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Items: 1 to 50 of 81

1.

Erratum: Whole genome analysis of local Kenyan and global sequences unravels the epidemiological and molecular evolutionary dynamics of RSV genotype ON1 strains.

Otieno JR, Kamau EM, Oketch JW, Ngoi JM, Gichuki AM, Binter Š, Otieno GP, Ngama M, Agoti CN, Cane PA, Kellam P, Cotten M, Lemey P, Nokes DJ.

Virus Evol. 2018 Nov 16;4(2):vey036. doi: 10.1093/ve/vey036. eCollection 2018 Jul.

2.

Whole genome analysis of local Kenyan and global sequences unravels the epidemiological and molecular evolutionary dynamics of RSV genotype ON1 strains.

Otieno JR, Kamau EM, Oketch JW, Ngoi JM, Gichuki AM, Binter Š, Otieno GP, Ngama M, Agoti CN, Cane PA, Kellam P, Cotten M, Lemey P, Nokes DJ.

Virus Evol. 2018 Sep 24;4(2):vey027. doi: 10.1093/ve/vey027. eCollection 2018 Jul. Erratum in: Virus Evol. 2018 Nov 16;4(2):vey036.

3.

Impact of a Rapid Results Initiative Approach on Improving Male Partner Involvement in Prevention of Mother to Child Transmission of HIV in Western Kenya.

Akama E, Mburu M, Mutegi E, Nyanaro G, Otieno JP, Ndolo S, Ochanda B, Ojwang' L, Lewis-Kulzer J, Abuogi L, Oyaro P, Cohen CR, Bukusi EA, Onono M.

AIDS Behav. 2018 Sep;22(9):2956-2965. doi: 10.1007/s10461-018-2140-3.

PMID:
29948337
4.

Poorly cytotoxic terminally differentiated CD56negCD16pos NK cells accumulate in Kenyan children with Burkitt lymphomas.

Forconi CS, Cosgrove CP, Saikumar-Lakshmi P, Nixon CE, Foley J, Ong'echa JM, Otieno JA, Alter G, Münz C, Moormann AM.

Blood Adv. 2018 May 22;2(10):1101-1114. doi: 10.1182/bloodadvances.2017015404.

5.

Human Coronavirus NL63 Molecular Epidemiology and Evolutionary Patterns in Rural Coastal Kenya.

Kiyuka PK, Agoti CN, Munywoki PK, Njeru R, Bett A, Otieno JR, Otieno GP, Kamau E, Clark TG, van der Hoek L, Kellam P, Nokes DJ, Cotten M.

J Infect Dis. 2018 May 5;217(11):1728-1739. doi: 10.1093/infdis/jiy098.

6.

Quantitative market survey of non-woody plants sold at Kariakoo Market in Dar es Salaam, Tanzania.

Posthouwer C, Veldman S, Abihudi S, Otieno JN, van Andel TR, de Boer HJ.

J Ethnopharmacol. 2018 Aug 10;222:280-287. doi: 10.1016/j.jep.2018.04.039. Epub 2018 Apr 30.

PMID:
29723630
7.

Association of maternal KIR gene content polymorphisms with reduction in perinatal transmission of HIV-1.

Omosun YO, Blackstock AJ, Williamson J, van Eijk AM, Ayisi J, Otieno J, Lal RB, Ter Kuile FO, Slutsker L, Shi YP.

PLoS One. 2018 Jan 23;13(1):e0191733. doi: 10.1371/journal.pone.0191733. eCollection 2018.

8.

Lay health worker experiences administering a multi-level combination intervention to improve PMTCT retention.

DiCarlo A, Fayorsey R, Syengo M, Chege D, Sirengo M, Reidy W, Otieno J, Omoto J, Hawken MP, Abrams EJ.

BMC Health Serv Res. 2018 Jan 10;18(1):17. doi: 10.1186/s12913-017-2825-8.

9.

A Mixed-Methods Evaluation of a Community-Based Behavior Change Program to Improve Maternal Health Outcomes in the Upper West Region of Ghana.

