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Items: 36

1.

The Receptor-like Pseudokinase GHR1 Is Required for Stomatal Closure.

Sierla M, Hõrak H, Overmyer K, Waszczak C, Yarmolinsky D, Maierhofer T, Vainonen JP, Salojärvi J, Denessiouk K, Laanemets K, Tõldsepp K, Vahisalu T, Gauthier A, Puukko T, Paulin L, Auvinen P, Geiger D, Hedrich R, Kollist H, Kangasjärvi J.

Plant Cell. 2018 Nov;30(11):2813-2837. doi: 10.1105/tpc.18.00441. Epub 2018 Oct 25.

2.

Arabidopsis MLO2 is a negative regulator of sensitivity to extracellular reactive oxygen species.

Cui F, Wu H, Safronov O, Zhang P, Kumar R, Kollist H, Salojärvi J, Panstruga R, Overmyer K.

Plant Cell Environ. 2018 Apr;41(4):782-796. doi: 10.1111/pce.13144. Epub 2018 Feb 22.

PMID:
29333607
3.

Multiplexed proteome analysis with neutron-encoded stable isotope labeling in cells and mice.

Overmyer KA, Tyanova S, Hebert AS, Westphall MS, Cox J, Coon JJ.

Nat Protoc. 2018 Jan;13(1):293-306. doi: 10.1038/nprot.2017.121. Epub 2018 Jan 11.

4.

The dental calculus metabolome in modern and historic samples.

Velsko IM, Overmyer KA, Speller C, Klaus L, Collins MJ, Loe L, Frantz LAF, Sankaranarayanan K, Lewis CM Jr, Martinez JBR, Chaves E, Coon JJ, Larson G, Warinner C.

Metabolomics. 2017;13(11):134. doi: 10.1007/s11306-017-1270-3. Epub 2017 Oct 3.

5.

Interaction points in plant stress signaling pathways.

Overmyer K, Vuorinen K, Brosché M.

Physiol Plant. 2018 Feb;162(2):191-204. doi: 10.1111/ppl.12639. Epub 2017 Oct 24.

PMID:
28857168
6.

Genome sequencing and population genomic analyses provide insights into the adaptive landscape of silver birch.

Salojärvi J, Smolander OP, Nieminen K, Rajaraman S, Safronov O, Safdari P, Lamminmäki A, Immanen J, Lan T, Tanskanen J, Rastas P, Amiryousefi A, Jayaprakash B, Kammonen JI, Hagqvist R, Eswaran G, Ahonen VH, Serra JA, Asiegbu FO, de Dios Barajas-Lopez J, Blande D, Blokhina O, Blomster T, Broholm S, Brosché M, Cui F, Dardick C, Ehonen SE, Elomaa P, Escamez S, Fagerstedt KV, Fujii H, Gauthier A, Gollan PJ, Halimaa P, Heino PI, Himanen K, Hollender C, Kangasjärvi S, Kauppinen L, Kelleher CT, Kontunen-Soppela S, Koskinen JP, Kovalchuk A, Kärenlampi SO, Kärkönen AK, Lim KJ, Leppälä J, Macpherson L, Mikola J, Mouhu K, Mähönen AP, Niinemets Ü, Oksanen E, Overmyer K, Palva ET, Pazouki L, Pennanen V, Puhakainen T, Poczai P, Possen BJHM, Punkkinen M, Rahikainen MM, Rousi M, Ruonala R, van der Schoot C, Shapiguzov A, Sierla M, Sipilä TP, Sutela S, Teeri TH, Tervahauta AI, Vaattovaara A, Vahala J, Vetchinnikova L, Welling A, Wrzaczek M, Xu E, Paulin LG, Schulman AH, Lascoux M, Albert VA, Auvinen P, Helariutta Y, Kangasjärvi J.

Nat Genet. 2017 Jun;49(6):904-912. doi: 10.1038/ng.3862. Epub 2017 May 8.

PMID:
28481341
7.

The isolation and characterization of resident yeasts from the phylloplane of Arabidopsis thaliana.

Wang K, Sipilä TP, Overmyer K.

Sci Rep. 2016 Dec 22;6:39403. doi: 10.1038/srep39403.

8.

A Dominant Mutation in the HT1 Kinase Uncovers Roles of MAP Kinases and GHR1 in CO2-Induced Stomatal Closure.

Hõrak H, Sierla M, Tõldsepp K, Wang C, Wang YS, Nuhkat M, Valk E, Pechter P, Merilo E, Salojärvi J, Overmyer K, Loog M, Brosché M, Schroeder JI, Kangasjärvi J, Kollist H.

Plant Cell. 2016 Oct;28(10):2493-2509. Epub 2016 Sep 30.

9.

PP2A-B'γ modulates foliar trans-methylation capacity and the formation of 4-methoxy-indol-3-yl-methyl glucosinolate in Arabidopsis leaves.

Rahikainen M, Trotta A, Alegre S, Pascual J, Vuorinen K, Overmyer K, Moffatt B, Ravanel S, Glawischnig E, Kangasjärvi S.

