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Items: 30

1.

Identification and validation of a tumor-infiltrating Treg transcriptional signature conserved across species and tumor types.

Magnuson AM, Kiner E, Ergun A, Park JS, Asinovski N, Ortiz-Lopez A, Kilcoyne A, Paoluzzi-Tomada E, Weissleder R, Mathis D, Benoist C.

Proc Natl Acad Sci U S A. 2018 Nov 6;115(45):E10672-E10681. doi: 10.1073/pnas.1810580115. Epub 2018 Oct 22.

PMID:
30348759
2.

Catalysis and inhibition of tyrosinase in the presence of cinnamic acid and some of its derivatives.

Garcia-Jimenez A, García-Molina F, Teruel-Puche JA, Saura-Sanmartin A, Garcia-Ruiz PA, Ortiz-Lopez A, Rodríguez-López JN, Garcia-Canovas F, Munoz-Munoz J.

Int J Biol Macromol. 2018 Nov;119:548-554. doi: 10.1016/j.ijbiomac.2018.07.173. Epub 2018 Jul 29.

PMID:
30063931
3.

Pairing off: a bottom-up approach to the human gut microbiome.

Abreu C, Ortiz Lopez A, Gore J.

Mol Syst Biol. 2018 Jun 21;14(6):e8425. doi: 10.15252/msb.20188425. No abstract available.

4.

Mining the Human Gut Microbiota for Immunomodulatory Organisms.

Geva-Zatorsky N, Sefik E, Kua L, Pasman L, Tan TG, Ortiz-Lopez A, Yanortsang TB, Yang L, Jupp R, Mathis D, Benoist C, Kasper DL.

Cell. 2017 Feb 23;168(5):928-943.e11. doi: 10.1016/j.cell.2017.01.022. Epub 2017 Feb 16.

5.

Identifying species of symbiont bacteria from the human gut that, alone, can induce intestinal Th17 cells in mice.

Tan TG, Sefik E, Geva-Zatorsky N, Kua L, Naskar D, Teng F, Pasman L, Ortiz-Lopez A, Jupp R, Wu HJ, Kasper DL, Benoist C, Mathis D.

Proc Natl Acad Sci U S A. 2016 Dec 13;113(50):E8141-E8150. Epub 2016 Nov 23.

6.

Network pharmacology of JAK inhibitors.

Moodley D, Yoshida H, Mostafavi S, Asinovski N, Ortiz-Lopez A, Symanowicz P, Telliez JB, Hegen M, Clark JD, Mathis D, Benoist C.

Proc Natl Acad Sci U S A. 2016 Aug 30;113(35):9852-7. doi: 10.1073/pnas.1610253113. Epub 2016 Aug 11.

7.

MUCOSAL IMMUNOLOGY. Individual intestinal symbionts induce a distinct population of RORγ⁺ regulatory T cells.

Sefik E, Geva-Zatorsky N, Oh S, Konnikova L, Zemmour D, McGuire AM, Burzyn D, Ortiz-Lopez A, Lobera M, Yang J, Ghosh S, Earl A, Snapper SB, Jupp R, Kasper D, Mathis D, Benoist C.

Science. 2015 Aug 28;349(6251):993-7. doi: 10.1126/science.aaa9420. Epub 2015 Aug 13.

8.

Gene expression during the generation and activation of mouse neutrophils: implication of novel functional and regulatory pathways.

Ericson JA, Duffau P, Yasuda K, Ortiz-Lopez A, Rothamel K, Rifkin IR, Monach PA; ImmGen Consortium.

PLoS One. 2014 Oct 3;9(10):e108553. doi: 10.1371/journal.pone.0108553. eCollection 2014.

9.

Variation and genetic control of gene expression in primary immunocytes across inbred mouse strains.

Mostafavi S, Ortiz-Lopez A, Bogue MA, Hattori K, Pop C, Koller D, Mathis D, Benoist C; Immunological Genome Consortium.