Dougherty L, Stammer E, Derbile E, Dery M, Yahaya W, Gle DB, Otieno J, Fotso JC.

J Health Commun. 2018;23(1):80-90. doi: 10.1080/10810730.2017.1414901. Epub 2017 Dec 21.

10.

Integrative microRNA and mRNA deep-sequencing expression profiling in endemic Burkitt lymphoma.

Oduor CI, Kaymaz Y, Chelimo K, Otieno JA, Ong'echa JM, Moormann AM, Bailey JA.

BMC Cancer. 2017 Nov 13;17(1):761. doi: 10.1186/s12885-017-3711-9.

11.

Ethnicity and breast cancer characteristics in Kenya.

Sayed S, Moloo Z, Wasike R, Bird P, Oigara R, Njoroge FW, Shaikh AJ, Prasad SV, Vinayak S, Gierach GL, Dawsey SM, Palakal M, Fan S, Mullooly M, Chauhan R, Okiro P, Gakinya S, Nzioka A, Kyobutungi C, Mohamed S, Haregu T, Mussajee M, Bonass B, Mariwa C, Sherman OA, Mohammed A, Gachii A, Githaiga J, Karanu J, Nyagah R, Njoroge R, Muramba I, Otieno JO, Raburu DO, Mwachiro EB, Abayo I, Saleh M.

Breast Cancer Res Treat. 2018 Jan;167(2):425-437. doi: 10.1007/s10549-017-4511-2. Epub 2017 Sep 26.

12.

A26 Transmission patterns and evolution of RSV in a community outbreak identified by genomic analysis.

Agoti CN, Munywoki PK, Phan MVT, Otieno JR, Kamau E, Bett A, Kombe I, Githinji G, Medley GF, Cane PA, Kellam P, Cotton M, Nokes DJ.

Virus Evol. 2017 Mar 5;3(Suppl 1). pii: vew036.025. doi: 10.1093/ve/vew036.025. eCollection 2017 Mar. No abstract available.

13.

A49 Molecular evolutionary dynamics of respiratory syncytial virus group A in recurrent epidemics in coastal Kenya.

Otieno JR, Agoti CN, Gitahi CW, Bett A, Ngama M, Medley GF, Cane PA, Nokes DJ.

Virus Evol. 2017 Mar 5;3(Suppl 1). pii: vew036.048. doi: 10.1093/ve/vew036.048. eCollection 2017 Mar. No abstract available.

14.

Comprehensive Transcriptome and Mutational Profiling of Endemic Burkitt Lymphoma Reveals EBV Type-Specific Differences.

Kaymaz Y, Oduor CI, Yu H, Otieno JA, Ong'echa JM, Moormann AM, Bailey JA.

Mol Cancer Res. 2017 May;15(5):563-576. doi: 10.1158/1541-7786.MCR-16-0305.

15.

Transmission patterns and evolution of respiratory syncytial virus in a community outbreak identified by genomic analysis.

Agoti CN, Munywoki PK, Phan MVT, Otieno JR, Kamau E, Bett A, Kombe I, Githinji G, Medley GF, Cane PA, Kellam P, Cotten M, Nokes DJ.

Virus Evol. 2017 Mar 11;3(1):vex006. doi: 10.1093/ve/vex006. eCollection 2017 Jan.

16.

Human and Epstein-Barr Virus miRNA Profiling as Predictive Biomarkers for Endemic Burkitt Lymphoma.

Oduor CI, Movassagh M, Kaymaz Y, Chelimo K, Otieno J, Ong'echa JM, Moormann AM, Bailey JA.

Front Microbiol. 2017 Mar 28;8:501. doi: 10.3389/fmicb.2017.00501. eCollection 2017.

17.

Spread and Evolution of Respiratory Syncytial Virus A Genotype ON1, Coastal Kenya, 2010-2015.

Otieno JR, Kamau EM, Agoti CN, Lewa C, Otieno G, Bett A, Ngama M, Cane PA, Nokes DJ.