Plant J. 2017 Jan;89(1):112-127. doi: 10.1111/tpj.13326. Epub 2016 Dec 5.

10.

Dissecting Abscisic Acid Signaling Pathways Involved in Cuticle Formation.

Cui F, Brosché M, Lehtonen MT, Amiryousefi A, Xu E, Punkkinen M, Valkonen JP, Fujii H, Overmyer K.

Mol Plant. 2016 Jun 6;9(6):926-38. doi: 10.1016/j.molp.2016.04.001. Epub 2016 Apr 7.

11.

Induction of WNT11 by hypoxia and hypoxia-inducible factor-1α regulates cell proliferation, migration and invasion.

Mori H, Yao Y, Learman BS, Kurozumi K, Ishida J, Ramakrishnan SK, Overmyer KA, Xue X, Cawthorn WP, Reid MA, Taylor M, Ning X, Shah YM, MacDougald OA.

Sci Rep. 2016 Feb 10;6:21520. doi: 10.1038/srep21520.

12.

Integration of photosynthesis, development and stress as an opportunity for plant biology.

Allahverdiyeva Y, Battchikova N, Brosché M, Fujii H, Kangasjärvi S, Mulo P, Mähönen AP, Nieminen K, Overmyer K, Salojärvi J, Wrzaczek M.

New Phytol. 2015 Nov;208(3):647-55. doi: 10.1111/nph.13549. Epub 2015 Jul 14.

13.

Maximal oxidative capacity during exercise is associated with skeletal muscle fuel selection and dynamic changes in mitochondrial protein acetylation.

Overmyer KA, Evans CR, Qi NR, Minogue CE, Carson JJ, Chermside-Scabbo CJ, Koch LG, Britton SL, Pagliarini DJ, Coon JJ, Burant CF.

Cell Metab. 2015 Mar 3;21(3):468-78. doi: 10.1016/j.cmet.2015.02.007.

14.

Impact of anesthesia and euthanasia on metabolomics of mammalian tissues: studies in a C57BL/6J mouse model.

Overmyer KA, Thonusin C, Qi NR, Burant CF, Evans CR.

PLoS One. 2015 Feb 6;10(2):e0117232. doi: 10.1371/journal.pone.0117232. eCollection 2015.

15.

Increased transcriptome sequencing efficiency with modified Mint-2 digestion-ligation protocol.

Kammonen JI, Smolander OP, Sipilä T, Overmyer K, Auvinen P, Paulin L.

Anal Biochem. 2015 May 15;477:38-40. doi: 10.1016/j.ab.2014.12.001. Epub 2014 Dec 13.

PMID:
25513723
16.

Transcriptomics and functional genomics of ROS-induced cell death regulation by RADICAL-INDUCED CELL DEATH1.

Brosché M, Blomster T, Salojärvi J, Cui F, Sipari N, Leppälä J, Lamminmäki A, Tomai G, Narayanasamy S, Reddy RA, Keinänen M, Overmyer K, Kangasjärvi J.

PLoS Genet. 2014 Feb 13;10(2):e1004112. doi: 10.1371/journal.pgen.1004112. eCollection 2014 Feb.

17.

Genetic analysis of a rat model of aerobic capacity and metabolic fitness.

Ren YY, Overmyer KA, Qi NR, Treutelaar MK, Heckenkamp L, Kalahar M, Koch LG, Britton SL, Burant CF, Li JZ.

PLoS One. 2013 Oct 11;8(10):e77588. doi: 10.1371/journal.pone.0077588. eCollection 2013. Erratum in: PLoS One. 2014;9(3):e92345.

18.

Regulation of ABA dependent wound induced spreading cell death by MYB108.

Cui F, Brosché M, Sipari N, Tang S, Overmyer K.

New Phytol. 2013 Nov;200(3):634-40. doi: 10.1111/nph.12456. Epub 2013 Aug 19.

19.

Post mortem function of AtMC9 in xylem vessel elements.

Bollhöner B, Zhang B, Stael S, Denancé N, Overmyer K, Goffner D, Van Breusegem F, Tuominen H.

New Phytol. 2013 Oct;200(2):498-510. doi: 10.1111/nph.12387. Epub 2013 Jul 8.

20.

Genome sequencing of the plant pathogen Taphrina deformans, the causal agent of peach leaf curl.

Cissé OH, Almeida JM, Fonseca A, Kumar AA, Salojärvi J, Overmyer K, Hauser PM, Pagni M.

MBio. 2013 Apr 30;4(3):e00055-13. doi: 10.1128/mBio.00055-13.

21.

Apoplastic reactive oxygen species transiently decrease auxin signaling and cause stress-induced morphogenic response in Arabidopsis.

Blomster T, Salojärvi J, Sipari N, Brosché M, Ahlfors R, Keinänen M, Overmyer K, Kangasjärvi J.

Plant Physiol. 2011 Dec;157(4):1866-83. doi: 10.1104/pp.111.181883. Epub 2011 Oct 17.

22.

The transcription factor interacting protein RCD1 contains a novel conserved domain.

