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Items: 29

1.

Ultrahigh-throughput functional profiling of microbiota communities.

Terekhov SS, Smirnov IV, Malakhova MV, Samoilov AE, Manolov AI, Nazarov AS, Danilov DV, Dubiley SA, Osterman IA, Rubtsova MP, Kostryukova ES, Ziganshin RH, Kornienko MA, Vanyushkina AA, Bukato ON, Ilina EN, Vlasov VV, Severinov KV, Gabibov AG, Altman S.

Proc Natl Acad Sci U S A. 2018 Sep 18;115(38):9551-9556. doi: 10.1073/pnas.1811250115. Epub 2018 Sep 4.

2.

NMR assignments of the WBSCR27 protein related to Williams-Beuren syndrome.

Mariasina SS, Petrova OA, Osterman IA, Sergeeva OV, Efimov SV, Klochkov VV, Sergiev PV, Dontsova OA, Huang TH, Chang CF, Polshakov VI.

Biomol NMR Assign. 2018 Oct;12(2):303-308. doi: 10.1007/s12104-018-9827-2. Epub 2018 Jun 4.

PMID:
29868988
3.

Diversity, Novelty, and Antimicrobial Activity of Endophytic Actinobacteria From Mangrove Plants in Beilun Estuary National Nature Reserve of Guangxi, China.

Jiang ZK, Tuo L, Huang DL, Osterman IA, Tyurin AP, Liu SW, Lukyanov DA, Sergiev PV, Dontsova OA, Korshun VA, Li FN, Sun CH.

Front Microbiol. 2018 May 4;9:868. doi: 10.3389/fmicb.2018.00868. eCollection 2018.

4.

Biosynthesis of Translation Inhibitor Klebsazolicin Proceeds through Heterocyclization and N-Terminal Amidine Formation Catalyzed by a Single YcaO Enzyme.

Travin DY, Metelev M, Serebryakova M, Komarova ES, Osterman IA, Ghilarov D, Severinov K.

J Am Chem Soc. 2018 Apr 25;140(16):5625-5633. doi: 10.1021/jacs.8b02277. Epub 2018 Apr 11.

PMID:
29601195
5.

Binding and Action of Amino Acid Analogs of Chloramphenicol upon the Bacterial Ribosome.

Tereshchenkov AG, Dobosz-Bartoszek M, Osterman IA, Marks J, Sergeeva VA, Kasatsky P, Komarova ES, Stavrianidi AN, Rodin IA, Konevega AL, Sergiev PV, Sumbatyan NV, Mankin AS, Bogdanov AA, Polikanov YS.

J Mol Biol. 2018 Mar 16;430(6):842-852. doi: 10.1016/j.jmb.2018.01.016. Epub 2018 Feb 2.

6.

Klebsazolicin inhibits 70S ribosome by obstructing the peptide exit tunnel.

Metelev M, Osterman IA, Ghilarov D, Khabibullina NF, Yakimov A, Shabalin K, Utkina I, Travin DY, Komarova ES, Serebryakova M, Artamonova T, Khodorkovskii M, Konevega AL, Sergiev PV, Severinov K, Polikanov YS.

Nat Chem Biol. 2017 Oct;13(10):1129-1136. doi: 10.1038/nchembio.2462. Epub 2017 Aug 28.

7.

Madumycin II inhibits peptide bond formation by forcing the peptidyl transferase center into an inactive state.

Osterman IA, Khabibullina NF, Komarova ES, Kasatsky P, Kartsev VG, Bogdanov AA, Dontsova OA, Konevega AL, Sergiev PV, Polikanov YS.

Nucleic Acids Res. 2017 Jul 7;45(12):7507-7514. doi: 10.1093/nar/gkx413.

8.

Mitochondria-targeted antioxidants as highly effective antibiotics.

Nazarov PA, Osterman IA, Tokarchuk AV, Karakozova MV, Korshunova GA, Lyamzaev KG, Skulachev MV, Kotova EA, Skulachev VP, Antonenko YN.

Sci Rep. 2017 May 3;7(1):1394. doi: 10.1038/s41598-017-00802-8.

9.

2-Guanidino-quinazolines as a novel class of translation inhibitors.

Komarova Andreyanova ES, Osterman IA, Pletnev PI, Ivanenkov YA, Majouga AG, Bogdanov AA, Sergiev PV.

Biochimie. 2017 Feb;133:45-55. doi: 10.1016/j.biochi.2016.11.008. Epub 2016 Dec 21.

