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Items: 1 to 50 of 195

1.

Role of rare earth elements in methanol oxidation.

Picone N, Op den Camp HJ.

Curr Opin Chem Biol. 2018 Oct 8;49:39-44. doi: 10.1016/j.cbpa.2018.09.019. [Epub ahead of print] Review.

2.

Response of the Anaerobic Methanotroph "Candidatus Methanoperedens nitroreducens" to Oxygen Stress.

Guerrero-Cruz S, Cremers G, van Alen TA, Op den Camp HJM, Jetten MSM, Rasigraf O, Vaksmaa A.

Appl Environ Microbiol. 2018 Nov 30;84(24). pii: e01832-18. doi: 10.1128/AEM.01832-18. Print 2018 Dec 15.

PMID:
30291120
3.

Comparative Genomics of Candidatus Methylomirabilis Species and Description of Ca. Methylomirabilis Lanthanidiphila.

Versantvoort W, Guerrero-Cruz S, Speth DR, Frank J, Gambelli L, Cremers G, van Alen T, Jetten MSM, Kartal B, Op den Camp HJM, Reimann J.

Front Microbiol. 2018 Jul 24;9:1672. doi: 10.3389/fmicb.2018.01672. eCollection 2018.

4.

Impact of the lanthanide contraction on the activity of a lanthanide-dependent methanol dehydrogenase - a kinetic and DFT study.

Lumpe H, Pol A, Op den Camp HJM, Daumann LJ.

Dalton Trans. 2018 Aug 7;47(31):10463-10472. doi: 10.1039/c8dt01238e.

5.

Different Recovery Processes of Soil Ammonia Oxidizers from Flooding Disturbance.

Ye F, Ma MH, Op den Camp HJM, Chatzinotas A, Li L, Lv MQ, Wu SJ, Wang Y.

Microb Ecol. 2018 Nov;76(4):1041-1052. doi: 10.1007/s00248-018-1183-3. Epub 2018 Apr 11.

PMID:
29644407
6.

Resolving the complete genome of Kuenenia stuttgartiensis from a membrane bioreactor enrichment using Single-Molecule Real-Time sequencing.

Frank J, Lücker S, Vossen RHAM, Jetten MSM, Hall RJ, Op den Camp HJM, Anvar SY.

Sci Rep. 2018 Mar 15;8(1):4580. doi: 10.1038/s41598-018-23053-7.

7.

Similar but Not the Same: First Kinetic and Structural Analyses of a Methanol Dehydrogenase Containing a Europium Ion in the Active Site.

Jahn B, Pol A, Lumpe H, Barends TRM, Dietl A, Hogendoorn C, Op den Camp HJM, Daumann LJ.

Chembiochem. 2018 Mar 11. doi: 10.1002/cbic.201800130. [Epub ahead of print]

8.

Current perspectives on the application of N-damo and anammox in wastewater treatment.

van Kessel MA, Stultiens K, Slegers MF, Guerrero Cruz S, Jetten MS, Kartal B, Op den Camp HJ.

Curr Opin Biotechnol. 2018 Apr;50:222-227. doi: 10.1016/j.copbio.2018.01.031. Epub 2018 Feb 22. Review.

PMID:
29477927
9.

Facile Arsenazo III-Based Assay for Monitoring Rare Earth Element Depletion from Cultivation Media for Methanotrophic and Methylotrophic Bacteria.

Hogendoorn C, Roszczenko-Jasińska P, Martinez-Gomez NC, de Graaff J, Grassl P, Pol A, Op den Camp HJM, Daumann LJ.

Appl Environ Microbiol. 2018 Apr 2;84(8). pii: e02887-17. doi: 10.1128/AEM.02887-17. Print 2018 Apr 15.

10.

Bioreactor virome metagenomics sequencing using DNA spike-ins.

Cremers G, Gambelli L, van Alen T, van Niftrik L, Op den Camp HJM.

PeerJ. 2018 Feb 7;6:e4351. doi: 10.7717/peerj.4351. eCollection 2018.

11.

Mutations in SELENBP1, encoding a novel human methanethiol oxidase, cause extraoral halitosis.

Pol A, Renkema GH, Tangerman A, Winkel EG, Engelke UF, de Brouwer APM, Lloyd KC, Araiza RS, van den Heuvel L, Omran H, Olbrich H, Oude Elberink M, Gilissen C, Rodenburg RJ, Sass JO, Schwab KO, Schäfer H, Venselaar H, Sequeira JS, Op den Camp HJM, Wevers RA.

