovery of phenotype-associated protein functional modules.

Hendrix W, Rocha AM, Padmanabhan K, Choudhary A, Scott K, Mihelcic JR, Samatova NF.

BMC Syst Biol. 2011 Oct 24;5:172. doi: 10.1186/1752-0509-5-172.

42.

Multi-photon imaging.

Padmanabhan K, Andrews SE, Fitzpatrick JA.

Curr Protoc Cytom. 2010 Oct;Chapter 2:Unit2.9. doi: 10.1002/0471142956.cy0209s54.

PMID:
20938919
43.

HAM-D17 and HAM-D6 sensitivity to change in relation to desvenlafaxine dose and baseline depression severity in major depressive disorder.

Bech P, Boyer P, Germain JM, Padmanabhan K, Haudiquet V, Pitrosky B, Tourian KA.

Pharmacopsychiatry. 2010 Nov;43(7):271-6. doi: 10.1055/s-0030-1263173. Epub 2010 Sep 9.

PMID:
20830664
44.

A novel algorithm for optimal image thresholding of biological data.

Padmanabhan K, Eddy WF, Crowley JC.

J Neurosci Methods. 2010 Nov 30;193(2):380-4. doi: 10.1016/j.jneumeth.2010.08.031. Epub 2010 Sep 15.

PMID:
20817033
45.

Intrinsic biophysical diversity decorrelates neuronal firing while increasing information content.

Padmanabhan K, Urban NN.

Nat Neurosci. 2010 Oct;13(10):1276-82. doi: 10.1038/nn.2630. Epub 2010 Aug 29.

46.

A simple method of in vitro electroporation allows visualization, recording, and calcium imaging of local neuronal circuits.

Hovis KR, Padmanabhan K, Urban NN.

J Neurosci Methods. 2010 Aug 15;191(1):1-10. doi: 10.1016/j.jneumeth.2010.05.017.

47.

Retrospective analysis of suicidality in patients treated with the antidepressant desvenlafaxine.

Tourian KA, Padmanabhan K, Groark J, Ninan PT.

J Clin Psychopharmacol. 2010 Aug;30(4):411-6. doi: 10.1097/JCP.0b013e3181e6d686.

PMID:
20631558
48.

Comment on 'standards on restoratives'.

Padmanabhan K.

Indian J Dent Res. 2009 Oct-Dec;20(4):516. doi: 10.4103/0970-9290.59429. No abstract available.

49.

Identification of RACK1 and protein kinase Calpha as integral components of the mammalian circadian clock.

Robles MS, Boyault C, Knutti D, Padmanabhan K, Weitz CJ.

Science. 2010 Jan 22;327(5964):463-6. doi: 10.1126/science.1180067.

50.

Withanamides in Withania somnifera fruit protect PC-12 cells from beta-amyloid responsible for Alzheimer's disease.

Jayaprakasam B, Padmanabhan K, Nair MG.

Phytother Res. 2010 Jun;24(6):859-63. doi: 10.1002/ptr.3033.

PMID:
19957250

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