PMID:
28011211
10.

Application of sorting and next generation sequencing to study 5΄-UTR influence on translation efficiency in Escherichia coli.

Evfratov SA, Osterman IA, Komarova ES, Pogorelskaya AM, Rubtsova MP, Zatsepin TS, Semashko TA, Kostryukova ES, Mironov AA, Burnaev E, Krymova E, Gelfand MS, Govorun VM, Bogdanov AA, Sergiev PV, Dontsova OA.

Nucleic Acids Res. 2017 Apr 7;45(6):3487-3502. doi: 10.1093/nar/gkw1141.

11.

Sorting Out Antibiotics' Mechanisms of Action: a Double Fluorescent Protein Reporter for High-Throughput Screening of Ribosome and DNA Biosynthesis Inhibitors.

Osterman IA, Komarova ES, Shiryaev DI, Korniltsev IA, Khven IM, Lukyanov DA, Tashlitsky VN, Serebryakova MV, Efremenkova OV, Ivanenkov YA, Bogdanov AA, Sergiev PV, Dontsova OA.

Antimicrob Agents Chemother. 2016 Nov 21;60(12):7481-7489. Print 2016 Dec.

12.

Techniques for Screening Translation Inhibitors.

Osterman IA, Bogdanov AA, Dontsova OA, Sergiev PV.

Antibiotics (Basel). 2016 Jun 24;5(3). pii: E22. doi: 10.3390/antibiotics5030022. Review.

13.

Amicoumacin A induces cancer cell death by targeting the eukaryotic ribosome.

Prokhorova IV, Akulich KA, Makeeva DS, Osterman IA, Skvortsov DA, Sergiev PV, Dontsova OA, Yusupova G, Yusupov MM, Dmitriev SE.

Sci Rep. 2016 Jun 14;6:27720. doi: 10.1038/srep27720.

14.

[Application of reporter strains for new antibiotic screening].

Sergiev PV, Osterman IA, Golovina AY, Laptev IG, Pletnev PI, Evfratov SA, Marusich EI, Leonov SV, Ivanenkov YA, Bogdanov AA, Dontsova OA.

Biomed Khim. 2016 Mar-Apr;62(2):117-23. doi: 10.18097/PBMC20166202117. Review. Russian.

PMID:
27143367
15.

[Common features of antibacterial compounds: an analysis of 104 compounds library].

Veselov MS, Sergiev PV, Osterman IA, Skvortsov DA, Golovina AY, Andreyanova ES, Laptev IG, Pletnev PI, Evfratov SA, Marusich EI, Leonov SV, Ivanenkov YA, Bogdanov AA, Dontsova OA.

Biomed Khim. 2015 Nov-Dec;61(6):785-90. doi: 10.18097/PBMC20156106785. Russian.

PMID:
26716754
16.

N6-Methylated Adenosine in RNA: From Bacteria to Humans.

Sergiev PV, Golovina AY, Osterman IA, Nesterchuk MV, Sergeeva OV, Chugunova AA, Evfratov SA, Andreianova ES, Pletnev PI, Laptev IG, Petriukov KS, Navalayeu TI, Koteliansky VE, Bogdanov AA, Dontsova OA.

J Mol Biol. 2016 May 22;428(10 Pt B):2134-45. doi: 10.1016/j.jmb.2015.12.013. Epub 2015 Dec 19. Review.

PMID:
26707202
17.

Regulation of Flagellar Gene Expression in Bacteria.

Osterman IA, Dikhtyar YY, Bogdanov AA, Dontsova OA, Sergiev PV.

Biochemistry (Mosc). 2015 Nov;80(11):1447-56. doi: 10.1134/S000629791511005X. Review.

PMID:
26615435
18.

A bacterial homolog YciH of eukaryotic translation initiation factor eIF1 regulates stress-related gene expression and is unlikely to be involved in translation initiation fidelity.

Osterman IA, Evfratov SA, Dzama MM, Pletnev PI, Kovalchuk SI, Butenko IO, Pobeguts OV, Golovina AY, Govorun VM, Bogdanov AA, Sergiev PV, Dontsova OA.

RNA Biol. 2015;12(9):966-71. doi: 10.1080/15476286.2015.1069464.

19.

Amicoumacin a inhibits translation by stabilizing mRNA interaction with the ribosome.

