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Items: 29

1.

Culture-independent tracking of Vibrio cholerae lineages reveals complex spatiotemporal dynamics in a natural population.

Kirchberger PC, Orata FD, Nasreen T, Kauffman KM, Tarr CL, Case RJ, Polz MF, Boucher YF.

Environ Microbiol. 2020 Jan 22. doi: 10.1111/1462-2920.14921. [Epub ahead of print]

PMID:
31970854
2.

Insights on adsorption of carbamazepine onto iron oxide modified diatomaceous earth: Kinetics, isotherms, thermodynamics, and mechanisms.

Jemutai-Kimosop S, Orata F, Shikuku VO, Okello VA, Getenga ZM.

Environ Res. 2020 Jan;180:108898. doi: 10.1016/j.envres.2019.108898. Epub 2019 Nov 7.

PMID:
31732171
3.

Assessment of heavy metals in benthic macroinvertebrates, water and sediments in River Isiukhu, Kenya.

Oremo J, Orata F, Owino J, Shivoga W.

Environ Monit Assess. 2019 Oct 16;191(11):646. doi: 10.1007/s10661-019-7858-5.

PMID:
31620892
4.

Phylogenomic Analysis of the Gammaproteobacterial Methanotrophs (Order Methylococcales) Calls for the Reclassification of Members at the Genus and Species Levels.

Orata FD, Meier-Kolthoff JP, Sauvageau D, Stein LY.

Front Microbiol. 2018 Dec 19;9:3162. doi: 10.3389/fmicb.2018.03162. eCollection 2018.

5.
6.

Bacillus amyloliquefaciens ssp. plantarum F11 isolated from Algerian salty lake as a source of biosurfactants and bioactive lipopeptides.

Daas MS, Acedo JZ, Rosana ARR, Orata FD, Reiz B, Zheng J, Nateche F, Case RJ, Kebbouche-Gana S, Vederas JC.

FEMS Microbiol Lett. 2018 Jan 1;365(1). doi: 10.1093/femsle/fnx248.

PMID:
29186395
7.

Complete Genome Sequence of Vibrio sp. Strain 2521-89, a Close Relative of Vibrio cholerae Isolated from Lake Water in New Mexico, USA.

Liang K, Orata FD, Winkjer NS, Rowe LA, Tarr CL, Boucher Y.

Genome Announc. 2017 Aug 31;5(35). pii: e00905-17. doi: 10.1128/genomeA.00905-17.

8.

A genomic island in Vibrio cholerae with VPI-1 site-specific recombination characteristics contains CRISPR-Cas and type VI secretion modules.

Labbate M, Orata FD, Petty NK, Jayatilleke ND, King WL, Kirchberger PC, Allen C, Mann G, Mutreja A, Thomson NR, Boucher Y, Charles IG.

Sci Rep. 2016 Nov 15;6:36891. doi: 10.1038/srep36891.

9.

Residue levels and discharge loads of antibiotics in wastewater treatment plants (WWTPs), hospital lagoons, and rivers within Lake Victoria Basin, Kenya.

Kimosop SJ, Getenga ZM, Orata F, Okello VA, Cheruiyot JK.

Environ Monit Assess. 2016 Sep;188(9):532. doi: 10.1007/s10661-016-5534-6. Epub 2016 Aug 23.

PMID:
27553946
10.

Characterization of clinical and environmental isolates of Vibrio cidicii sp. nov., a close relative of Vibrio navarrensis.

Orata FD, Xu Y, Gladney LM, Rishishwar L, Case RJ, Boucher Y, Jordan IK, Tarr CL.

Int J Syst Evol Microbiol. 2016 Oct;66(10):4148-4155. doi: 10.1099/ijsem.0.001327. Epub 2016 Jul 27.

PMID:
27468862
11.

Draft Genome Sequences of Four Bacterial Strains Isolated from a Polymicrobial Culture of Naked (N-Type) Emiliania huxleyi CCMP1516.

Orata FD, Rosana AR, Xu Y, Simkus DN, Bramucci AR, Boucher Y, Case RJ.

Genome Announc. 2016 Jul 14;4(4). pii: e00674-16. doi: 10.1128/genomeA.00674-16.

12.

Draft Genome Sequences of Seven Bacterial Strains Isolated from a Polymicrobial Culture of Coccolith-Bearing (C-Type) Emiliania huxleyi M217.

Rosana AR, Orata FD, Xu Y, Simkus DN, Bramucci AR, Boucher Y, Case RJ.

Genome Announc. 2016 Jul 14;4(4). pii: e00673-16. doi: 10.1128/genomeA.00673-16.

13.

A Small Number of Phylogenetically Distinct Clonal Complexes Dominate a Coastal Vibrio cholerae Population.

Kirchberger PC, Orata FD, Barlow EJ, Kauffman KM, Case RJ, Polz MF, Boucher Y.

Appl Environ Microbiol. 2016 Aug 30;82(18):5576-86. doi: 10.1128/AEM.01177-16. Print 2016 Sep 15.

14.

Comparative studies in electrochemical degradation of sulfamethoxazole and diclofenac in water by using various electrodes and phosphate and sulfate supporting electrolytes.

Sifuna FW, Orata F, Okello V, Jemutai-Kimosop S.

J Environ Sci Health A Tox Hazard Subst Environ Eng. 2016 Sep 18;51(11):954-61. doi: 10.1080/10934529.2016.1191814. Epub 2016 Jun 23.

PMID:
27337050
15.

