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Items: 49


Genetic Characterization and Enhanced Surveillance of Ceftriaxone-Resistant Neisseria gonorrhoeae Strain, Alberta, Canada, 2018.

Berenger BM, Demczuk W, Gratrix J, Pabbaraju K, Smyczek P, Martin I.

Emerg Infect Dis. 2019 Sep;25(9):1660-1667. doi: 10.3201/eid2509.190407. Epub 2019 Sep 17.


Emergence of a Novel Recombinant Norovirus GII.P16-GII.12 Strain Causing Gastroenteritis, Alberta, Canada.

Pabbaraju K, Wong AA, Tipples GA, Pang XL.

Emerg Infect Dis. 2019 Aug;25(8):1556-1559. doi: 10.3201/eid2508.190059.


Case Report: Bartonella quintana Endocarditis Outside of the Europe-African Gradient: Comprehensive Review of Cases within North America.

Lam JC, Fonseca K, Pabbaraju K, Meatherall BL.

Am J Trop Med Hyg. 2019 May;100(5):1125-1129. doi: 10.4269/ajtmh.18-0929. Review.


Changes in norovirus genotype diversity in gastroenteritis outbreaks in Alberta, Canada: 2012-2018.

Hasing ME, Lee BE, Qiu Y, Xia M, Pabbaraju K, Wong A, Tipples G, Jiang X, Pang XL.

BMC Infect Dis. 2019 Feb 19;19(1):177. doi: 10.1186/s12879-019-3792-y.


Simultaneous Detection and Differentiation between Wild-Type and Vaccine Measles Viruses by a Multiplex Real-Time Reverse Transcription-PCR Assay.

Pabbaraju K, Gill K, Wong AA, Tipples GA, Hiebert J, Severini A, Fonseca K, Tellier R.

J Clin Microbiol. 2019 Mar 28;57(4). pii: e01828-18. doi: 10.1128/JCM.01828-18. Print 2019 Apr.


Genetic characterization of measles virus genotype D6 subacute sclerosing panencephalitis case, Alberta, Canada.

Pabbaraju K, Fonseca K, Wong S, Koch MW, Joseph JT, Tipples GA, Tellier R.

J Neurovirol. 2018 Dec;24(6):720-729. doi: 10.1007/s13365-018-0668-7. Epub 2018 Oct 5.


Use of the APTIMA Combo 2 Assay and a Secondary Algorithm to Detect and Confirm Chlamydia trachomatis in Rectal-Only Infections.

Pabbaraju K, Wong S, Gill K, Severini A, Roy F, Gratrix J, Singh AE, Naidu P, Read R, Drews SJ.

Sex Transm Dis. 2017 Feb;44(2):118-119. doi: 10.1097/OLQ.0000000000000552.


Simultaneous detection of Zika, Chikungunya and Dengue viruses by a multiplex real-time RT-PCR assay.

Pabbaraju K, Wong S, Gill K, Fonseca K, Tipples GA, Tellier R.

J Clin Virol. 2016 Oct;83:66-71. doi: 10.1016/j.jcv.2016.09.001. Epub 2016 Sep 1.


Oseltamivir resistance in an influenza A (H3N2) virus isolated from an immunocompromised patient during the 2014-2015 influenza season in Alberta, Canada.

Chaudhry A, Bastien N, Li Y, Scott A, Pabbaraju K, Stewart D, Wong S, Drews SJ.

Influenza Other Respir Viruses. 2016 Nov;10(6):532-535. doi: 10.1111/irv.12415. Epub 2016 Aug 8.


Integrated sample-to-detection chip for nucleic acid test assays.

Prakash R, Pabbaraju K, Wong S, Tellier R, Kaler KV.

Biomed Microdevices. 2016 Jun;18(3):44. doi: 10.1007/s10544-016-0069-8.


Subacute sclerosing panencephalitis in pregnancy.

Chiu MH, Meatherall B, Nikolic A, Cannon K, Fonseca K, Joseph JT, MacDonald J, Pabbaraju K, Tellier R, Wong S, Koch MW.

Lancet Infect Dis. 2016 Mar;16(3):366-75. doi: 10.1016/S1473-3099(15)00524-1. Epub 2016 Jan 20. Review.