Polikanov YS, Osterman IA, Szal T, Tashlitsky VN, Serebryakova MV, Kusochek P, Bulkley D, Malanicheva IA, Efimenko TA, Efremenkova OV, Konevega AL, Shaw KJ, Bogdanov AA, Rodnina MV, Dontsova OA, Mankin AS, Steitz TA, Sergiev PV.

Mol Cell. 2014 Nov 20;56(4):531-40. doi: 10.1016/j.molcel.2014.09.020. Epub 2014 Oct 9.

20.

Ribosome-controlled transcription termination is essential for the production of antibiotic microcin C.

Zukher I, Novikova M, Tikhonov A, Nesterchuk MV, Osterman IA, Djordjevic M, Sergiev PV, Sharma CM, Severinov K.

Nucleic Acids Res. 2014 Oct 29;42(19):11891-902. doi: 10.1093/nar/gku880. Epub 2014 Oct 1.

21.

Modified nucleotides m(2)G966/m(5)C967 of Escherichia coli 16S rRNA are required for attenuation of tryptophan operon.

Prokhorova IV, Osterman IA, Burakovsky DE, Serebryakova MV, Galyamina MA, Pobeguts OV, Altukhov I, Kovalchuk S, Alexeev DG, Govorun VM, Bogdanov AA, Sergiev PV, Dontsova OA.

Sci Rep. 2013 Nov 18;3:3236. doi: 10.1038/srep03236.

22.

Investigation of activity of recombinant mengovirus RNA-dependent RNA polymerase and its mutants.

Shatskaya GS, Drutsa VL, Koroleva ON, Osterman IA, Dmitrieva TM.

Biochemistry (Mosc). 2013 Jan;78(1):96-101. doi: 10.1134/S0006297913010124.

PMID:
23379565
23.

A nascent proteome study combining click chemistry with 2DE.

Osterman IA, Ustinov AV, Evdokimov DV, Korshun VA, Sergiev PV, Serebryakova MV, Demina IA, Galyamina MA, Govorun VM, Dontsova OA.

Proteomics. 2013 Jan;13(1):17-21. doi: 10.1002/pmic.201200393. Epub 2012 Dec 15.

PMID:
23161590
24.

Comparison of mRNA features affecting translation initiation and reinitiation.

Osterman IA, Evfratov SA, Sergiev PV, Dontsova OA.

Nucleic Acids Res. 2013 Jan 7;41(1):474-86. doi: 10.1093/nar/gks989. Epub 2012 Oct 23.

25.

The last rRNA methyltransferase of E. coli revealed: the yhiR gene encodes adenine-N6 methyltransferase specific for modification of A2030 of 23S ribosomal RNA.

Golovina AY, Dzama MM, Osterman IA, Sergiev PV, Serebryakova MV, Bogdanov AA, Dontsova OA.

RNA. 2012 Sep;18(9):1725-34. doi: 10.1261/rna.034207.112. Epub 2012 Jul 30.

26.

How much can we learn about the function of bacterial rRNA modification by mining large-scale experimental datasets?

Sergiev PV, Golovina AY, Sergeeva OV, Osterman IA, Nesterchuk MV, Bogdanov AA, Dontsova OA.

Nucleic Acids Res. 2012 Jul;40(12):5694-705. doi: 10.1093/nar/gks219. Epub 2012 Mar 12.

27.

Attenuation-based dual-fluorescent-protein reporter for screening translation inhibitors.

Osterman IA, Prokhorova IV, Sysoev VO, Boykova YV, Efremenkova OV, Svetlov MS, Kolb VA, Bogdanov AA, Sergiev PV, Dontsova OA.

Antimicrob Agents Chemother. 2012 Apr;56(4):1774-83. doi: 10.1128/AAC.05395-11. Epub 2012 Jan 17.

28.

[Systems biology approach to the functional role of enzymatic modification of bacterial ribosome].

Sergiev PV, Osterman IA, Prokhorova IV, Nesterchuk MV, Sergeeva OV, Golovina AIa, Demina IA, Galiamina MA, Serebriakova MV, Dontsova OA.

Bioorg Khim. 2011 Jan-Feb;37(1):81-90. Russian.

PMID:
21460884
29.

Methylated 23S rRNA nucleotide m2G1835 of Escherichia coli ribosome facilitates subunit association.

Osterman IA, Sergiev PV, Tsvetkov PO, Makarov AA, Bogdanov AA, Dontsova OA.

Biochimie. 2011 Apr;93(4):725-9. doi: 10.1016/j.biochi.2010.12.016. Epub 2011 Jan 13.

PMID:
21237242

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