Emerg Infect Dis. 2017 Feb;23(2):264-271. doi: 10.3201/eid2302.161149.

18.

Regulatory T Cells in Endemic Burkitt Lymphoma Patients Are Associated with Poor Outcomes: A Prospective, Longitudinal Study.

Parsons E, Otieno JA, Ong'echa JM, Nixon CE, Vulule J, Münz C, Stewart VA, Moormann AM.

PLoS One. 2016 Dec 29;11(12):e0167841. doi: 10.1371/journal.pone.0167841. eCollection 2016.

19.

Factors influencing survival among Kenyan children diagnosed with endemic Burkitt lymphoma between 2003 and 2011: A historical cohort study.

Buckle G, Maranda L, Skiles J, Ong'echa JM, Foley J, Epstein M, Vik TA, Schroeder A, Lemberger J, Rosmarin A, Remick SC, Bailey JA, Vulule J, Otieno JA, Moormann AM.

Int J Cancer. 2016 Sep 15;139(6):1231-40. doi: 10.1002/ijc.30170. Epub 2016 May 18.

20.

Molecular Evolutionary Dynamics of Respiratory Syncytial Virus Group A in Recurrent Epidemics in Coastal Kenya.

Otieno JR, Agoti CN, Gitahi CW, Bett A, Ngama M, Medley GF, Cane PA, Nokes DJ.

J Virol. 2016 Apr 29;90(10):4990-5002. doi: 10.1128/JVI.03105-15. Print 2016 May 15.

21.

Untangling the Relationship Between Antiretroviral Therapy Use and Incident Pregnancy: A Marginal Structural Model Analysis Using Data From 47,313 HIV-Positive Women in East Africa.

Elul B, Wools-Kaloustian KK, Wu Y, Musick BS, Nuwagaba-Biribonwoha H, Nash D, Ayaya S, Bukusi E, Okong P, Otieno J, Wabwire D, Kambugu A, Yiannoutsos CT.

J Acquir Immune Defic Syndr. 2016 Jul 1;72(3):324-32. doi: 10.1097/QAI.0000000000000963.

22.

Anaemia in HIV-infected pregnant women receiving triple antiretroviral combination therapy for prevention of mother-to-child transmission: a secondary analysis of the Kisumu breastfeeding study (KiBS).

Odhiambo C, Zeh C, Angira F, Opollo V, Akinyi B, Masaba R, Williamson JM, Otieno J, Mills LA, Lecher SL, Thomas TK.

Trop Med Int Health. 2016 Mar;21(3):373-84. doi: 10.1111/tmi.12662. Epub 2016 Jan 22.

23.

Anemia and Red Blood Cell Abnormalities in HIV-Infected and HIV-Exposed Breastfed Infants: A Secondary Analysis of the Kisumu Breastfeeding Study.

Odhiambo C, Zeh C, Ondoa P, Omolo P, Akoth B, Lwamba H, Lando R, Williamson J, Otieno J, Masaba R, Weidle P, Thomas T; KiBS Study Team.

PLoS One. 2015 Nov 3;10(11):e0141599. doi: 10.1371/journal.pone.0141599. eCollection 2015.

24.

Successive Respiratory Syncytial Virus Epidemics in Local Populations Arise from Multiple Variant Introductions, Providing Insights into Virus Persistence.

Agoti CN, Otieno JR, Ngama M, Mwihuri AG, Medley GF, Cane PA, Nokes DJ.

J Virol. 2015 Nov;89(22):11630-42. doi: 10.1128/JVI.01972-15. Epub 2015 Sep 9.

25.

As Clear as Mud? Determining the Diversity and Prevalence of Prophages in the Draft Genomes of Estuarine Isolates of Clostridium difficile.

Hargreaves KR, Otieno JR, Thanki A, Blades MJ, Millard AD, Browne HP, Lawley TD, Clokie MR.

Genome Biol Evol. 2015 May 27;7(7):1842-55. doi: 10.1093/gbe/evv094.

