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Items: 1 to 50 of 119

1.

Genome Sequence of Rhodococcus erythropolis Strain CCM2595, a Phenol Derivative-Degrading Bacterium.

Strnad H, Patek M, Fousek J, Szokol J, Ulbrich P, Nesvera J, Paces V, Vlcek C.

Genome Announc. 2014 Mar 20;2(2). pii: e00208-14. doi: 10.1128/genomeA.00208-14.

2.

Characterization of pbt genes conferring increased Pb2+ and Cd2+ tolerance upon Achromobacter xylosoxidans A8.

Hložková K, Suman J, Strnad H, Ruml T, Paces V, Kotrba P.

Res Microbiol. 2013 Dec;164(10):1009-18. doi: 10.1016/j.resmic.2013.10.002. Epub 2013 Oct 12.

PMID:
24125695
3.

New insight into transcription of human endogenous retroviral elements.

Pačes J, Huang YT, Pačes V, Rídl J, Chang CM.

N Biotechnol. 2013 Mar 25;30(3):314-8. doi: 10.1016/j.nbt.2012.11.009. Epub 2012 Nov 29. Review.

PMID:
23201072
4.

Diversity, phylogeny and expression patterns of Pou and Six homeodomain transcription factors in hydrozoan jellyfish Craspedacusta sowerbyi.

Hroudova M, Vojta P, Strnad H, Krejcik Z, Ridl J, Paces J, Vlcek C, Paces V.

PLoS One. 2012;7(4):e36420. doi: 10.1371/journal.pone.0036420. Epub 2012 Apr 30.

5.

Complete genome sequence of the haloaromatic acid-degrading bacterium Achromobacter xylosoxidans A8.

Strnad H, Ridl J, Paces J, Kolar M, Vlcek C, Paces V.

J Bacteriol. 2011 Feb;193(3):791-2. doi: 10.1128/JB.01299-10. Epub 2010 Nov 19.

6.

Complete genome sequence of the photosynthetic purple nonsulfur bacterium Rhodobacter capsulatus SB 1003.

Strnad H, Lapidus A, Paces J, Ulbrich P, Vlcek C, Paces V, Haselkorn R.

J Bacteriol. 2010 Jul;192(13):3545-6. doi: 10.1128/JB.00366-10. Epub 2010 Apr 23.

7.

Loss of the response regulator CtrA causes pleiotropic effects on gene expression but does not affect growth phase regulation in Rhodobacter capsulatus.

Mercer RG, Callister SJ, Lipton MS, Pasa-Tolic L, Strnad H, Paces V, Beatty JT, Lang AS.

J Bacteriol. 2010 Jun;192(11):2701-10. doi: 10.1128/JB.00160-10. Epub 2010 Apr 2.

8.

Czech bibliometric system fosters mediocre research.

Konvalinka J, Illnerová H, Hobza P, Horejsí V, Holý A, Jungwirth P, Paces V, Martásek P, Zlatuska J.

Nature. 2009 Aug 27;460(7259):1079. doi: 10.1038/4601079c. No abstract available.

PMID:
19713911
9.

Biphenyl-metabolizing bacteria in the rhizosphere of horseradish and bulk soil contaminated by polychlorinated biphenyls as revealed by stable isotope probing.

Uhlik O, Jecna K, Mackova M, Vlcek C, Hroudova M, Demnerova K, Paces V, Macek T.

Appl Environ Microbiol. 2009 Oct;75(20):6471-7. doi: 10.1128/AEM.00466-09. Epub 2009 Aug 21.

10.

Genomics in the Czech Republic.

Paçes V.

Comp Funct Genomics. 2003;4(5):518-9. doi: 10.1002/cfg.327. No abstract available.

11.

Assembly of the cnidarian camera-type eye from vertebrate-like components.

Kozmik Z, Ruzickova J, Jonasova K, Matsumoto Y, Vopalensky P, Kozmikova I, Strnad H, Kawamura S, Piatigorsky J, Paces V, Vlcek C.

Proc Natl Acad Sci U S A. 2008 Jul 1;105(26):8989-93. doi: 10.1073/pnas.0800388105. Epub 2008 Jun 24.

12.

Sulfoacetate released during the assimilation of taurine-nitrogen by Neptuniibacter caesariensis: purification of sulfoacetaldehyde dehydrogenase.

