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Items: 1 to 50 of 90


Soil fertility in boreal forest relates to root-driven nitrogen retention and carbon sequestration in the mor layer.

Kyaschenko J, Ovaskainen O, Ekblad A, Hagenbo A, Karltun E, Clemmensen KE, Lindahl BD.

New Phytol. 2018 Oct 3. doi: 10.1111/nph.15454. [Epub ahead of print]


Responses of generalist and specialist species to fragmented landscapes.

Ramiadantsoa T, Hanski I, Ovaskainen O.

Theor Popul Biol. 2018 Aug 16. pii: S0040-5809(17)30127-2. doi: 10.1016/j.tpb.2018.08.001. [Epub ahead of print]


Protax-fungi: a web-based tool for probabilistic taxonomic placement of fungal internal transcribed spacer sequences.

Abarenkov K, Somervuo P, Nilsson RH, Kirk PM, Huotari T, Abrego N, Ovaskainen O.

New Phytol. 2018 Oct;220(2):517-525. doi: 10.1111/nph.15301. Epub 2018 Jul 23.


Animal Sound Identifier (ASI): software for automated identification of vocal animals.

Ovaskainen O, Moliterno de Camargo U, Somervuo P.

Ecol Lett. 2018 Aug;21(8):1244-1254. doi: 10.1111/ele.13092. Epub 2018 Jun 25.


Direct and indirect effects of a pH gradient bring insights into the mechanisms driving prokaryotic community structures.

Lammel DR, Barth G, Ovaskainen O, Cruz LM, Zanatta JA, Ryo M, de Souza EM, Pedrosa FO.

Microbiome. 2018 Jun 11;6(1):106. doi: 10.1186/s40168-018-0482-8.


Habitat quality is more important than matrix quality for bird communities in protected areas.

Häkkilä M, Abrego N, Ovaskainen O, Mönkkönen M.

Ecol Evol. 2018 Mar 25;8(8):4019-4030. doi: 10.1002/ece3.3923. eCollection 2018 Apr.


Secondary forest regeneration benefits old-growth specialist bats in a fragmented tropical landscape.

Rocha R, Ovaskainen O, López-Baucells A, Farneda FZ, Sampaio EM, Bobrowiec PED, Cabeza M, Palmeirim JM, Meyer CFJ.

Sci Rep. 2018 Feb 28;8(1):3819. doi: 10.1038/s41598-018-21999-2.


Give me a sample of air and I will tell which species are found from your region: Molecular identification of fungi from airborne spore samples.

Abrego N, Norros V, Halme P, Somervuo P, Ali-Kovero H, Ovaskainen O.

Mol Ecol Resour. 2018 May;18(3):511-524. doi: 10.1111/1755-0998.12755. Epub 2018 Feb 2.


PROTAX-Sound: A probabilistic framework for automated animal sound identification.

de Camargo UM, Somervuo P, Ovaskainen O.

PLoS One. 2017 Sep 1;12(9):e0184048. doi: 10.1371/journal.pone.0184048. eCollection 2017.


Connecting Earth observation to high-throughput biodiversity data.

Bush A, Sollmann R, Wilting A, Bohmann K, Cole B, Balzter H, Martius C, Zlinszky A, Calvignac-Spencer S, Cobbold CA, Dawson TP, Emerson BC, Ferrier S, Gilbert MTP, Herold M, Jones L, Leendertz FH, Matthews L, Millington JDA, Olson JR, Ovaskainen O, Raffaelli D, Reeve R, Rödel MO, Rodgers TW, Snape S, Visseren-Hamakers I, Vogler AP, White PCL, Wooster MJ, Yu DW.

Nat Ecol Evol. 2017 Jun 22;1(7):176. doi: 10.1038/s41559-017-0176.


Discovery of long-distance gamete dispersal in a lichen-forming ascomycete.

Ronnås C, Werth S, Ovaskainen O, Várkonyi G, Scheidegger C, Snäll T.

New Phytol. 2017 Oct;216(1):216-226. doi: 10.1111/nph.14714. Epub 2017 Aug 7.


Structure and stability of genetic variance-covariance matrices: A Bayesian sparse factor analysis of transcriptional variation in the three-spined stickleback.

Siren J, Ovaskainen O, Merilä J.