Development of a multiplex real-time PCR for the simultaneous detection of herpes simplex and varicella zoster viruses in cerebrospinal fluid and lesion swab specimens.

Wong AA, Pabbaraju K, Wong S, Tellier R.

J Virol Methods. 2016 Mar;229:16-23. doi: 10.1016/j.jviromet.2015.12.009. Epub 2015 Dec 19.


Full genome analysis of enterovirus D-68 strains circulating in Alberta, Canada.

Pabbaraju K, Wong S, Drews SJ, Tipples G, Tellier R.

J Med Virol. 2016 Jul;88(7):1194-203. doi: 10.1002/jmv.24444. Epub 2015 Dec 22.


Placental Massive Perivillous Fibrinoid Deposition Associated with Coxsackievirus A16-Report of a Case, and Review of the Literature.

Heller DS, Tellier R, Pabbaraju K, Wong S, Faye-Petersen OM, Muehlenbachs A, Goldsmith C, Denison A, Zaki SR.

Pediatr Dev Pathol. 2016 Sep/Oct;19(5):421-423. Epub 2015 Nov 10. Review.


Surveillance summary of hospitalized pediatric enterovirus D68 cases in Canada, September 2014.

Edwin JJ, Domingo FR, Booth TF, Mersereau T, Skowronski DM, Chambers C, Simmonds K, Scott AN, Winter AL, Peci A, Gubbay J, Drews SJ, Krajden M, Karnauchow T, Smieja M, Rempel S, Murti M, Pollock S, Gustafson R, Hoyano D, Allison S, Fathima S, Pabbaraju K, Wong S, Tellier R, Tipples G, Gad RR, Mukhi SN, Jafari Y, Grudeski E, McDermid A, Wong T.

Can Commun Dis Rep. 2015 Feb 20;41(Suppl 1):2-8. doi: 10.14745/ccdr.v41is1a01. eCollection 2015 Feb 20.


Detection of enteroviruses and parechoviruses by a multiplex real-time RT-PCR assay.

Pabbaraju K, Wong S, Wong AA, Tellier R.

Mol Cell Probes. 2015 Apr;29(2):81-5. doi: 10.1016/j.mcp.2015.02.001. Epub 2015 Feb 11.


Characterization of enterovirus activity, including that of enterovirus D68, in pediatric patients in Alberta, Canada, in 2014.

Drews SJ, Simmonds K, Usman HR, Yee K, Fathima S, Tipples G, Tellier R, Pabbaraju K, Wong S, Talbot J.

J Clin Microbiol. 2015 Mar;53(3):1042-5. doi: 10.1128/JCM.02982-14. Epub 2015 Jan 14. No abstract available.


First case of Zika virus infection in a returning Canadian traveler.

Fonseca K, Meatherall B, Zarra D, Drebot M, MacDonald J, Pabbaraju K, Wong S, Webster P, Lindsay R, Tellier R.

Am J Trop Med Hyg. 2014 Nov;91(5):1035-8. doi: 10.4269/ajtmh.14-0151. Epub 2014 Oct 6.


The need for a sequencing-based assay to supplement the Abbott m2000 RealTime HCV Genotype II assay: a 1 year analysis.

Benedet M, Adachi D, Wong A, Wong S, Pabbaraju K, Tellier R, Tang JW.

J Clin Virol. 2014 Jul;60(3):301-4. doi: 10.1016/j.jcv.2014.04.005. Epub 2014 Apr 14.


Full-genome analysis of avian influenza A(H5N1) virus from a human, North America, 2013.

Pabbaraju K, Tellier R, Wong S, Li Y, Bastien N, Tang JW, Drews SJ, Jang Y, Davis CT, Fonseca K, Tipples GA.

Emerg Infect Dis. 2014 May;20(5):887-91. doi: 10.3201/eid2005.140164.


Utility of specimens positive for Neisseria gonorrhoeae by the Aptima Combo 2 assay for assessment of strain diversity and antibiotic resistance.

Pabbaraju K, Wong S, Song JJ, Singh AE, Read R, Drews SJ.

J Clin Microbiol. 2013 Dec;51(12):4156-60. doi: 10.1128/JCM.01694-13. Epub 2013 Oct 9.


A cost effective real-time PCR for the detection of adenovirus from viral swabs.

