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Prediction of solar irradiance using ray-tracing techniques for coral macro- and micro-habitats.

Ong RH, King AJC, Caley MJ, Mullins BJ.

Mar Environ Res. 2018 Aug 11. pii: S0141-1136(17)30598-6. doi: 10.1016/j.marenvres.2018.08.004. [Epub ahead of print]


Measuring the impact of genetic knowledge on intentions and attitudes of the community towards expanded preconception carrier screening.

Ong R, Howting D, Rea A, Christian H, Charman P, Molster C, Ravenscroft G, Laing NG.

J Med Genet. 2018 Aug 1. pii: jmedgenet-2018-105362. doi: 10.1136/jmedgenet-2018-105362. [Epub ahead of print]


Clofazimine drug susceptibility testing for Mycobacterium tuberculosis: the case of using the right diluent.

Sng LH, Peh JWL, Lee Kee MT, Ya'akob NBM, Ong RT, Wong CW, Chee CBE, Wang YT.

Pathology. 2018 Aug;50(5):549-553. doi: 10.1016/j.pathol.2018.01.006. Epub 2018 Jun 8.


A Unique Case of Metastatic, Functional, Hereditary Paraganglioma Associated With an SDHC Germline Mutation.

Ong RKS, Flores SK, Reddick RL, Dahia PLM, Shawa H.

J Clin Endocrinol Metab. 2018 Aug 1;103(8):2802-2806. doi: 10.1210/jc.2017-01302.


Association of injury pattern and entrapment location inside damaged buildings in the 2016 Taiwan earthquake.

Pan ST, Cheng YY, Wu CL, Chang RH, Chiu C, Foo NP, Chen PT, Wang TY, Chen LH, Chen CJ, Ong R, Tsai CC, Hsu CC, Hsieh LW, Chi CH, Lin CH.

J Formos Med Assoc. 2018 May 29. pii: S0929-6646(18)30082-2. doi: 10.1016/j.jfma.2018.05.012. [Epub ahead of print]


Variants in ACTG2 underlie a substantial number of Australasian patients with primary chronic intestinal pseudo-obstruction.

Ravenscroft G, Pannell S, O'Grady G, Ong R, Ee HC, Faiz F, Marns L, Goel H, Kumarasinghe P, Sollis E, Sivadorai P, Wilson M, Magoffin A, Nightingale S, Freckmann ML, Kirk EP, Sachdev R, Lemberg DA, Delatycki MB, Kamm MA, Basnayake C, Lamont PJ, Amor DJ, Jones K, Schilperoort J, Davis MR, Laing NG.

Neurogastroenterol Motil. 2018 May 21:e13371. doi: 10.1111/nmo.13371. [Epub ahead of print]


Comparative whole-genome sequence analysis of Mycobacterium tuberculosis isolated from tuberculous meningitis and pulmonary tuberculosis patients.

Faksri K, Xia E, Ong RT, Tan JH, Nonghanphithak D, Makhao N, Thamnongdee N, Thanormchat A, Phurattanakornkul A, Rattanarangsee S, Ratanajaraya C, Suriyaphol P, Prammananan T, Teo YY, Chaiprasert A.

Sci Rep. 2018 Mar 20;8(1):4910. doi: 10.1038/s41598-018-23337-y.


Genetic relatedness of indigenous ethnic groups in northern Borneo to neighboring populations from Southeast Asia, as inferred from genome-wide SNP data.

Yew CW, Hoque MZ, Pugh-Kitingan J, Minsong A, Voo CLY, Ransangan J, Lau STY, Wang X, Saw WY, Ong RT, Teo YY, Xu S, Hoh BP, Phipps ME, Kumar SV.

Ann Hum Genet. 2018 Jul;82(4):216-226. doi: 10.1111/ahg.12246. Epub 2018 Mar 9.


Mutations in ATP1A1 Cause Dominant Charcot-Marie-Tooth Type 2.

Lassuthova P, Rebelo AP, Ravenscroft G, Lamont PJ, Davis MR, Manganelli F, Feely SM, Bacon C, Brožková DŠ, Haberlova J, Mazanec R, Tao F, Saghira C, Abreu L, Courel S, Powell E, Buglo E, Bis DM, Baxter MF, Ong RW, Marns L, Lee YC, Bai Y, Isom DG, Barro-Soria R, Chung KW, Scherer SS, Larsson HP, Laing NG, Choi BO, Seeman P, Shy ME, Santoro L, Zuchner S.

Am J Hum Genet. 2018 Mar 1;102(3):505-514. doi: 10.1016/j.ajhg.2018.01.023.