Mol Ecol. 2017 Oct;26(19):5099-5113. doi: 10.1111/mec.14265. Epub 2017 Aug 21.


How are species interactions structured in species-rich communities? A new method for analysing time-series data.

Ovaskainen O, Tikhonov G, Dunson D, Grøtan V, Engen S, Sæther BE, Abrego N.

Proc Biol Sci. 2017 May 31;284(1855). pii: 20170768. doi: 10.1098/rspb.2017.0768.


A numerical approach to determine mutant invasion fitness and evolutionary singular strategies.

Fritsch C, Campillo F, Ovaskainen O.

Theor Popul Biol. 2017 Jun;115:89-99. doi: 10.1016/j.tpb.2017.05.001. Epub 2017 May 10.


Correlated velocity models as a fundamental unit of animal movement: synthesis and applications.

Gurarie E, Fleming CH, Fagan WF, Laidre KL, Hernández-Pliego J, Ovaskainen O.

Mov Ecol. 2017 May 10;5:13. doi: 10.1186/s40462-017-0103-3. eCollection 2017.


Interactions between soil- and dead wood-inhabiting fungal communities during the decay of Norway spruce logs.

Mäkipää R, Rajala T, Schigel D, Rinne KT, Pennanen T, Abrego N, Ovaskainen O.

ISME J. 2017 Sep;11(9):1964-1974. doi: 10.1038/ismej.2017.57. Epub 2017 Apr 21.


How to make more out of community data? A conceptual framework and its implementation as models and software.

Ovaskainen O, Tikhonov G, Norberg A, Guillaume Blanchet F, Duan L, Dunson D, Roslin T, Abrego N.

Ecol Lett. 2017 May;20(5):561-576. doi: 10.1111/ele.12757. Epub 2017 Mar 20.


Atlantic frugivory: a plant-frugivore interaction data set for the Atlantic Forest.

Bello C, Galetti M, Montan D, Pizo MA, Mariguela TC, Culot L, Bufalo F, Labecca F, Pedrosa F, Constantini R, Emer C, Silva WR, da Silva FR, Ovaskainen O, Jordano P.

Ecology. 2017 Jun;98(6):1729. doi: 10.1002/ecy.1818. Epub 2017 May 2.


A Spatio-Temporally Explicit Random Encounter Model for Large-Scale Population Surveys.

Jousimo J, Ovaskainen O.

PLoS One. 2016 Sep 9;11(9):e0162447. doi: 10.1371/journal.pone.0162447. eCollection 2016.


Extending Joint Models in Community Ecology: A Response to Beissinger et al.

Warton DI, Blanchet FG, O'Hara R, Ovaskainen O, Taskinen S, Walker SC, Hui FKC.

Trends Ecol Evol. 2016 Oct;31(10):737-738. doi: 10.1016/j.tree.2016.07.007. Epub 2016 Aug 8. No abstract available.


Unbiased probabilistic taxonomic classification for DNA barcoding.

Somervuo P, Koskela S, Pennanen J, Henrik Nilsson R, Ovaskainen O.

Bioinformatics. 2016 Oct 1;32(19):2920-7. doi: 10.1093/bioinformatics/btw346. Epub 2016 Jun 13.


Novel Insights into the Map Stage of True Navigation in Nonmigratory Wild Birds (Stone Curlews, Burhinus oedicnemus).

Orchan Y, Ovaskainen O, Bouten W, Nathan R.

Am Nat. 2016 Jun;187(6):E152-65. doi: 10.1086/686054. Epub 2016 Apr 19.


Post-fledging movements of white-tailed eagles: Conservation implications for wind-energy development.

Balotari-Chiebao F, Villers A, Ijäs A, Ovaskainen O, Repka S, Laaksonen T.

Ambio. 2016 Nov;45(7):831-840. Epub 2016 Apr 26.


Erratum to: Home-range use patterns and movements of the Siberian flying squirrel in urban forests: effects of habitat composition and connectivity.

Mäkeläinen S, de Knegt HJ, Ovaskainen O, Hanski IK.

Mov Ecol. 2016 Apr 14;4:13. doi: 10.1186/s40462-016-0076-7. eCollection 2016.


Beyond metacommunity paradigms: habitat configuration, life history, and movement shape an herbivore community on oak.

Zheng C, Ovaskainen O, Roslin T, Tack AJ.