Nat Genet. 2018 Jan;50(1):120-129. doi: 10.1038/s41588-017-0006-7. Epub 2017 Dec 18.

12.

Community Composition and Ultrastructure of a Nitrate-Dependent Anaerobic Methane-Oxidizing Enrichment Culture.

Gambelli L, Guerrero-Cruz S, Mesman RJ, Cremers G, Jetten MSM, Op den Camp HJM, Kartal B, Lueke C, van Niftrik L.

Appl Environ Microbiol. 2018 Jan 17;84(3). pii: e02186-17. doi: 10.1128/AEM.02186-17. Print 2018 Feb 1.

13.

Mimicking microbial interactions under nitrate-reducing conditions in an anoxic bioreactor: enrichment of novel Nitrospirae bacteria distantly related to Thermodesulfovibrio.

Arshad A, Dalcin Martins P, Frank J, Jetten MSM, Op den Camp HJM, Welte CU.

Environ Microbiol. 2017 Dec;19(12):4965-4977. doi: 10.1111/1462-2920.13977. Epub 2017 Nov 29.

PMID:
29105249
14.

Bacterial SBP56 identified as a Cu-dependent methanethiol oxidase widely distributed in the biosphere.

Eyice Ö, Myronova N, Pol A, Carrión O, Todd JD, Smith TJ, Gurman SJ, Cuthbertson A, Mazard S, Mennink-Kersten MA, Bugg TD, Andersson KK, Johnston AW, Op den Camp HJ, Schäfer H.

ISME J. 2018 Jan;12(1):145-160. doi: 10.1038/ismej.2017.148. Epub 2017 Oct 24.

15.

Ammonia Oxidation and Nitrite Reduction in the Verrucomicrobial Methanotroph Methylacidiphilum fumariolicum SolV.

Mohammadi SS, Pol A, van Alen T, Jetten MSM, Op den Camp HJM.

Front Microbiol. 2017 Sep 27;8:1901. doi: 10.3389/fmicb.2017.01901. eCollection 2017.

16.

Draft Genome Sequences of Two Gammaproteobacterial Methanotrophs Isolated from Rice Ecosystems.

Frindte K, Kalyuzhnaya MG, Bringel F, Dunfield PF, Jetten MSM, Khmelenina VN, Klotz MG, Murrell JC, Op den Camp HJM, Sakai Y, Semrau JD, Shapiro N, DiSpirito AA, Stein LY, Svenning MM, Trotsenko YA, Vuilleumier S, Woyke T, Knief C.

Genome Announc. 2017 Aug 17;5(33). pii: e00526-17. doi: 10.1128/genomeA.00526-17.

17.

Methylacidiphilum fumariolicum SolV, a thermoacidophilic 'Knallgas' methanotroph with both an oxygen-sensitive and -insensitive hydrogenase.

Mohammadi S, Pol A, van Alen TA, Jetten MS, Op den Camp HJ.

ISME J. 2017 Apr;11(4):945-958. doi: 10.1038/ismej.2016.171. Epub 2016 Dec 9.

18.

Ultrastructure and Viral Metagenome of Bacteriophages from an Anaerobic Methane Oxidizing Methylomirabilis Bioreactor Enrichment Culture.

Gambelli L, Cremers G, Mesman R, Guerrero S, Dutilh BE, Jetten MS, Op den Camp HJ, van Niftrik L.

Front Microbiol. 2016 Nov 8;7:1740. eCollection 2016.

19.

Nitrate- and nitrite-dependent anaerobic oxidation of methane.

Welte CU, Rasigraf O, Vaksmaa A, Versantvoort W, Arshad A, Op den Camp HJ, Jetten MS, Lüke C, Reimann J.

Environ Microbiol Rep. 2016 Dec;8(6):941-955. doi: 10.1111/1758-2229.12487. Epub 2016 Nov 9. Review.

PMID:
27753265
20.

New Methyloceanibacter diversity from North Sea sediments includes methanotroph containing solely the soluble methane monooxygenase.

Vekeman B, Kerckhof FM, Cremers G, de Vos P, Vandamme P, Boon N, Op den Camp HJ, Heylen K.

Environ Microbiol. 2016 Dec;18(12):4523-4536. doi: 10.1111/1462-2920.13485. Epub 2016 Sep 9.

PMID:
27501305
21.