Jaspers P, Brosché M, Overmyer K, Kangasjärvi J.

Plant Signal Behav. 2010 Jan;5(1):78-80.

23.

The RST and PARP-like domain containing SRO protein family: analysis of protein structure, function and conservation in land plants.

Jaspers P, Overmyer K, Wrzaczek M, Vainonen JP, Blomster T, Salojärvi J, Reddy RA, Kangasjärvi J.

BMC Genomics. 2010 Mar 12;11:170. doi: 10.1186/1471-2164-11-170.

24.

Plant ROS and RNS: making plant science more radical than ever.

Wrzaczek M, Overmyer K, Kangasjärvi J.

Physiol Plant. 2010 Apr;138(4):357-9. doi: 10.1111/j.1399-3054.2010.01359.x. Epub 2010 Jan 25. No abstract available.

PMID:
20113433
25.

Contributions of extravascular and intravascular cells to fibrin network formation, structure, and stability.

Campbell RA, Overmyer KA, Selzman CH, Sheridan BC, Wolberg AS.

Blood. 2009 Nov 26;114(23):4886-96. doi: 10.1182/blood-2009-06-228940. Epub 2009 Oct 1.

26.

Unequally redundant RCD1 and SRO1 mediate stress and developmental responses and interact with transcription factors.

Jaspers P, Blomster T, Brosché M, Salojärvi J, Ahlfors R, Vainonen JP, Reddy RA, Immink R, Angenent G, Turck F, Overmyer K, Kangasjärvi J.

Plant J. 2009 Oct;60(2):268-79. doi: 10.1111/j.1365-313X.2009.03951.x. Epub 2009 Jun 22.

27.

Cellular procoagulant activity dictates clot structure and stability as a function of distance from the cell surface.

Campbell RA, Overmyer KA, Bagnell CR, Wolberg AS.

Arterioscler Thromb Vasc Biol. 2008 Dec;28(12):2247-54. doi: 10.1161/ATVBAHA.108.176008. Epub 2008 Oct 30.

28.

Complex phenotypic profiles leading to ozone sensitivity in Arabidopsis thaliana mutants.

Overmyer K, Kollist H, Tuominen H, Betz C, Langebartels C, Wingsle G, Kangasjärvi S, Brader G, Mullineaux P, Kangasjärvi J.

Plant Cell Environ. 2008 Sep;31(9):1237-49. doi: 10.1111/j.1365-3040.2008.01837.x. Epub 2008 Jun 3.

29.

Ozone-induced programmed cell death in the Arabidopsis radical-induced cell death1 mutant.

Overmyer K, Brosché M, Pellinen R, Kuittinen T, Tuominen H, Ahlfors R, Keinänen M, Saarma M, Scheel D, Kangasjärvi J.

Plant Physiol. 2005 Mar;137(3):1092-104. Epub 2005 Feb 22.

30.

Arabidopsis RADICAL-INDUCED CELL DEATH1 belongs to the WWE protein-protein interaction domain protein family and modulates abscisic acid, ethylene, and methyl jasmonate responses.

Ahlfors R, Lång S, Overmyer K, Jaspers P, Brosché M, Tauriainen A, Kollist H, Tuominen H, Belles-Boix E, Piippo M, Inzé D, Palva ET, Kangasjärvi J.

Plant Cell. 2004 Jul;16(7):1925-37. Epub 2004 Jun 18.

31.

Mutual antagonism of ethylene and jasmonic acid regulates ozone-induced spreading cell death in Arabidopsis.

Tuominen H, Overmyer K, Keinänen M, Kollist H, Kangasjärvi J.

Plant J. 2004 Jul;39(1):59-69.

32.

Reactive oxygen species and hormonal control of cell death.

Overmyer K, Brosché M, Kangasjärvi J.

Trends Plant Sci. 2003 Jul;8(7):335-42. Review.

PMID:
12878018
33.

Ozone-sensitive arabidopsis rcd1 mutant reveals opposite roles for ethylene and jasmonate signaling pathways in regulating superoxide-dependent cell death.

Overmyer K, Tuominen H, Kettunen R, Betz C, Langebartels C, Sandermann H Jr, Kangasjärvi J.

Plant Cell. 2000 Oct;12(10):1849-62.

34.

Enrichment of chromosome specific hncDNAs by magnetic bead coupled Alu sequences.

Overmyer K, Müller HW, Gimbel W, Göttert E, Meese E.

Mol Biol Rep. 1995-1996;22(1):53-7.

PMID:
8858573
35.

Isolation and localization of transcribed sequences on human chromosome 22.

Gimbel W, Klein V, Brass N, Fischer U, Piontek K, Overmyer K, Göttert E, Zang KD, Meese E.

Cytogenet Cell Genet. 1995;71(1):81-5.

PMID:
7606934
36.

Generation of a chromosome-22-specific c-DNA library as confirmed by FISH analysis.

Göttert E, Klein V, Piontek K, Overmyer K, Zang KD, Meese E.

Hum Genet. 1993 Dec;92(6):623-6.

PMID:
8262524

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