Ecology. 2015 Dec;96(12):3175-85.


Home-range use patterns and movements of the Siberian flying squirrel in urban forests: Effects of habitat composition and connectivity.

Mäkeläinen S, de Knegt HJ, Ovaskainen O, Hanski IK.

Mov Ecol. 2016 Feb 17;4:5. doi: 10.1186/s40462-016-0071-z. eCollection 2016. Erratum in: Mov Ecol. 2016;4:13.


Defaunation affects carbon storage in tropical forests.

Bello C, Galetti M, Pizo MA, Magnago LF, Rocha MF, Lima RA, Peres CA, Ovaskainen O, Jordano P.

Sci Adv. 2015 Dec 18;1(11):e1501105. doi: 10.1126/sciadv.1501105. eCollection 2015 Dec.


So Many Variables: Joint Modeling in Community Ecology.

Warton DI, Blanchet FG, O'Hara RB, Ovaskainen O, Taskinen S, Walker SC, Hui FKC.

Trends Ecol Evol. 2015 Dec;30(12):766-779. doi: 10.1016/j.tree.2015.09.007. Epub 2015 Oct 28. Review.


Evolution, plasticity and evolving plasticity of phenology in the tree species Alnus glutinosa.

De Kort H, Vander Mijnsbrugge K, Vandepitte K, Mergeay J, Ovaskainen O, Honnay O.

J Evol Biol. 2016 Feb;29(2):253-64. doi: 10.1111/jeb.12777. Epub 2015 Nov 17.


Spore sensitivity to sunlight and freezing can restrict dispersal in wood-decay fungi.

Norros V, Karhu E, Nordén J, Vähätalo AV, Ovaskainen O.

Ecol Evol. 2015 Aug;5(16):3312-26. doi: 10.1002/ece3.1589. Epub 2015 Jul 22.


Large-Scale Habitat Corridors for Biodiversity Conservation: A Forest Corridor in Madagascar.

Ramiadantsoa T, Ovaskainen O, Rybicki J, Hanski I.

PLoS One. 2015 Jul 22;10(7):e0132126. doi: 10.1371/journal.pone.0132126. eCollection 2015.


The dual role of rivers in facilitating or hindering movements of the false heath fritillary butterfly.

Fabritius H, Rönkä K, Ovaskainen O.

Mov Ecol. 2015 Feb 16;3:4. doi: 10.1186/s40462-015-0031-z. eCollection 2015.


Statistical ecology comes of age.

Gimenez O, Buckland ST, Morgan BJ, Bez N, Bertrand S, Choquet R, Dray S, Etienne MP, Fewster R, Gosselin F, Mérigot B, Monestiez P, Morales JM, Mortier F, Munoz F, Ovaskainen O, Pavoine S, Pradel R, Schurr FM, Thomas L, Thuiller W, Trenkel V, de Valpine P, Rexstad E.

Biol Lett. 2014 Dec;10(12):20140698. doi: 10.1098/rsbl.2014.0698.


Predator-vole interactions in Northern Europe: the role of small mustelids revised.

Korpela K, Helle P, Henttonen H, Korpimäki E, Koskela E, Ovaskainen O, Pietiäinen H, Sundell J, Valkama J, Huitu O.

Proc Biol Sci. 2014 Dec 22;281(1797). pii: 20142119. doi: 10.1098/rspb.2014.2119.


A fungal perspective on conservation biology.

Heilmann-Clausen J, Barron ES, Boddy L, Dahlberg A, Griffith GW, Nordén J, Ovaskainen O, Perini C, Senn-Irlet B, Halme P.

Conserv Biol. 2015 Feb;29(1):61-8. doi: 10.1111/cobi.12388. Epub 2014 Sep 3. Review.


Community turnover of wood-inhabiting fungi across hierarchical spatial scales.

Abrego N, García-Baquero G, Halme P, Ovaskainen O, Salcedo I.

PLoS One. 2014 Jul 24;9(7):e103416. doi: 10.1371/journal.pone.0103416. eCollection 2014.


Do small spores disperse further than large spores?

Norros V, Rannik U, Hussein T, Petäjä T, Vesala T, Ovaskainen O.

Ecology. 2014 Jun;95(6):1612-21.


Disease ecology. Ecological and evolutionary effects of fragmentation on infectious disease dynamics.