26.

Vernacular dominance in folk taxonomy: a case study of ethnospecies in medicinal plant trade in Tanzania.

Otieno J, Abihudi S, Veldman S, Nahashon M, van Andel T, de Boer HJ.

J Ethnobiol Ethnomed. 2015 Feb 19;11:10. doi: 10.1186/1746-4269-11-10.

27.

Local evolutionary patterns of human respiratory syncytial virus derived from whole-genome sequencing.

Agoti CN, Otieno JR, Munywoki PK, Mwihuri AG, Cane PA, Nokes DJ, Kellam P, Cotten M.

J Virol. 2015 Apr;89(7):3444-54. doi: 10.1128/JVI.03391-14. Epub 2015 Jan 21.

28.

Surveillance for respiratory health care-associated infections among inpatients in 3 Kenyan hospitals, 2010-2012.

Ndegwa LK, Katz MA, McCormick K, Nganga Z, Mungai A, Emukule G, Kollmann MK, Mayieka L, Otieno J, Breiman RF, Mott JA, Ellingson K.

Am J Infect Control. 2014 Sep;42(9):985-90. doi: 10.1016/j.ajic.2014.05.022.

29.

Rapid spread and diversification of respiratory syncytial virus genotype ON1, Kenya.

Agoti CN, Otieno JR, Gitahi CW, Cane PA, Nokes DJ.

Emerg Infect Dis. 2014 Jun;20(6):950-9. doi: 10.3201/eid2006.131438.

30.

Incidence and predictors of first line antiretroviral regimen modification in western Kenya.

Inzaule S, Otieno J, Kalyango J, Nafisa L, Kabugo C, Nalusiba J, Kwaro D, Zeh C, Karamagi C.

PLoS One. 2014 Apr 2;9(4):e93106. doi: 10.1371/journal.pone.0093106. eCollection 2014.

31.

Examining strain diversity and phylogeography in relation to an unusual epidemic pattern of respiratory syncytial virus (RSV) in a long-term refugee camp in Kenya.

Agoti CN, Mayieka LM, Otieno JR, Ahmed JA, Fields BS, Waiboci LW, Nyoka R, Eidex RB, Marano N, Burton W, Montgomery JM, Breiman RF, Nokes DJ.

BMC Infect Dis. 2014 Apr 1;14:178. doi: 10.1186/1471-2334-14-178.

32.

External built residential environment characteristics that affect mental health of adults.

Ochodo C, Ndetei DM, Moturi WN, Otieno JO.

J Urban Health. 2014 Oct;91(5):908-27. doi: 10.1007/s11524-013-9852-5.

33.

Immunodeficiency at the start of combination antiretroviral therapy in low-, middle-, and high-income countries.

IeDEA and ART Cohort Collaborations, Avila D, Althoff KN, Mugglin C, Wools-Kaloustian K, Koller M, Dabis F, Nash D, Gsponer T, Sungkanuparph S, McGowan C, May M, Cooper D, Chimbetete C, Wolff M, Collier A, McManus H, Davies MA, Costagliola D, Crabtree-Ramirez B, Chaiwarith R, Cescon A, Cornell M, Diero L, Phanuphak P, Sawadogo A, Ehmer J, Eholie SP, Li PC, Fox MP, Gandhi NR, González E, Lee CK, Hoffmann CJ, Kambugu A, Keiser O, Ditangco R, Prozesky H, Lampe F, Kumarasamy N, Kitahata M, Lugina E, Lyamuya R, Vonthanak S, Fink V, d'Arminio Monforte A, Luz PM, Chen YM, Minga A, Casabona J, Mwango A, Choi JY, Newell ML, Bukusi EA, Ngonyani K, Merati TP, Otieno J, Bosco MB, Phiri S, Ng OT, Anastos K, Rockstroh J, Santos I, Oka S, Somi G, Stephan C, Teira R, Wabwire D, Wandeler G, Boulle A, Reiss P, Wood R, Chi BH, Williams C, Sterne JA, Egger M.