Genome Characteristics of Two Novel Type I Methanotrophs Enriched from North Sea Sediments Containing Exclusively a Lanthanide-Dependent XoxF5-Type Methanol Dehydrogenase.

Vekeman B, Speth D, Wille J, Cremers G, De Vos P, Op den Camp HJ, Heylen K.

Microb Ecol. 2016 Oct;72(3):503-9. doi: 10.1007/s00248-016-0808-7. Epub 2016 Jul 25.

PMID:
27457652
22.

Branchial nitrogen cycle symbionts can remove ammonia in fish gills.

van Kessel MAHJ, Mesman RJ, Arshad A, Metz JR, Spanings FAT, van Dalen SCM, van Niftrik L, Flik G, Wendelaar Bonga SE, Jetten MSM, Klaren PHM, Op den Camp HJM.

Environ Microbiol Rep. 2016 Oct;8(5):590-594. doi: 10.1111/1758-2229.12407. Epub 2016 Apr 27.

PMID:
27040730
23.

Draft Genome Sequences of Gammaproteobacterial Methanotrophs Isolated from Marine Ecosystems.

Flynn JD, Hirayama H, Sakai Y, Dunfield PF, Klotz MG, Knief C, Op den Camp HJ, Jetten MS, Khmelenina VN, Trotsenko YA, Murrell JC, Semrau JD, Svenning MM, Stein LY, Kyrpides N, Shapiro N, Woyke T, Bringel F, Vuilleumier S, DiSpirito AA, Kalyuzhnaya MG.

Genome Announc. 2016 Jan 21;4(1). pii: e01629-15. doi: 10.1128/genomeA.01629-15.

24.

A Metagenomics-Based Metabolic Model of Nitrate-Dependent Anaerobic Oxidation of Methane by Methanoperedens-Like Archaea.

Arshad A, Speth DR, de Graaf RM, Op den Camp HJ, Jetten MS, Welte CU.

Front Microbiol. 2015 Dec 18;6:1423. doi: 10.3389/fmicb.2015.01423. eCollection 2015.

25.

Complete nitrification by a single microorganism.

van Kessel MA, Speth DR, Albertsen M, Nielsen PH, Op den Camp HJ, Kartal B, Jetten MS, Lücker S.

Nature. 2015 Dec 24;528(7583):555-9. doi: 10.1038/nature16459. Epub 2015 Nov 26.

26.

Nitrite-dependent anaerobic methane oxidizing bacteria along the water level fluctuation zone of the Three Gorges Reservoir.

Wang Y, Huang P, Ye F, Jiang Y, Song L, Op den Camp HJ, Zhu G, Wu S.

Appl Microbiol Biotechnol. 2016 Feb;100(4):1977-86. doi: 10.1007/s00253-015-7083-2. Epub 2015 Oct 29.

PMID:
26515563
27.

Plasmids from the gut microbiome of cabbage root fly larvae encode SaxA that catalyses the conversion of the plant toxin 2-phenylethyl isothiocyanate.

Welte CU, de Graaf RM, van den Bosch TJ, Op den Camp HJ, van Dam NM, Jetten MS.

Environ Microbiol. 2016 May;18(5):1379-90. doi: 10.1111/1462-2920.12997. Epub 2015 Sep 3.

PMID:
26234684
28.

Collembolan Transcriptomes Highlight Molecular Evolution of Hexapods and Provide Clues on the Adaptation to Terrestrial Life.

Faddeeva A, Studer RA, Kraaijeveld K, Sie D, Ylstra B, Mariën J, op den Camp HJ, Datema E, den Dunnen JT, van Straalen NM, Roelofs D.

PLoS One. 2015 Jun 15;10(6):e0130600. doi: 10.1371/journal.pone.0130600. eCollection 2015.

29.

Draft Genome Sequence of the Moderately Halophilic Methanotroph Methylohalobius crimeensis Strain 10Ki.

Sharp CE, Smirnova AV, Kalyuzhnaya MG, Bringel F, Hirayama H, Jetten MS, Khmelenina VN, Klotz MG, Knief C, Kyrpides N, Op den Camp HJ, Reshetnikov AS, Sakai Y, Shapiro N, Trotsenko YA, Vuilleumier S, Woyke T, Dunfield PF.

Genome Announc. 2015 Jun 11;3(3). pii: e00644-15. doi: 10.1128/genomeA.00644-15.

30.

Draft genomes of gammaproteobacterial methanotrophs isolated from terrestrial ecosystems.