J Immunol. 2014 Nov 1;193(9):4485-96. doi: 10.4049/jimmunol.1401280. Epub 2014 Sep 29.

10.

Type 1 diabetes in NOD mice unaffected by mast cell deficiency.

Gutierrez DA, Fu W, Schonefeldt S, Feyerabend TB, Ortiz-Lopez A, Lampi Y, Liston A, Mathis D, Rodewald HR.

Diabetes. 2014 Nov;63(11):3827-34. doi: 10.2337/db14-0372. Epub 2014 Jun 10.

11.

Protective effects of C-type natriuretic peptide on linear growth and articular cartilage integrity in a mouse model of inflammatory arthritis.

Bükülmez H, Khan F, Bartels CF, Murakami S, Ortiz-Lopez A, Sattar A, Haqqi TM, Warman ML.

Arthritis Rheumatol. 2014 Jan;66(1):78-89. doi: 10.1002/art.38199.

12.

The transcriptional landscape of αβ T cell differentiation.

Mingueneau M, Kreslavsky T, Gray D, Heng T, Cruse R, Ericson J, Bendall S, Spitzer MH, Nolan GP, Kobayashi K, von Boehmer H, Mathis D, Benoist C; Immunological Genome Consortium, Best AJ, Knell J, Goldrath A, Joic V, Koller D, Shay T, Regev A, Cohen N, Brennan P, Brenner M, Kim F, Nageswara Rao T, Wagers A, Heng T, Ericson J, Rothamel K, Ortiz-Lopez A, Mathis D, Benoist C, Bezman NA, Sun JC, Min-Oo G, Kim CC, Lanier LL, Miller J, Brown B, Merad M, Gautier EL, Jakubzick C, Randolph GJ, Monach P, Blair DA, Dustin ML, Shinton SA, Hardy RR, Laidlaw D, Collins J, Gazit R, Rossi DJ, Malhotra N, Sylvia K, Kang J, Kreslavsky T, Fletcher A, Elpek K, Bellemare-Pelletier A, Malhotra D, Turley S.

Nat Immunol. 2013 Jun;14(6):619-32. doi: 10.1038/ni.2590. Epub 2013 May 5.

13.

Identification of transcriptional regulators in the mouse immune system.

Jojic V, Shay T, Sylvia K, Zuk O, Sun X, Kang J, Regev A, Koller D; Immunological Genome Project Consortium, Best AJ, Knell J, Goldrath A, Joic V, Koller D, Shay T, Regev A, Cohen N, Brennan P, Brenner M, Kim F, Rao TN, Wagers A, Heng T, Ericson J, Rothamel K, Ortiz-Lopez A, Mathis D, Benoist C, Bezman NA, Sun JC, Min-Oo G, Kim CC, Lanier LL, Miller J, Brown B, Merad M, Gautier EL, Jakubzick C, Randolph GJ, Monach P, Blair DA, Dustin ML, Shinton SA, Hardy RR, Laidlaw D, Collins J, Gazit R, Rossi DJ, Malhotra N, Sylvia K, Kang J, Kreslavsky T, Fletcher A, Elpek K, Bellemarte-Pelletier A, Malhotra D, Turley S.

Nat Immunol. 2013 Jun;14(6):633-43. doi: 10.1038/ni.2587. Epub 2013 Apr 28.

14.

Genome-wide and species-wide dissection of the genetics of arthritis severity in heterogeneous stock mice.

Johnsen AK, Valdar W, Golden L, Ortiz-Lopez A, Hitzemann R, Flint J, Mathis D, Benoist C.

Arthritis Rheum. 2011 Sep;63(9):2630-40. doi: 10.1002/art.30425.

15.

Deficiency of CXCR2, but not other chemokine receptors, attenuates autoantibody-mediated arthritis in a murine model.

Jacobs JP, Ortiz-Lopez A, Campbell JJ, Gerard CJ, Mathis D, Benoist C.