J Acquir Immune Defic Syndr. 2014 Jan 1;65(1):e8-16. doi: 10.1097/QAI.0b013e3182a39979.

34.

Factors influencing time to diagnosis and initiation of treatment of endemic Burkitt Lymphoma among children in Uganda and western Kenya: a cross-sectional survey.

Buckle GC, Collins JP, Sumba PO, Nakalema B, Omenah D, Stiffler K, Casper C, Otieno JA, Orem J, Moormann AM.

Infect Agent Cancer. 2013 Sep 30;8(1):36. doi: 10.1186/1750-9378-8-36.

35.

Impact of expanded antiretroviral use on incidence and prevalence of tuberculosis in children with HIV in Kenya.

Abuogi LL, Mwachari C, Leslie HH, Shade SB, Otieno J, Yienya N, Sanguli L, Amukoye E, Cohen CR.

Int J Tuberc Lung Dis. 2013 Oct;17(10):1291-7. doi: 10.5588/ijtld.12.0740.

36.

Sickle cell trait is not associated with endemic Burkitt lymphoma: an ethnicity and malaria endemicity-matched case-control study suggests factors controlling EBV may serve as a predictive biomarker for this pediatric cancer.

Mulama DH, Bailey JA, Foley J, Chelimo K, Ouma C, Jura WG, Otieno J, Vulule J, Moormann AM.

Int J Cancer. 2014 Feb 1;134(3):645-53. doi: 10.1002/ijc.28378. Epub 2013 Aug 16.

37.

Breast cancer diagnosis in a resource poor environment through a collaborative multidisciplinary approach: the Kenyan experience.

Sayed S, Moloo Z, Bird P, Wasike R, Njoroge W, Karanu J, Nzioka A, Sherman O, Prasad S, Mariwa C, Otieno JO, Chumba D, Koech D, Mbinga D, Mohammed M, Njoroge R, Chauhan R, Vinayak S, Kyobutungi C, Saleh M.

J Clin Pathol. 2013 Apr;66(4):307-11. doi: 10.1136/jclinpath-2012-201404. Epub 2013 Feb 1.

PMID:
23378268
38.

Differential association of gene content polymorphisms of killer cell immunoglobulin-like receptors with placental malaria in HIV- and HIV+ mothers.

Omosun YO, Blackstock AJ, Gatei W, Hightower A, van Eijk AM, Ayisi J, Otieno J, Lal RB, Steketee R, Nahlen B, ter Kuile FO, Slutsker L, Shi YP.

PLoS One. 2012;7(6):e38617. doi: 10.1371/journal.pone.0038617. Epub 2012 Jun 8.

39.

Trends in the clinical characteristics of HIV-infected patients initiating antiretroviral therapy in Kenya, Uganda and Tanzania between 2002 and 2009.

Geng EH, Hunt PW, Diero LO, Kimaiyo S, Somi GR, Okong P, Bangsberg DR, Bwana MB, Cohen CR, Otieno JA, Wabwire D, Elul B, Nash D, Easterbrook PJ, Braitstein P, Musick BS, Martin JN, Yiannoutsos CT, Wools-Kaloustian K.

J Int AIDS Soc. 2011 Sep 28;14:46. doi: 10.1186/1758-2652-14-46.

40.

Methanolic extracts of Aloe secundiflora Engl. inhibits in vitro growth of tuberculosis and diarrhea-causing bacteria.

Mariita RM, Orodho JA, Okemo PO, Kirimuhuzya C, Otieno JN, Magadula JJ.

Pharmacognosy Res. 2011 Apr;3(2):95-9. doi: 10.4103/0974-8490.81956.

41.

Triple-antiretroviral prophylaxis to prevent mother-to-child HIV transmission through breastfeeding--the Kisumu Breastfeeding Study, Kenya: a clinical trial.

Thomas TK, Masaba R, Borkowf CB, Ndivo R, Zeh C, Misore A, Otieno J, Jamieson D, Thigpen MC, Bulterys M, Slutsker L, De Cock KM, Amornkul PN, Greenberg AE, Fowler MG; KiBS Study Team.

