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Items: 18

1.

Introgression of regulatory alleles and a missense coding mutation drive plumage pattern diversity in the rock pigeon.

Vickrey AI, Bruders R, Kronenberg Z, Mackey E, Bohlender RJ, Maclary ET, Maynez R, Osborne EJ, Johnson KP, Huff CD, Yandell M, Shapiro MD.

Elife. 2018 Jul 17;7. pii: e34803. doi: 10.7554/eLife.34803.

2.

Plant organ evolution revealed by phylotranscriptomics in Arabidopsis thaliana.

Lei L, Steffen JG, Osborne EJ, Toomajian C.

Sci Rep. 2017 Aug 8;7(1):7567. doi: 10.1038/s41598-017-07866-6.

3.

Immunosequencing identifies signatures of cytomegalovirus exposure history and HLA-mediated effects on the T cell repertoire.

Emerson RO, DeWitt WS, Vignali M, Gravley J, Hu JK, Osborne EJ, Desmarais C, Klinger M, Carlson CS, Hansen JA, Rieder M, Robins HS.

Nat Genet. 2017 May;49(5):659-665. doi: 10.1038/ng.3822. Epub 2017 Apr 3.

PMID:
28369038
4.

Genomic Rearrangements in Arabidopsis Considered as Quantitative Traits.

Imprialou M, Kahles A, Steffen JG, Osborne EJ, Gan X, Lempe J, Bhomra A, Belfield E, Visscher A, Greenhalgh R, Harberd NP, Goram R, Hein J, Robert-Seilaniantz A, Jones J, Stegle O, Kover P, Tsiantis M, Nordborg M, Rätsch G, Clark RM, Mott R.

Genetics. 2017 Apr;205(4):1425-1441. doi: 10.1534/genetics.116.192823. Epub 2017 Feb 7.

5.

Limited Contribution of DNA Methylation Variation to Expression Regulation in Arabidopsis thaliana.

Meng D, Dubin M, Zhang P, Osborne EJ, Stegle O, Clark RM, Nordborg M.

PLoS Genet. 2016 Jul 11;12(7):e1006141. doi: 10.1371/journal.pgen.1006141. eCollection 2016 Jul.

6.

Wham: Identifying Structural Variants of Biological Consequence.

Kronenberg ZN, Osborne EJ, Cone KR, Kennedy BJ, Domyan ET, Shapiro MD, Elde NC, Yandell M.

PLoS Comput Biol. 2015 Dec 1;11(12):e1004572. doi: 10.1371/journal.pcbi.1004572. eCollection 2015 Dec.

7.

DNA methylation in Arabidopsis has a genetic basis and shows evidence of local adaptation.

Dubin MJ, Zhang P, Meng D, Remigereau MS, Osborne EJ, Paolo Casale F, Drewe P, Kahles A, Jean G, Vilhjálmsson B, Jagoda J, Irez S, Voronin V, Song Q, Long Q, Rätsch G, Stegle O, Clark RM, Nordborg M.

Elife. 2015 May 5;4:e05255. doi: 10.7554/eLife.05255.

8.

High resolution genetic mapping uncovers chitin synthase-1 as the target-site of the structurally diverse mite growth inhibitors clofentezine, hexythiazox and etoxazole in Tetranychus urticae.

Demaeght P, Osborne EJ, Odman-Naresh J, Grbić M, Nauen R, Merzendorfer H, Clark RM, Van Leeuwen T.

Insect Biochem Mol Biol. 2014 Aug;51:52-61. doi: 10.1016/j.ibmb.2014.05.004. Epub 2014 May 22.

9.

Reciprocal responses in the interaction between Arabidopsis and the cell-content-feeding chelicerate herbivore spider mite.