Genomic structure of the native inhabitants of Peninsular Malaysia and North Borneo suggests complex human population history in Southeast Asia.

Yew CW, Lu D, Deng L, Wong LP, Ong RT, Lu Y, Wang X, Yunus Y, Aghakhanian F, Mokhtar SS, Hoque MZ, Voo CL, Abdul Rahman T, Bhak J, Phipps ME, Xu S, Teo YY, Kumar SV, Hoh BP.

Hum Genet. 2018 Feb;137(2):161-173. doi: 10.1007/s00439-018-1869-0. Epub 2018 Jan 30.


Antibody-mediated enhancement aggravates chikungunya virus infection and disease severity.

Lum FM, Couderc T, Chia BS, Ong RY, Her Z, Chow A, Leo YS, Kam YW, Rénia L, Lecuit M, Ng LFP.

Sci Rep. 2018 Jan 30;8(1):1860. doi: 10.1038/s41598-018-20305-4.


Author Correction: Long-term carbon sink in Borneo's forests halted by drought and vulnerable to edges.

Qie L, Lewis SL, Sullivan MJP, Lopez-Gonzalez G, Pickavance GC, Sunderland T, Ashton P, Hubau W, Abu Salim K, Aiba SI, Banin LF, Berry N, Brearley FQ, Burslem DFRP, Dančák M, Davies SJ, Fredriksson G, Hamer KC, Hédl R, Kho LK, Kitayama K, Krisnawati H, Lhota S, Malhi Y, Maycock C, Metali F, Mirmanto E, Nagy L, Nilus R, Ong R, Pendry CA, Poulsen AD, Primack RB, Rutishauser E, Samsoedin I, Saragih B, Sist P, Ferry Slik JW, Sukri RS, Svátek M, Tan S, Tjoa A, van Nieuwstadt M, Vernimmen RRE, Yassir I, Kidd PS, Fitriadi M, Ideris NKH, Serudin RM, Abdullah Lim LS, Saparudin MS, Phillips OL.

Nat Commun. 2018 Jan 19;9(1):342. doi: 10.1038/s41467-018-02920-x.


Long-term carbon sink in Borneo's forests halted by drought and vulnerable to edge effects.

Qie L, Lewis SL, Sullivan MJP, Lopez-Gonzalez G, Pickavance GC, Sunderland T, Ashton P, Hubau W, Abu Salim K, Aiba SI, Banin LF, Berry N, Brearley FQ, Burslem DFRP, Dančák M, Davies SJ, Fredriksson G, Hamer KC, Hédl R, Kho LK, Kitayama K, Krisnawati H, Lhota S, Malhi Y, Maycock C, Metali F, Mirmanto E, Nagy L, Nilus R, Ong R, Pendry CA, Poulsen AD, Primack RB, Rutishauser E, Samsoedin I, Saragih B, Sist P, Slik JWF, Sukri RS, Svátek M, Tan S, Tjoa A, van Nieuwstadt M, Vernimmen RRE, Yassir I, Kidd PS, Fitriadi M, Ideris NKH, Serudin RM, Abdullah Lim LS, Saparudin MS, Phillips OL.

Nat Commun. 2017 Dec 19;8(1):1966. doi: 10.1038/s41467-017-01997-0. Erratum in: Nat Commun. 2018 Jan 19;9(1):342.


The SOF Truths for Army Special Operations Forces Surgical Teams.

Baker JB, Modlin RE, Ong RC, Remick KN.

J Spec Oper Med. Winter 2017;17(4):52-55.


Investigation of a cluster of multi-drug resistant tuberculosis in a high-rise apartment block in Singapore.

Ho ZJM, Chee CBE, Ong RT, Sng LH, Peh WLJ, Cook AR, Hsu LY, Wang YT, Koh HF, Lee VJM.

Int J Infect Dis. 2018 Feb;67:46-51. doi: 10.1016/j.ijid.2017.12.010. Epub 2017 Dec 15.


Simultaneous Glucagon and Vasoactive Intestinal Peptide Producing Pancreatic Neuroendocrine Tumors in a Patient With Multiple Endocrine Neoplasia Type 1: A Case Report and Literature Review.

Kim GY, Kim S, Ong RKS, Shawa H.

Pancreas. 2018 Jan;47(1):e1-e2. doi: 10.1097/MPA.0000000000000969. Review. No abstract available.


The effect of allometric scaling in coral thermal microenvironments.

Ong RH, King AJC, Kaandorp JA, Mullins BJ, Caley MJ.

PLoS One. 2017 Oct 12;12(10):e0184214. doi: 10.1371/journal.pone.0184214. eCollection 2017.