Krejcík Z, Denger K, Weinitschke S, Hollemeyer K, Paces V, Cook AM, Smits TH.

Arch Microbiol. 2008 Aug;190(2):159-68. doi: 10.1007/s00203-008-0386-2. Epub 2008 May 28.

PMID:
18506422
13.

Nucleotide sequence, organization and characterization of the (halo)aromatic acid catabolic plasmid pA81 from Achromobacter xylosoxidans A8.

Jencova V, Strnad H, Chodora Z, Ulbrich P, Vlcek C, Hickey WJ, Paces V.

Res Microbiol. 2008 Mar;159(2):118-27. doi: 10.1016/j.resmic.2007.11.018. Epub 2007 Dec 8.

PMID:
18249097
14.

Cubozoan crystallins: evidence for convergent evolution of pax regulatory sequences.

Kozmik Z, Swamynathan SK, Ruzickova J, Jonasova K, Paces V, Vlcek C, Piatigorsky J.

Evol Dev. 2008 Jan-Feb;10(1):52-61. doi: 10.1111/j.1525-142X.2007.00213.x.

PMID:
18184357
15.

Retroposition of processed pseudogenes: the impact of RNA stability and translational control.

Pavlicek A, Gentles AJ, Paces J, Paces V, Jurka J.

Trends Genet. 2006 Feb;22(2):69-73. Epub 2005 Dec 13. Review.

16.

The Rhodobacter capsulatus genome.

Haselkorn R, Lapidus A, Kogan Y, Vlcek C, Paces J, Paces V, Ulbrich P, Pecenkova T, Rebrekov D, Milgram A, Mazur M, Cox R, Kyrpides N, Ivanova N, Kapatral V, Los T, Lykidis A, Mikhailova N, Reznik G, Vasieva O, Fonstein M.

Photosynth Res. 2001;70(1):43-52.

PMID:
16228361
17.
18.

Global transcriptome analysis of the C57BL/6J mouse testis by SAGE: evidence for nonrandom gene order.

Divina P, Vlcek C, Strnad P, Paces V, Forejt J.

BMC Genomics. 2005 Mar 5;6:29.

19.

Improved synthesis, antibacterial activity and potential carcinogenicity of 5-amino-1 ,2,4-thiadiazol-3(2H)-one.

Pískala A, Vachálková A, Masojídková M, Horváthová K, Ovesná Z, Paces V, Novotný L.

Pharmazie. 2004 Oct;59(10):756-62.

PMID:
15544053
20.
21.

WAViS server for handling, visualization and presentation of multiple alignments of nucleotide or amino acids sequences.

Zika R, Paces J, Pavlícek A, Paces V.

Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W48-9.

22.

Representing GC variation along eukaryotic chromosomes.

Paces J, Zíka R, Paces V, Pavlícek A, Clay O, Bernardi G.

Gene. 2004 May 26;333:135-41.

PMID:
15177688
23.

HERVd: the Human Endogenous RetroViruses Database: update.

Paces J, Pavlícek A, Zika R, Kapitonov VV, Jurka J, Paces V.

Nucleic Acids Res. 2004 Jan 1;32(Database issue):D50.

24.
25.

DicodonUse: the programme for dicodon bias visualization in prokaryotes.

Paces J, Paces V.

Folia Biol (Praha). 2002;48(6):246-9.

PMID:
12512801
26.

Cloning and expression of PARP-3 (Adprt3) and U3-55k, two genes closely linked on mouse chromosome 9.

Urbánek P, Paces J, Králová J, Dvorák M, Paces V.

Folia Biol (Praha). 2002;48(5):182-91.

PMID:
12448766
27.

Genetic determination of polyhydroxyalkanoate metabolism in Rhodobacter capsulatus SB1003.

Ulbrich P, Strnad H, Hejkalová V, Paces J, Paces V.

Folia Biol (Praha). 2002;48(4):157-9.

PMID:
12194204
28.

Ptprj is a candidate for the mouse colon-cancer susceptibility locus Scc1 and is frequently deleted in human cancers.

Ruivenkamp CA, van Wezel T, Zanon C, Stassen AP, Vlcek C, Csikós T, Klous AM, Tripodis N, Perrakis A, Boerrigter L, Groot PC, Lindeman J, Mooi WJ, Meijjer GA, Scholten G, Dauwerse H, Paces V, van Zandwijk N, van Ommen GJ, Demant P.