Arthritis Rheum. 2010 Jul;62(7):1921-32. doi: 10.1002/art.27470.

16.

The same systemic autoimmune disease provokes arthritis and endocarditis via distinct mechanisms.

Binstadt BA, Hebert JL, Ortiz-Lopez A, Bronson R, Benoist C, Mathis D.

Proc Natl Acad Sci U S A. 2009 Sep 29;106(39):16758-63. doi: 10.1073/pnas.0909132106. Epub 2009 Sep 15.

17.

Abrogation of antibody-induced arthritis in mice by a self-activating viridin prodrug and association with impaired neutrophil and endothelial cell function.

Stangenberg L, Ellson C, Cortez-Retamozo V, Ortiz-Lopez A, Yuan H, Blois J, Smith RA, Yaffe MB, Weissleder R, Benoist C, Mathis D, Josephson L, Mahmood U.

Arthritis Rheum. 2009 Aug;60(8):2314-24. doi: 10.1002/art.24704.

18.

The K/BxN mouse model of inflammatory arthritis: theory and practice.

Monach P, Hattori K, Huang H, Hyatt E, Morse J, Nguyen L, Ortiz-Lopez A, Wu HJ, Mathis D, Benoist C.

Methods Mol Med. 2007;136:269-82.

PMID:
17983155
19.
20.

Variation in IL-1beta gene expression is a major determinant of genetic differences in arthritis aggressivity in mice.

Ohmura K, Johnsen A, Ortiz-Lopez A, Desany P, Roy M, Besse W, Rogus J, Bogue M, Puech A, Lathrop M, Mathis D, Benoist C.

Proc Natl Acad Sci U S A. 2005 Aug 30;102(35):12489-94. Epub 2005 Aug 19.

21.

Critical roles for interleukin 1 and tumor necrosis factor alpha in antibody-induced arthritis.

Ji H, Pettit A, Ohmura K, Ortiz-Lopez A, Duchatelle V, Degott C, Gravallese E, Mathis D, Benoist C.

J Exp Med. 2002 Jul 1;196(1):77-85.

22.

Auxin stimulates S6 ribosomal protein phosphorylation in maize thereby affecting protein synthesis regulation.

Beltrán-Peña E, Aguilar R, Ortíz-López A, Dinkova TD, De Jiménez ES.

Physiol Plant. 2002 Jun;115(2):291-297.

PMID:
12060248
23.

Over-expression of cytosolic glutamine synthetase increases photosynthesis and growth at low nitrogen concentrations.

Fuentes SI, Allen DJ, Ortiz-Lopez A, Hernández G.

J Exp Bot. 2001 May;52(358):1071-81.

PMID:
11432923
24.

ANT1, an aromatic and neutral amino acid transporter in Arabidopsis.

Chen L, Ortiz-Lopez A, Jung A, Bush DR.

Plant Physiol. 2001 Apr;125(4):1813-20.

25.

Amino acid transporters in plants.

Ortiz-Lopez A, Chang H, Bush DR.

Biochim Biophys Acta. 2000 May 1;1465(1-2):275-80. Review.

26.

Ribonucleoprotein particles of quiescent maize embryonic axes.

Rincón-Guzmán A, Beltrán-Peña E, Ortíz-López A, Sánchez de Jiménez E.

Plant Mol Biol. 1998 Oct;38(3):357-64.

PMID:
9747844
27.

Synthesis of ribosomal proteins from stored mRNAs early in seed germination.

Beltrán-Peña E, Ortíz-López A, Sánchez de Jiménez E.

Plant Mol Biol. 1995 May;28(2):327-36.

PMID:
7599317
29.

Photophosphorylation in Attached Leaves of Helianthus annuus at Low Water Potentials.

Ortiz-Lopez A, Ort DR, Boyer JS.

Plant Physiol. 1991 Aug;96(4):1018-25.

30.

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