Hamilton R, Kits KD, Ramonovskaya VA, Rozova ON, Yurimoto H, Iguchi H, Khmelenina VN, Sakai Y, Dunfield PF, Klotz MG, Knief C, Op den Camp HJ, Jetten MS, Bringel F, Vuilleumier S, Svenning MM, Shapiro N, Woyke T, Trotsenko YA, Stein LY, Kalyuzhnaya MG.

Genome Announc. 2015 Jun 4;3(3). pii: e00515-15. doi: 10.1128/genomeA.00515-15.

31.

Rhizobium Lipo-chitooligosaccharide Signaling Triggers Accumulation of Cytokinins in Medicago truncatula Roots.

van Zeijl A, Op den Camp RH, Deinum EE, Charnikhova T, Franssen H, Op den Camp HJ, Bouwmeester H, Kohlen W, Bisseling T, Geurts R.

Mol Plant. 2015 Aug;8(8):1213-26. doi: 10.1016/j.molp.2015.03.010. Epub 2015 Mar 21.

32.

Draft Genome Sequence of Anammox Bacterium "Candidatus Scalindua brodae," Obtained Using Differential Coverage Binning of Sequencing Data from Two Reactor Enrichments.

Speth DR, Russ L, Kartal B, Op den Camp HJ, Dutilh BE, Jetten MS.

Genome Announc. 2015 Jan 8;3(1). pii: e01415-14. doi: 10.1128/genomeA.01415-14.

33.

XoxF-type methanol dehydrogenase from the anaerobic methanotroph “Candidatus Methylomirabilis oxyfera”.

Wu ML, Wessels JC, Pol A, Op den Camp HJ, Jetten MS, van Niftrik L.

Appl Environ Microbiol. 2015 Feb;81(4):1442-51.

34.

The genomic landscape of the verrucomicrobial methanotroph Methylacidiphilum fumariolicum SolV.

Anvar SY, Frank J, Pol A, Schmitz A, Kraaijeveld K, den Dunnen JT, Op den Camp HJ.

BMC Genomics. 2014 Oct 20;15:914. doi: 10.1186/1471-2164-15-914.

35.

Expanding the verrucomicrobial methanotrophic world: description of three novel species of Methylacidimicrobium gen. nov.

van Teeseling MC, Pol A, Harhangi HR, van der Zwart S, Jetten MS, Op den Camp HJ, van Niftrik L.

Appl Environ Microbiol. 2014 Nov;80(21):6782-91. doi: 10.1128/AEM.01838-14. Epub 2014 Aug 29.

36.

PQQ-dependent methanol dehydrogenases: rare-earth elements make a difference.

Keltjens JT, Pol A, Reimann J, Op den Camp HJ.

Appl Microbiol Biotechnol. 2014;98(14):6163-83. doi: 10.1007/s00253-014-5766-8. Epub 2014 May 13. Review.

PMID:
24816778
37.

Interactions between anaerobic ammonium and sulfur-oxidizing bacteria in a laboratory scale model system.

Russ L, Speth DR, Jetten MS, Op den Camp HJ, Kartal B.

Environ Microbiol. 2014 Nov;16(11):3487-98. doi: 10.1111/1462-2920.12487. Epub 2014 May 20.

PMID:
24750895
38.

Coexistence of nitrifying, anammox and denitrifying bacteria in a sequencing batch reactor.

Langone M, Yan J, Haaijer SC, Op den Camp HJ, Jetten MS, Andreottola G.

Front Microbiol. 2014 Feb 4;5:28. doi: 10.3389/fmicb.2014.00028. eCollection 2014.

39.

Identification of the type II cytochrome c maturation pathway in anammox bacteria by comparative genomics.

Ferousi C, Speth DR, Reimann J, Op den Camp HJ, Allen JW, Keltjens JT, Jetten MS.

BMC Microbiol. 2013 Nov 23;13:265. doi: 10.1186/1471-2180-13-265.

40.

A new addition to the cell plan of anammox bacteria: "Candidatus Kuenenia stuttgartiensis" has a protein surface layer as the outermost layer of the cell.

van Teeseling MC, de Almeida NM, Klingl A, Speth DR, Op den Camp HJ, Rachel R, Jetten MS, van Niftrik L.

J Bacteriol. 2014 Jan;196(1):80-9. doi: 10.1128/JB.00988-13. Epub 2013 Oct 18.

41.

Rare earth metals are essential for methanotrophic life in volcanic mudpots.

Pol A, Barends TR, Dietl A, Khadem AF, Eygensteyn J, Jetten MS, Op den Camp HJ.