Psychiatric comorbidities and use of psychotropic medications in people with autism spectrum disorder in the United States.

Houghton R, Ong RC, Bolognani F.

Autism Res. 2017 Dec;10(12):2037-2047. doi: 10.1002/aur.1848. Epub 2017 Sep 30.


Resistance of tropical seedlings to drought is mediated by neighbourhood diversity.

O'Brien MJ, Reynolds G, Ong R, Hector A.

Nat Ecol Evol. 2017 Nov;1(11):1643-1648. doi: 10.1038/s41559-017-0326-0. Epub 2017 Sep 25.


Confronting online social aggression in Hong Kong: A wake-up call.

Ong R.

Int J Law Psychiatry. 2017 Sep - Oct;54:1-15. doi: 10.1016/j.ijlp.2017.07.001. Epub 2017 Aug 6. Review.


Establishing multiple omics baselines for three Southeast Asian populations in the Singapore Integrative Omics Study.

Saw WY, Tantoso E, Begum H, Zhou L, Zou R, He C, Chan SL, Tan LW, Wong LP, Xu W, Moong DKN, Lim Y, Li B, Pillai NE, Peterson TA, Bielawny T, Meikle PJ, Mundra PA, Lim WY, Luo M, Chia KS, Ong RT, Brunham LR, Khor CC, Too HP, Soong R, Wenk MR, Little P, Teo YY.

Nat Commun. 2017 Sep 21;8(1):653. doi: 10.1038/s41467-017-00413-x.


Water sorption in pretreated grasses as a predictor of enzymatic hydrolysis yields.

Williams DL, Crowe JD, Ong RG, Hodge DB.

Bioresour Technol. 2017 Dec;245(Pt A):242-249. doi: 10.1016/j.biortech.2017.08.200. Epub 2017 Sep 1.


Social isolation, loneliness and their relationships with depressive symptoms: A population-based study.

Ge L, Yap CW, Ong R, Heng BH.

PLoS One. 2017 Aug 23;12(8):e0182145. doi: 10.1371/journal.pone.0182145. eCollection 2017.


Identification of developmental stage and anatomical fraction contributions to cell wall recalcitrance in switchgrass.

Crowe JD, Feringa N, Pattathil S, Merritt B, Foster C, Dines D, Ong RG, Hodge DB.

Biotechnol Biofuels. 2017 Jul 15;10:184. doi: 10.1186/s13068-017-0870-5. eCollection 2017.


Impact of a Carbapenem Antimicrobial Stewardship Program on Patient Outcomes.

Seah VXF, Ong RYL, Lim ASY, Chong CY, Tan NWH, Thoon KC.

Antimicrob Agents Chemother. 2017 Aug 24;61(9). pii: e00736-17. doi: 10.1128/AAC.00736-17. Print 2017 Sep.


Delineation of an immunosuppressive gradient in hepatocellular carcinoma using high-dimensional proteomic and transcriptomic analyses.

Chew V, Lai L, Pan L, Lim CJ, Li J, Ong R, Chua C, Leong JY, Lim KH, Toh HC, Lee SY, Chan CY, Goh BKP, Chung A, Chow PKH, Albani S.

Proc Natl Acad Sci U S A. 2017 Jul 18;114(29):E5900-E5909. doi: 10.1073/pnas.1706559114. Epub 2017 Jul 3.


Clinical and Molecular Epidemiology of Carbapenem-Resistant Enterobacteriaceae Among Adult Inpatients in Singapore.

Marimuthu K, Venkatachalam I, Khong WX, Koh TH, Cherng BPZ, Van La M, De PP, Krishnan PU, Tan TY, Choon RFK, Pada SK, Lam CW, Ooi ST, Deepak RN, Smitasin N, Tan EL, Lee JJ, Kurup A, Young B, Sim NTW, Thoon KC, Fisher D, Ling ML, Peng BAS, Teo YY, Hsu LY, Lin RTP, Ong RT, Teo J, Ng OT; Carbapenemase-Producing Enterobacteriaceae in Singapore (CaPES) Study Group.

Clin Infect Dis. 2017 May 15;64(suppl_2):S68-S75. doi: 10.1093/cid/cix113.


Phylogeography of Y-chromosome haplogroup O3a2b2-N6 reveals patrilineal traces of Austronesian populations on the eastern coastal regions of Asia.

Wei LH, Yan S, Teo YY, Huang YZ, Wang LX, Yu G, Saw WY, Ong RT, Lu Y, Zhang C, Xu SH, Jin L, Li H.

PLoS One. 2017 Apr 5;12(4):e0175080. doi: 10.1371/journal.pone.0175080. eCollection 2017.