Zhurov V, Navarro M, Bruinsma KA, Arbona V, Santamaria ME, Cazaux M, Wybouw N, Osborne EJ, Ens C, Rioja C, Vermeirssen V, Rubio-Somoza I, Krishna P, Diaz I, Schmid M, Gómez-Cadenas A, Van de Peer Y, Grbic M, Clark RM, Van Leeuwen T, Grbic V.

Plant Physiol. 2014 Jan;164(1):384-99. doi: 10.1104/pp.113.231555. Epub 2013 Nov 27.

10.

A burst of ABC genes in the genome of the polyphagous spider mite Tetranychus urticae.

Dermauw W, Osborne EJ, Clark RM, Grbić M, Tirry L, Van Leeuwen T.

BMC Genomics. 2013 May 10;14:317. doi: 10.1186/1471-2164-14-317.

11.

Population bulk segregant mapping uncovers resistance mutations and the mode of action of a chitin synthesis inhibitor in arthropods.

Van Leeuwen T, Demaeght P, Osborne EJ, Dermauw W, Gohlke S, Nauen R, Grbic M, Tirry L, Merzendorfer H, Clark RM.

Proc Natl Acad Sci U S A. 2012 Mar 20;109(12):4407-12. doi: 10.1073/pnas.1200068109. Epub 2012 Mar 5.

12.

Divergence, convergence, and the ancestry of feral populations in the domestic rock pigeon.

Stringham SA, Mulroy EE, Xing J, Record D, Guernsey MW, Aldenhoven JT, Osborne EJ, Shapiro MD.

Curr Biol. 2012 Feb 21;22(4):302-8. doi: 10.1016/j.cub.2011.12.045. Epub 2012 Jan 19.

13.

The genome of Tetranychus urticae reveals herbivorous pest adaptations.

Grbić M, Van Leeuwen T, Clark RM, Rombauts S, Rouzé P, Grbić V, Osborne EJ, Dermauw W, Ngoc PC, Ortego F, Hernández-Crespo P, Diaz I, Martinez M, Navajas M, Sucena É, Magalhães S, Nagy L, Pace RM, Djuranović S, Smagghe G, Iga M, Christiaens O, Veenstra JA, Ewer J, Villalobos RM, Hutter JL, Hudson SD, Velez M, Yi SV, Zeng J, Pires-daSilva A, Roch F, Cazaux M, Navarro M, Zhurov V, Acevedo G, Bjelica A, Fawcett JA, Bonnet E, Martens C, Baele G, Wissler L, Sanchez-Rodriguez A, Tirry L, Blais C, Demeestere K, Henz SR, Gregory TR, Mathieu J, Verdon L, Farinelli L, Schmutz J, Lindquist E, Feyereisen R, Van de Peer Y.

Nature. 2011 Nov 23;479(7374):487-92. doi: 10.1038/nature10640.

14.

Multiple reference genomes and transcriptomes for Arabidopsis thaliana.

Gan X, Stegle O, Behr J, Steffen JG, Drewe P, Hildebrand KL, Lyngsoe R, Schultheiss SJ, Osborne EJ, Sreedharan VT, Kahles A, Bohnert R, Jean G, Derwent P, Kersey P, Belfield EJ, Harberd NP, Kemen E, Toomajian C, Kover PX, Clark RM, Rätsch G, Mott R.

Nature. 2011 Aug 28;477(7365):419-23. doi: 10.1038/nature10414.

15.
16.

Heat shock response of killifish (Fundulus heteroclitus): candidate gene and heterologous microarray approaches.

Healy TM, Tymchuk WE, Osborne EJ, Schulte PM.

Physiol Genomics. 2010 Apr 1;41(2):171-84. doi: 10.1152/physiolgenomics.00209.2009. Epub 2010 Jan 26.

PMID:
20103695
17.

Hypersensitivity of human testis-tumour cell lines to chemotherapeutic drugs.

Masters JR, Osborne EJ, Walker MC, Parris CN.

Int J Cancer. 1993 Jan 21;53(2):340-6.

PMID:
8425772
18.

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