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Items: 14

1.

Identification and characterization of metabolite quantitative trait loci in tomato leaves and comparison with those reported for fruits and seeds.

Nunes-Nesi A, Alseekh S, de Oliveira Silva FM, Omranian N, Lichtenstein G, Mirnezhad M, González RRR, Sabio Y Garcia J, Conte M, Leiss KA, Klinkhamer PGL, Nikoloski Z, Carrari F, Fernie AR.

Metabolomics. 2019 Mar 15;15(4):46. doi: 10.1007/s11306-019-1503-8.

2.

AtRsgA from Arabidopsis thaliana is important for maturation of the small subunit of the chloroplast ribosome.

Janowski M, Zoschke R, Scharff LB, Martinez Jaime S, Ferrari C, Proost S, Ng Wei Xiong J, Omranian N, Musialak-Lange M, Nikoloski Z, Graf A, Schöttler MA, Sampathkumar A, Vaid N, Mutwil M.

Plant J. 2018 Oct;96(2):404-420. doi: 10.1111/tpj.14040. Epub 2018 Sep 8.

PMID:
30044525
3.

Stoichiometric Correlation Analysis: Principles of Metabolic Functionality from Metabolomics Data.

Schwahn K, Beleggia R, Omranian N, Nikoloski Z.

Front Plant Sci. 2017 Dec 18;8:2152. doi: 10.3389/fpls.2017.02152. eCollection 2017.

4.

Computational Approaches to Study Gene Regulatory Networks.

Omranian N, Nikoloski Z.

Methods Mol Biol. 2017;1629:283-295. doi: 10.1007/978-1-4939-7125-1_18.

PMID:
28623592
5.

A network property necessary for concentration robustness.

Eloundou-Mbebi JM, Küken A, Omranian N, Kleessen S, Neigenfind J, Basler G, Nikoloski Z.

Nat Commun. 2016 Oct 19;7:13255. doi: 10.1038/ncomms13255.

6.

A Transcriptional and Metabolic Framework for Secondary Wall Formation in Arabidopsis.

Li Z, Omranian N, Neumetzler L, Wang T, Herter T, Usadel B, Demura T, Giavalisco P, Nikoloski Z, Persson S.

Plant Physiol. 2016 Oct;172(2):1334-1351. Epub 2016 Aug 26.

7.

Gene regulatory network inference using fused LASSO on multiple data sets.

Omranian N, Eloundou-Mbebi JM, Mueller-Roeber B, Nikoloski Z.

Sci Rep. 2016 Feb 11;6:20533. doi: 10.1038/srep20533.

8.

Genetic Determinants of the Network of Primary Metabolism and Their Relationships to Plant Performance in a Maize Recombinant Inbred Line Population.

Wen W, Li K, Alseekh S, Omranian N, Zhao L, Zhou Y, Xiao Y, Jin M, Yang N, Liu H, Florian A, Li W, Pan Q, Nikoloski Z, Yan J, Fernie AR.

Plant Cell. 2015 Jul;27(7):1839-56. doi: 10.1105/tpc.15.00208. Epub 2015 Jul 17.

9.

Differential metabolic and coexpression networks of plant metabolism.

Omranian N, Kleessen S, Tohge T, Klie S, Basler G, Mueller-Roeber B, Fernie AR, Nikoloski Z.

Trends Plant Sci. 2015 May;20(5):266-268. doi: 10.1016/j.tplants.2015.02.002. Epub 2015 Mar 16.

PMID:
25791509
10.

Identification and mode of inheritance of quantitative trait loci for secondary metabolite abundance in tomato.

Alseekh S, Tohge T, Wendenberg R, Scossa F, Omranian N, Li J, Kleessen S, Giavalisco P, Pleban T, Mueller-Roeber B, Zamir D, Nikoloski Z, Fernie AR.

Plant Cell. 2015 Mar;27(3):485-512. doi: 10.1105/tpc.114.132266. Epub 2015 Mar 13.

11.

Segmentation of biological multivariate time-series data.

Omranian N, Mueller-Roeber B, Nikoloski Z.

Sci Rep. 2015 Mar 11;5:8937. doi: 10.1038/srep08937.

12.

Network-based segmentation of biological multivariate time series.

Omranian N, Klie S, Mueller-Roeber B, Nikoloski Z.

PLoS One. 2013 May 7;8(5):e62974. doi: 10.1371/journal.pone.0062974. Print 2013.

13.

Effect of salt stress on genes encoding translation-associated proteins in Arabidopsis thaliana.

Omidbakhshfard MA, Omranian N, Ahmadi FS, Nikoloski Z, Mueller-Roeber B.

Plant Signal Behav. 2012 Sep 1;7(9):1095-102. doi: 10.4161/psb.21218. Epub 2012 Aug 17.

14.

PageRank-based identification of signaling crosstalk from transcriptomics data: the case of Arabidopsis thaliana.

Omranian N, Mueller-Roeber B, Nikoloski Z.

Mol Biosyst. 2012 Apr;8(4):1121-7. doi: 10.1039/c2mb05365a. Epub 2012 Feb 10.

PMID:
22327945

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