Intra-annual plasticity of growth mediates drought resilience over multiple years in tropical seedling communities.

O'Brien MJ, Ong R, Reynolds G.

Glob Chang Biol. 2017 Oct;23(10):4235-4244. doi: 10.1111/gcb.13658. Epub 2017 Mar 6.


Characterising private and shared signatures of positive selection in 37 Asian populations.

Liu X, Lu D, Saw WY, Shaw PJ, Wangkumhang P, Ngamphiw C, Fucharoen S, Lert-Itthiporn W, Chin-Inmanu K, Chau TN, Anders K, Kasturiratne A, de Silva HJ, Katsuya T, Kimura R, Nabika T, Ohkubo T, Tabara Y, Takeuchi F, Yamamoto K, Yokota M, Mamatyusupu D, Yang W, Chung YJ, Jin L, Hoh BP, Wickremasinghe AR, Ong RH, Khor CC, Dunstan SJ, Simmons C, Tongsima S, Suriyaphol P, Kato N, Xu S, Teo YY.

Eur J Hum Genet. 2017 Apr;25(4):499-508. doi: 10.1038/ejhg.2016.181. Epub 2017 Jan 18.


The value of biodiversity for the functioning of tropical forests: insurance effects during the first decade of the Sabah biodiversity experiment.

Tuck SL, O'Brien MJ, Philipson CD, Saner P, Tanadini M, Dzulkifli D, Godfray HC, Godoong E, Nilus R, Ong RC, Schmid B, Sinun W, Snaddon JL, Snoep M, Tangki H, Tay J, Ulok P, Wai YS, Weilenmann M, Reynolds G, Hector A.

Proc Biol Sci. 2016 Dec 14;283(1844). pii: 20161451.


Inhibition of microbial biofuel production in drought-stressed switchgrass hydrolysate.

Ong RG, Higbee A, Bottoms S, Dickinson Q, Xie D, Smith SA, Serate J, Pohlmann E, Jones AD, Coon JJ, Sato TK, Sanford GR, Eilert D, Oates LG, Piotrowski JS, Bates DM, Cavalier D, Zhang Y.

Biotechnol Biofuels. 2016 Nov 8;9:237. eCollection 2016.


Hoarding symptoms among psychiatric outpatients: confirmatory factor analysis and psychometric properties of the Saving Inventory - Revised (SI-R).

Lee SP, Ong C, Sagayadevan V, Ong R, Abdin E, Lim S, Vaingankar J, Picco L, Verma S, Chong SA, Subramaniam M.

BMC Psychiatry. 2016 Oct 26;16(1):364.


The contribution of recently identified adult BMI risk loci to paediatric obesity in a Singaporean Chinese childhood dataset.

Dorajoo R, Ong RT, Sim X, Wang L, Liu W, Tai ES, Liu J, Saw SM.

Pediatr Obes. 2017 Dec;12(6):e46-e50. doi: 10.1111/ijpo.12175. Epub 2016 Oct 25.


Bioinformatics tools and databases for whole genome sequence analysis of Mycobacterium tuberculosis.

Faksri K, Tan JH, Chaiprasert A, Teo YY, Ong RT.

Infect Genet Evol. 2016 Nov;45:359-368. doi: 10.1016/j.meegid.2016.09.013. Epub 2016 Sep 13. Review.


Whole-Genome Sequencing Analysis of Serially Isolated Multi-Drug and Extensively Drug Resistant Mycobacterium tuberculosis from Thai Patients.

Faksri K, Tan JH, Disratthakit A, Xia E, Prammananan T, Suriyaphol P, Khor CC, Teo YY, Ong RT, Chaiprasert A.

PLoS One. 2016 Aug 12;11(8):e0160992. doi: 10.1371/journal.pone.0160992. eCollection 2016.


mcr-1 in Multidrug-Resistant blaKPC-2-Producing Clinical Enterobacteriaceae Isolates in Singapore.

Teo JQ, Ong RT, Xia E, Koh TH, Khor CC, Lee SJ, Lim TP, Kwa AL.

Antimicrob Agents Chemother. 2016 Sep 23;60(10):6435-7. doi: 10.1128/AAC.00804-16. Print 2016 Oct. No abstract available.


Tracking inter-institutional spread of NDM and identification of a novel NDM-positive plasmid, pSg1-NDM, using next-generation sequencing approaches.