Al-Siyabi T, Binkhamis K, Wilcox M, Wong S, Pabbaraju K, Tellier R, Hatchette TF, LeBlanc JJ.

Virol J. 2013 Jun 7;10:184. doi: 10.1186/1743-422X-10-184.


Genetic characterization of a Coxsackie A9 virus associated with aseptic meningitis in Alberta, Canada in 2010.

Pabbaraju K, Wong S, Chan EN, Tellier R.

Virol J. 2013 Mar 22;10:93. doi: 10.1186/1743-422X-10-93.


Detection of influenza C virus by a real-time RT-PCR assay.

Pabbaraju K, Wong S, Wong A, May-Hadford J, Tellier R, Fonseca K.

Influenza Other Respir Viruses. 2013 Nov;7(6):954-60. doi: 10.1111/irv.12099. Epub 2013 Feb 27.


Longitudinal study of influenza molecular viral shedding in Hutterite communities.

Loeb M, Singh PK, Fox J, Russell ML, Pabbaraju K, Zarra D, Wong S, Neupane B, Singh P, Webby R, Fonseca K.

J Infect Dis. 2012 Oct 1;206(7):1078-84. doi: 10.1093/infdis/jis450. Epub 2012 Jul 26.


Pre-analytical and analytical procedures for the detection of enteric viruses and enterovirus in water samples.

Pang XL, Lee BE, Pabbaraju K, Gabos S, Craik S, Payment P, Neumann N.

J Virol Methods. 2012 Sep;184(1-2):77-83. doi: 10.1016/j.jviromet.2012.05.014. Epub 2012 May 23.


A miniaturized and integrated gel post platform for multiparameter PCR detection of herpes simplex viruses from raw genital swabs.

Manage DP, Lauzon J, Atrazhev A, Morrissey YC, Edwards AL, Stickel AJ, Crabtree HJ, Pabbaraju K, Zahariadis G, Yanow SK, Pilarski LM.

Lab Chip. 2012 May 7;12(9):1664-71. doi: 10.1039/c2lc40061h. Epub 2012 Mar 19.


Comparison of the hybrid capture 2 and cobas 4800 tests for detection of high-risk human papillomavirus in specimens collected in PreservCyt medium.

Wong AA, Fuller J, Pabbaraju K, Wong S, Zahariadis G.

J Clin Microbiol. 2012 Jan;50(1):25-9. doi: 10.1128/JCM.05400-11. Epub 2011 Nov 16.


Distribution and phylogenetic comparisons of a novel mosquito flavivirus sequence present in Culex tarsalis Mosquitoes from western Canada with viruses isolated in California and Colorado.

Tyler S, Bolling BG, Blair CD, Brault AC, Pabbaraju K, Armijos MV, Clark DC, Calisher CH, Drebot MA.

Am J Trop Med Hyg. 2011 Jul;85(1):162-8. doi: 10.4269/ajtmh.2011.10-0469.


Adamantane resistance in seasonal human influenza A viruses from Calgary, Alberta (January 2007 to August 2008).

Pabbaraju K, Wong S, Kits DK, Fox JD.

Can J Infect Dis Med Microbiol. 2010 Summer;21(2):e87-91.


Comparison of the Luminex xTAG respiratory viral panel with xTAG respiratory viral panel fast for diagnosis of respiratory virus infections.

Pabbaraju K, Wong S, Tokaryk KL, Fonseca K, Drews SJ.

J Clin Microbiol. 2011 May;49(5):1738-44. doi: 10.1128/JCM.02090-10. Epub 2011 Mar 16.


Development of a real-time RT-PCR assay for detection of resistance to oseltamivir in influenza A pandemic (H1N1) 2009 virus using single nucleotide polymorphism probes.

Wong S, Pabbaraju K, Wong A, Fonseca K, Drews SJ.

J Virol Methods. 2011 May;173(2):259-65. doi: 10.1016/j.jviromet.2011.02.014. Epub 2011 Feb 22.


Comparison of a singleplex real-time RT-PCR assay and multiplex respiratory viral panel assay for detection of influenza "A" in respiratory specimens.

Pabbaraju K, Wong S, Lee B, Tellier R, Fonseca K, Louie M, Drews SJ.