Environ Microbiol. 2014 Jan;16(1):255-64. doi: 10.1111/1462-2920.12249. Epub 2013 Sep 12.

PMID:
24034209
42.

Diversity and ecophysiology of new isolates of extremely acidophilic CS2-converting Acidithiobacillus strains.

Smeulders MJ, Pol A, Zandvoort MH, Jetten MS, Op den Camp HJ.

Appl Environ Microbiol. 2013 Nov;79(21):6784-94. doi: 10.1128/AEM.02167-13. Epub 2013 Aug 30.

43.

Presence and diversity of anammox bacteria in cold hydrocarbon-rich seeps and hydrothermal vent sediments of the Guaymas Basin.

Russ L, Kartal B, Op den Camp HJ, Sollai M, Le Bruchec J, Caprais JC, Godfroy A, Sinninghe Damsté JS, Jetten MS.

Front Microbiol. 2013 Aug 2;4:219. doi: 10.3389/fmicb.2013.00219. eCollection 2013.

44.

Bacterial CS2 hydrolases from Acidithiobacillus thiooxidans strains are homologous to the archaeal catenane CS2 hydrolase.

Smeulders MJ, Pol A, Venselaar H, Barends TR, Hermans J, Jetten MS, Op den Camp HJ.

J Bacteriol. 2013 Sep;195(18):4046-56. doi: 10.1128/JB.00627-13. Epub 2013 Jul 8.

45.

Draft Genome Sequence of Methylomicrobium buryatense Strain 5G, a Haloalkaline-Tolerant Methanotrophic Bacterium.

Khmelenina VN, Beck DA, Munk C, Davenport K, Daligault H, Erkkila T, Goodwin L, Gu W, Lo CC, Scholz M, Teshima H, Xu Y, Chain P, Bringel F, Vuilleumier S, Dispirito A, Dunfield P, Jetten MS, Klotz MG, Knief C, Murrell JC, Op den Camp HJ, Sakai Y, Semrau J, Svenning M, Stein LY, Trotsenko YA, Kalyuzhnaya MG.

Genome Announc. 2013 Jun 27;1(4). pii: e00053-13. doi: 10.1128/genomeA.00053-13.

46.

Evidence that the catenane form of CS2 hydrolase is not an artefact.

van Eldijk MB, van Leeuwen I, Mikhailov VA, Neijenhuis L, Harhangi HR, van Hest JC, Jetten MS, Op den Camp HJ, Robinson CV, Mecinović J.

Chem Commun (Camb). 2013 Sep 14;49(71):7770-2. doi: 10.1039/c3cc43219j.

PMID:
23771150
47.

Enrichment of an anammox bacterial community from a flooded paddy soil.

Hu BL, Shen LD, Liu S, Cai C, Chen TT, Kartal B, Harhangi HR, Op den Camp HJ, Lou LP, Xu XY, Zheng P, Jetten MS.

Environ Microbiol Rep. 2013 Jun;5(3):483-9. doi: 10.1111/1758-2229.12038. Epub 2013 Feb 28.

PMID:
23754729
48.

Genome Sequence of the Obligate Gammaproteobacterial Methanotroph Methylomicrobium album Strain BG8.

Kits KD, Kalyuzhnaya MG, Klotz MG, Jetten MS, Op den Camp HJ, Vuilleumier S, Bringel F, Dispirito AA, Murrell JC, Bruce D, Cheng JF, Copeland A, Goodwin L, Hauser L, Lajus A, Land ML, Lapidus A, Lucas S, Médigue C, Pitluck S, Woyke T, Zeytun A, Stein LY.

Genome Announc. 2013 Apr 11;1(2):e0017013. doi: 10.1128/genomeA.00170-13.

49.

A novel marine nitrite-oxidizing Nitrospira species from Dutch coastal North Sea water.

Haaijer SC, Ji K, van Niftrik L, Hoischen A, Speth D, Jetten MS, Damsté JS, Op den Camp HJ.

Front Microbiol. 2013 Mar 18;4:60. doi: 10.3389/fmicb.2013.00060. eCollection 2013.

50.

Differences in sequencing technologies improve the retrieval of anammox bacterial genome from metagenomes.

Gori F, Tringe SG, Folino G, van Hijum SA, Op den Camp HJ, Jetten MS, Marchiori E.

BMC Genomics. 2013 Jan 16;14:7. doi: 10.1186/1471-2164-14-7.

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