PLoS Med. 2011 Mar;8(3):e1001015. doi: 10.1371/journal.pmed.1001015. Epub 2011 Mar 29.

42.

Elevated anti-Zta IgG levels and EBV viral load are associated with site of tumor presentation in endemic Burkitt's lymphoma patients: a case control study.

Asito AS, Piriou E, Odada PS, Fiore N, Middeldorp JM, Long C, Dutta S, Lanar DE, Jura WG, Ouma C, Otieno JA, Moormann AM, Rochford R.

Infect Agent Cancer. 2010 Jul 28;5:13. doi: 10.1186/1750-9378-5-13.

43.

CD4+ cell count testing more effective than HIV disease clinical staging in identifying pregnant and postpartum women eligible for antiretroviral therapy in resource-limited settings.

Carter RJ, Dugan K, El-Sadr WM, Myer L, Otieno J, Pungpapong N, Toro PL, Abrams EJ; MTCT Plus Initiative.

J Acquir Immune Defic Syndr. 2010 Nov;55(3):404-10. doi: 10.1097/QAI.0b013e3181e73f4b.

PMID:
20595905
44.

Children with endemic Burkitt lymphoma are deficient in EBNA1-specific IFN-gamma T cell responses.

Moormann AM, Heller KN, Chelimo K, Embury P, Ploutz-Snyder R, Otieno JA, Oduor M, Münz C, Rochford R.

Int J Cancer. 2009 Apr 1;124(7):1721-6. doi: 10.1002/ijc.24014.

45.

Effect of placental malaria and HIV infection on the antibody responses to Plasmodium falciparum in infants.

Ned RM, Price AE, Crawford SB, Ayisi JG, van Eijk AM, Otieno JA, Nahlen BL, Steketee RW, Slutsker L, Shi YP, Lanar DE, Udhayakumar V.

J Infect Dis. 2008 Dec 1;198(11):1609-19. doi: 10.1086/593066.

PMID:
18928377
46.

Elevated gamma interferon-producing NK cells, CD45RO memory-like T cells, and CD4 T cells are associated with protection against malaria infection in pregnancy.

Othoro C, Moore JM, Wannemuehler KA, Moses S, Lal A, Otieno J, Nahlen B, Slutsker L, Shi YP.

Infect Immun. 2008 Apr;76(4):1678-85. doi: 10.1128/IAI.01420-07. Epub 2008 Feb 4.

47.

Multi-plant or single-plant extracts, which is the most effective for local healing in Tanzania?

Otieno JN, Hosea KM, Lyaruu HV, Mahunnah RL.

Afr J Tradit Complement Altern Med. 2008 Jan 22;5(2):165-72.

48.

HIV, malaria, and infant anemia as risk factors for postneonatal infant mortality among HIV-seropositive women in Kisumu, Kenya.

van Eijk AM, Ayisi JG, Ter Kuile FO, Slutsker L, Shi YP, Udhayakumar V, Otieno JA, Kager PA, Lal RB, Steketee RW, Nahlen BL.

J Infect Dis. 2007 Jul 1;196(1):30-7. Epub 2007 May 16.

PMID:
17538880
49.

Subclinical Plasmodium falciparum infection and HIV-1 viral load.

Brouwer KC, Mirel LB, Yang C, Lal RB, Kolczak MS, Van Eijk AM, Ayisi J, Otieno JA, Nahlen BL, Steketee R, Shi YP, Lal AA.

Emerg Infect Dis. 2007 Feb;13(2):351-3. No abstract available.

50.

Seroprevalence of hepatitis B markers in pregnant women in Kenya.

Okoth F, Mbuthia J, Gatheru Z, Murila F, Kanyingi F, Mugo F, Esamai F, Alavi Z, Otieno J, Kiambati H, Wanjuki N.

East Afr Med J. 2006 Sep;83(9):485-93.

PMID:
17447350

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