Influenza Other Respir Viruses. 2011 Mar;5(2):99-103. doi: 10.1111/j.1750-2659.2010.00170.x.


Detection of adenoviruses.

Pabbaraju K, Wong S, Fox JD.

Methods Mol Biol. 2011;665:1-15. doi: 10.1007/978-1-60761-817-1_1.


Surveillance of autopsy cases for D222G substitutions in haemagglutinin of the pandemic (H1N1) 2009 virus in Alberta, Canada.

Drews SJ, Pabbaraju K, Wong S, Tokaryk KL, May-Hadford J, Lee B, Tellier R, Louie M.

Clin Microbiol Infect. 2011 Apr;17(4):582-4. doi: 10.1111/j.1469-0691.2010.03341.x. Epub 2010 Nov 5.


Identification and epidemiology of severe respiratory disease due to novel swine-origin influenza A (H1N1) virus infection in Alberta.

Zahariadis G, Joffe AR, Talbot J, Devilliers A, Campbell P, Pabbaraju K, Wong S, Bastien N, Li Y, Mitchell RL, Pang XL, Yanow S, Chui L, Predy G, Willans D, Lee BE, Preiksaitis JK, Clement B, Jacobs A, Jaipaul J, Fonseca K.

Can J Infect Dis Med Microbiol. 2010 Winter;21(4):e151-7.


Enhanced viral etiological diagnosis of respiratory system infection outbreaks by use of a multitarget nucleic acid amplification assay.

Wong S, Pabbaraju K, Lee BE, Fox JD.

J Clin Microbiol. 2009 Dec;47(12):3839-45. doi: 10.1128/JCM.01469-09. Epub 2009 Oct 14.


Design and validation of real-time reverse transcription-PCR assays for detection of pandemic (H1N1) 2009 virus.

Pabbaraju K, Wong S, Wong AA, Appleyard GD, Chui L, Pang XL, Yanow SK, Fonseca K, Lee BE, Fox JD, Preiksaitis JK.

J Clin Microbiol. 2009 Nov;47(11):3454-60. doi: 10.1128/JCM.01103-09. Epub 2009 Sep 2.


Surveillance of mosquito-borne viruses in Alberta using reverse transcription polymerase chain reaction with generic primers.

Pabbaraju K, Ho KC, Wong S, Fox JD, Kaplen B, Tyler S, Drebot M, Tilley PA.

J Med Entomol. 2009 May;46(3):640-8.


Comparison of the Luminex xTAG respiratory viral panel with in-house nucleic acid amplification tests for diagnosis of respiratory virus infections.

Pabbaraju K, Tokaryk KL, Wong S, Fox JD.

J Clin Microbiol. 2008 Sep;46(9):3056-62. doi: 10.1128/JCM.00878-08. Epub 2008 Jul 16.


Detection of a broad range of human adenoviruses in respiratory tract samples using a sensitive multiplex real-time PCR assay.

Wong S, Pabbaraju K, Pang XL, Lee BE, Fox JD.

J Med Virol. 2008 May;80(5):856-65. doi: 10.1002/jmv.21136.


Adamantane resistance in circulating human influenza A viruses from Alberta, Canada (1970-2007).

Pabbaraju K, Ho KC, Wong S, Shokoples S, Pang XL, Fonseca K, Fox JD.

Antiviral Res. 2008 Aug;79(2):81-6. doi: 10.1016/j.antiviral.2007.12.006. Epub 2008 Jan 11.


Diagnosis and epidemiological studies of human metapneumovirus using real-time PCR.

Pabbaraju K, Wong S, McMillan T, Lee BE, Fox JD.

J Clin Virol. 2007 Nov;40(3):186-92. Epub 2007 Sep 17.


Use of sequence-based typing for investigation of a case of nosocomial legionellosis.

Wong S, Pabbaraju K, Burk VF, Broukhanski GC, Fox J, Louie T, Mah MW, Bernard K, Tilley PA.

J Med Microbiol. 2006 Dec;55(Pt 12):1707-10.


Ordering genes in a flagella pathway by analysis of expression kinetics from living bacteria.

Kalir S, McClure J, Pabbaraju K, Southward C, Ronen M, Leibler S, Surette MG, Alon U.

Science. 2001 Jun 15;292(5524):2080-3.


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