Khong WX, Marimuthu K, Teo J, Ding Y, Xia E, Lee JJ, Ong RT, Venkatachalam I, Cherng B, Pada SK, Choong WL, Smitasin N, Ooi ST, Deepak RN, Kurup A, Fong R, Van La M, Tan TY, Koh TH, Lin RT, Tan EL, Krishnan PU, Singh S, Pitout JD, Teo YY, Yang L, Ng OT; Carbapenemase-Producing Enterobacteriaceae in Singapore (CaPES) Study Group.

J Antimicrob Chemother. 2016 Nov;71(11):3081-3089. Epub 2016 Aug 2.


Pseudotuberculous Granulomatous Pyelitis.

Zhao Z, Ong RM, Goh CH, Loh HL.

Int J Surg Pathol. 2017 Feb;25(1):69-72. doi: 10.1177/1066896916660618. Epub 2016 Jul 28.


Local transmission and global dissemination of New Delhi Metallo-Beta-Lactamase (NDM): a whole genome analysis.

Khong WX, Xia E, Marimuthu K, Xu W, Teo YY, Tan EL, Neo S, Krishnan PU, Ang BS, Lye DC, Chow AL, Ong RT, Ng OT.

BMC Genomics. 2016 Jun 13;17:452. doi: 10.1186/s12864-016-2740-0.


Identifying Where REDD+ Financially Out-Competes Oil Palm in Floodplain Landscapes Using a Fine-Scale Approach.

Abram NK, MacMillan DC, Xofis P, Ancrenaz M, Tzanopoulos J, Ong R, Goossens B, Koh LP, Del Valle C, Peter L, Morel AC, Lackman I, Chung R, Kler H, Ambu L, Baya W, Knight AT.

PLoS One. 2016 Jun 8;11(6):e0156481. doi: 10.1371/journal.pone.0156481. eCollection 2016.


Reactive Infection Control Strategy for Control of New Delhi Metallo-β-Lactamase (NDM)-Producing Enterobacteriaceae Analyzed Using Whole-Genome Sequencing: Hits and Misses.

Marimuthu K, Ng OT, Khong WX, Xia E, Teo YY, Ong RT, Lye DC, Chow AL, Krishnan P, Ang BS.

Infect Control Hosp Epidemiol. 2016 Aug;37(8):987-90. doi: 10.1017/ice.2016.92. Epub 2016 May 4.


Genetic signatures of Mycobacterium tuberculosis Nonthaburi genotype revealed by whole genome analysis of isolates from tuberculous meningitis patients in Thailand.

Coker OO, Chaiprasert A, Ngamphiw C, Tongsima S, Regmi SM, Clark TG, Ong RT, Teo YY, Prammananan T, Palittapongarnpim P.

PeerJ. 2016 Apr 12;4:e1905. doi: 10.7717/peerj.1905. eCollection 2016.


SpoTyping: fast and accurate in silico Mycobacterium spoligotyping from sequence reads.

Xia E, Teo YY, Ong RT.

Genome Med. 2016 Feb 17;8(1):19. doi: 10.1186/s13073-016-0270-7.


A novel method for texture-mapping conoscopic surfaces for minimally invasive image-guided kidney surgery.

Ong R, Glisson CL, Burgner-Kahrs J, Simpson A, Danilchenko A, Lathrop R, Herrell SD, Webster RJ 3rd, Miga M, Galloway RL.

Int J Comput Assist Radiol Surg. 2016 Aug;11(8):1515-26. doi: 10.1007/s11548-015-1339-2. Epub 2016 Jan 13.


Discovering and validating between-subject variations in plasma lipids in healthy subjects.

Begum H, Li B, Shui G, Cazenave-Gassiot A, Soong R, Ong RT, Little P, Teo YY, Wenk MR.

Sci Rep. 2016 Jan 8;6:19139. doi: 10.1038/srep19139.


Strategies for the production of cell wall-deconstructing enzymes in lignocellulosic biomass and their utilization for biofuel production.

Park SH, Ong RG, Sticklen M.

Plant Biotechnol J. 2016 Jun;14(6):1329-44. doi: 10.1111/pbi.12505. Epub 2015 Dec 2. Review.


Controlling microbial contamination during hydrolysis of AFEX-pretreated corn stover and switchgrass: effects on hydrolysate composition, microbial response and fermentation.

Serate J, Xie D, Pohlmann E, Donald C Jr, Shabani M, Hinchman L, Higbee A, Mcgee M, La Reau A, Klinger GE, Li S, Myers CL, Boone C, Bates DM, Cavalier D, Eilert D, Oates LG, Sanford G, Sato TK, Dale B, Landick R, Piotrowski J, Ong RG, Zhang Y.

Biotechnol Biofuels. 2015 Nov 14;8:180. doi: 10.1186/s13068-015-0356-2. eCollection 2015.

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