Nat Genet. 2002 Jul;31(3):295-300. Epub 2002 Jun 24.

PMID:
12089527
29.

HERVd: database of human endogenous retroviruses.

Paces J, Pavlícek A, Paces V.

Nucleic Acids Res. 2002 Jan 1;30(1):205-6.

30.

Similar integration but different stability of Alus and LINEs in the human genome.

Pavlícek A, Jabbari K, Paces J, Paces V, Hejnar JV, Bernardi G.

Gene. 2001 Oct 3;276(1-2):39-45.

PMID:
11591470
31.

Genomics on the eve of the 21st century.

Paces V.

Folia Biol (Praha). 1999;45(5):167-72. No abstract available.

PMID:
10730884
32.

Molecular cloning and expression of the human and mouse homologues of the Drosophila dachshund gene.

Kozmik Z, Pfeffer P, Kralova J, Paces J, Paces V, Kalousova A, Cvekl A.

Dev Genes Evol. 1999 Sep;209(9):537-45.

PMID:
10502110
33.

DNA binding and transactivating properties of the paired and homeobox protein Pax4.

Kalousová A, Benes V, Paces J, Paces V, Kozmik Z.

Biochem Biophys Res Commun. 1999 Jun 16;259(3):510-8.

PMID:
10364449
35.

The human cystathionine beta-synthase (CBS) gene: complete sequence, alternative splicing, and polymorphisms.

Kraus JP, Oliveriusová J, Sokolová J, Kraus E, Vlcek C, de Franchis R, Maclean KN, Bao L, Bukovsk, Patterson D, Paces V, Ansorge W, Kozich V.

Genomics. 1998 Sep 15;52(3):312-24.

PMID:
9790750
36.

Identification and tissue distribution of human cystathionine beta-synthase mRNA isoforms.

Bao L, Vlcek C, Paces V, Kraus JP.

Arch Biochem Biophys. 1998 Feb 1;350(1):95-103.

PMID:
9466825
37.

Bacteriophage B103: complete DNA sequence of its genome and relationship to other Bacillus phages.

Pecenková T, Benes V, Paces J, Vlcek C, Paces V.

Gene. 1997 Oct 15;199(1-2):157-63.

PMID:
9358052
38.

Sequence of a 189-kb segment of the chromosome of Rhodobacter capsulatus SB1003.

Vlcek C, Paces V, Maltsev N, Paces J, Haselkorn R, Fonstein M.

Proc Natl Acad Sci U S A. 1997 Aug 19;94(17):9384-8.

39.

DNA sequencing and analysis of 130 kb from yeast chromosome XV.

Voss H, Benes V, Andrade MA, Valencia A, Rechmann S, Teodoru C, Schwager C, Paces V, Sander C, Ansorge W.

Yeast. 1997 Jun 15;13(7):655-72.

41.

Gene contents in a 31-kb segment at the left genome end of bovine herpesvirus-1.

Schwyzer M, Styger D, Vogt B, Lowery DE, Simard C, LaBoissière S, Misra V, Vlĉek C, Paĉes V.

Vet Microbiol. 1996 Nov;53(1-2):67-77. Review.

PMID:
9010999
42.

Sequencing and analysis of 51 kb on the right arm of chromosome XV from Saccharomyces cerevisiae reveals 30 open reading frames.

Wiemann S, Rechmann S, Benes V, Voss H, Schwager C, Vlcek C, Stegemann J, Zimmermann J, Erfle H, Paces V, Ansorge W.

Yeast. 1996 Mar 15;12(3):281-8.

43.
44.
45.

Promoter, spliced leader, and coding sequence for BICP4, the largest of the immediate-early proteins of bovine herpesvirus 1.

Schwyzer M, Vlcek C, Menekse O, Fraefel C, Paces V.

Virology. 1993 Nov;197(1):349-57.

PMID:
8212570
46.

M13 and pUC vectors with new unique restriction sites for cloning.

Benes V, Hostomský Z, Arnold L, Paces V.

Gene. 1993 Aug 16;130(1):151-2.

PMID:
8393824
47.
48.
50.

Protein-binding A + T-rich motifs flank the duck beta A-globin enhancer.

Cvekl A, Horská K, Vlcek C, Paces V.

Gene. 1991 Jul 22;103(2):253-7.

PMID:
1889750

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