The out-of-the-delta hypothesis: dense human populations in low-lying river deltas served as agents for the evolution of a deadly pathogen.

Boucher Y, Orata FD, Alam M.

Front Microbiol. 2015 Oct 19;6:1120. doi: 10.3389/fmicb.2015.01120. eCollection 2015.

16.

The Dynamics of Genetic Interactions between Vibrio metoecus and Vibrio cholerae, Two Close Relatives Co-Occurring in the Environment.

Orata FD, Kirchberger PC, Méheust R, Barlow EJ, Tarr CL, Boucher Y.

Genome Biol Evol. 2015 Oct 9;7(10):2941-54. doi: 10.1093/gbe/evv193.

17.

Perfluoroalkyl acids in selected wastewater treatment plants and their discharge load within the Lake Victoria basin in Kenya.

Chirikona F, Filipovic M, Ooko S, Orata F.

Environ Monit Assess. 2015 May;187(5):238. doi: 10.1007/s10661-015-4425-6. Epub 2015 Apr 11.

PMID:
25861900
18.

Biodegradation of carbofuran in soils within Nzoia River Basin, Kenya.

Onunga DO, Kowino IO, Ngigi AN, Osogo A, Orata F, Getenga ZM, Were H.

J Environ Sci Health B. 2015;50(6):387-97. doi: 10.1080/03601234.2015.1011965.

PMID:
25844859
19.

The 2010 cholera outbreak in Haiti: how science solved a controversy.

Orata FD, Keim PS, Boucher Y.

PLoS Pathog. 2014 Apr 3;10(4):e1003967. doi: 10.1371/journal.ppat.1003967. eCollection 2014 Apr. Review. No abstract available.

20.

The dissipation of carbofuran in two soils with different pesticide application histories within Nzoia River Drainage Basin, Kenya.

Jemutai-Kimosop S, Orata FO, K'Owino IO, Getenga ZM.

Bull Environ Contam Toxicol. 2014 May;92(5):616-20. doi: 10.1007/s00128-014-1234-5. Epub 2014 Feb 28.

PMID:
24577789
21.

Evolutionary dynamics of Vibrio cholerae O1 following a single-source introduction to Haiti.

Katz LS, Petkau A, Beaulaurier J, Tyler S, Antonova ES, Turnsek MA, Guo Y, Wang S, Paxinos EE, Orata F, Gladney LM, Stroika S, Folster JP, Rowe L, Freeman MM, Knox N, Frace M, Boncy J, Graham M, Hammer BK, Boucher Y, Bashir A, Hanage WP, Van Domselaar G, Tarr CL.

mBio. 2013 Jul 2;4(4). pii: e00398-13. doi: 10.1128/mBio.00398-13.

22.

Per- and polyfluoroalkyl substances in selected sewage sludge in Nigeria.

Sindiku O, Orata F, Weber R, Osibanjo O.

Chemosphere. 2013 Jul;92(3):329-35. doi: 10.1016/j.chemosphere.2013.04.010. Epub 2013 May 3.

PMID:
23648329
23.

Bioaccumulation of perfluoroalkyl acids in dairy cows in a naturally contaminated environment.

Vestergren R, Orata F, Berger U, Cousins IT.

Environ Sci Pollut Res Int. 2013 Nov;20(11):7959-69. doi: 10.1007/s11356-013-1722-x. Epub 2013 May 4.

PMID:
23644948
24.

The influence of filter mud compost and Tithonia diversifolia leaves on the dissipation of diuron in soils within the Nzoia River Drainage Basin, Kenya.

Jemutai-Kimosop S, Orata F, Getenga Z.

Bull Environ Contam Toxicol. 2012 Aug;89(2):328-33. doi: 10.1007/s00128-012-0685-9. Epub 2012 May 22.

PMID:
22617949
25.

Degradation studies of new substitutes for perfluorinated surfactants.

Quinete N, Orata F, Maes A, Gehron M, Bauer KH, Moreira I, Wilken RD.

Arch Environ Contam Toxicol. 2010 Jul;59(1):20-30. doi: 10.1007/s00244-009-9451-3. Epub 2010 Jan 7.

PMID:
20054527
26.

Long chain perfluorinated alkyl acids derivatisation and identification in biota and abiota matrices using gas chromatography.

Orata F, Quinete N, Wilken RD.

Bull Environ Contam Toxicol. 2009 Nov;83(5):630-5. doi: 10.1007/s00128-009-9756-y. Epub 2009 May 12.

PMID:
19434349
27.

Determination of perfluorooctanoic acid and perfluorooctane sulfonate in Lake Victoria Gulf water.

Orata F, Quinete N, Werres F, Wilken RD.

Bull Environ Contam Toxicol. 2009 Feb;82(2):218-22. doi: 10.1007/s00128-008-9543-1. Epub 2008 Sep 13.

PMID:
18791652
28.

A study on how military dependents at Philippine Navy Officers Wives Association (PNOWA) Child Learning Center brush their teeth. 2.

Toñacao LG, Orata FM, Cariño BH, Bautista LF.

J Philipp Dent Assoc. 1999 Mar-May;50(4):27-48. No abstract available.

PMID:
10808355
29.

A study on how military dependents at Philippine Navy Officers Wives Association (PNOWA) Child Learning Center brush their teeth.

Toñacao LG, Orata FM, Cariño BH, Bautista LF.

J Philipp Dent Assoc. 1998 Sep-Nov;50(2):43-62. No abstract available.

PMID:
10597149

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