Jousimo J, Tack AJ, Ovaskainen O, Mononen T, Susi H, Tollenaere C, Laine AL.

Science. 2014 Jun 13;344(6189):1289-93. doi: 10.1126/science.1253621.


Bryophyte species richness on retention aspens recovers in time but community structure does not.

Oldén A, Ovaskainen O, Kotiaho JS, Laaka-Lindberg S, Halme P.

PLoS One. 2014 Apr 7;9(4):e93786. doi: 10.1371/journal.pone.0093786. eCollection 2014.


Invasion rate of deer ked depends on spatiotemporal variation in host density.

Meier CM, Bonte D, Kaitala A, Ovaskainen O.

Bull Entomol Res. 2014 Jun;104(3):314-22. doi: 10.1017/S0007485314000042. Epub 2014 Feb 13.


Ecological speciation in postglacial European whitefish: rapid adaptive radiations into the littoral, pelagic, and profundal lake habitats.

Præbel K, Knudsen R, Siwertsson A, Karhunen M, Kahilainen KK, Ovaskainen O, Ostbye K, Peruzzi S, Fevolden SE, Amundsen PA.

Ecol Evol. 2013 Dec;3(15):4970-86. doi: 10.1002/ece3.867. Epub 2013 Nov 11.


Bringing habitat information into statistical tests of local adaptation in quantitative traits: a case study of nine-spined sticklebacks.

Karhunen M, Ovaskainen O, Herczeg G, Merilä J.

Evolution. 2014 Feb;68(2):559-68. doi: 10.1111/evo.12268. Epub 2013 Oct 9.


Immigration-extinction dynamics of stochastic populations.

Meerson B, Ovaskainen O.

Phys Rev E Stat Nonlin Soft Matter Phys. 2013 Jul;88(1):012124. Epub 2013 Jul 19.


Community-level phenological response to climate change.

Ovaskainen O, Skorokhodova S, Yakovleva M, Sukhov A, Kutenkov A, Kutenkova N, Shcherbakov A, Meyke E, Delgado Mdel M.

Proc Natl Acad Sci U S A. 2013 Aug 13;110(33):13434-9. doi: 10.1073/pnas.1305533110. Epub 2013 Jul 30.


DRIFTSEL: an R package for detecting signals of natural selection in quantitative traits.

Karhunen M, Merilä J, Leinonen T, Cano JM, Ovaskainen O.

Mol Ecol Resour. 2013 Jul;13(4):746-54. doi: 10.1111/1755-0998.12111. Epub 2013 May 9.


Combining high-throughput sequencing with fruit body surveys reveals contrasting life-history strategies in fungi.

Ovaskainen O, Schigel D, Ali-Kovero H, Auvinen P, Paulin L, Nordén B, Nordén J.

ISME J. 2013 Sep;7(9):1696-709. doi: 10.1038/ismej.2013.61. Epub 2013 Apr 11.


Roots and associated fungi drive long-term carbon sequestration in boreal forest.

Clemmensen KE, Bahr A, Ovaskainen O, Dahlberg A, Ekblad A, Wallander H, Stenlid J, Finlay RD, Wardle DA, Lindahl BD.

Science. 2013 Mar 29;339(6127):1615-8. doi: 10.1126/science.1231923.


Nonlinear effects of climate on boreal rodent dynamics: mild winters do not negate high-amplitude cycles.

Korpela K, Delgado M, Henttonen H, Korpimäki E, Koskela E, Ovaskainen O, Pietiäinen H, Sundell J, Yoccoz NG, Huitu O.

Glob Chang Biol. 2013 Mar;19(3):697-710. doi: 10.1111/gcb.12099. Epub 2013 Jan 7.


Environmentally induced dispersal-related life-history syndrome in the tropical butterfly, Bicyclus anynana.

Saastamoinen M, Brakefield PM, Ovaskainen O.

J Evol Biol. 2012 Nov;25(11):2264-75. doi: 10.1111/j.1420-9101.2012.02602.x. Epub 2012 Sep 17.


Estimating population-level coancestry coefficients by an admixture F model.

Karhunen M, Ovaskainen O.

Genetics. 2012 Oct;192(2):609-17. doi: 10.1534/genetics.112.140871. Epub 2012 Jul 13.

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