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Novel Intersubunit Interaction Critical for HIV-1 Core Assembly Defines a Potentially Targetable Inhibitor Binding Pocket.

Craveur P, Gres AT, Kirby KA, Liu D, Hammond JA, Deng Y, Forli S, Goodsell DS, Williamson JR, Sarafianos SG, Olson AJ.

MBio. 2019 Mar 12;10(2). pii: e02858-18. doi: 10.1128/mBio.02858-18.


Keeping a Flexible Differential Diagnosis: an Exercise in Clinical Reasoning.

Bergl PA, Manesh R, Basel D, Olson APJ.

J Gen Intern Med. 2019 Mar 7. doi: 10.1007/s11606-019-04867-1. [Epub ahead of print] No abstract available.


Allogeneic Transplantation after Myeloablative Rituximab/BEAM +/- Bortezomib for Patients with Relapsed/Refractory Lymphoid Malignancies: 5-Year Follow-up Results.

Chamoun K, Milton DR, Ledesma C, Young KH, Jabbour EJ, Alatrash G, Anderlini P, Bashir Q, Ciurea SO, Marin D, Molldrem JJ, Olson AL, Oran B, Popat UR, Rondon G, Champlin RE, Gulbis AM, Khouri IF.

Biol Blood Marrow Transplant. 2019 Feb 28. pii: S1083-8791(19)30147-8. doi: 10.1016/j.bbmt.2019.02.022. [Epub ahead of print]


Pilot Study to Evaluate the Adjunct Use of a Povidone-Iodine Topical Antiseptic in Patients with Soft Tissue Abscesses.

Olson AS, Rosenblatt L, Salerno N, Odette J, Ren R, Emanuel T, Michalek J, Liu Q, Du L, Jahangir K, Schmitz GR.

J Emerg Med. 2019 Feb 27. pii: S0736-4679(18)31218-6. doi: 10.1016/j.jemermed.2018.12.026. [Epub ahead of print]


A poxvirus pseudokinase represses viral DNA replication via a pathway antagonized by its paralog kinase.

Olson AT, Wang Z, Rico AB, Wiebe MS.

PLoS Pathog. 2019 Feb 15;15(2):e1007608. doi: 10.1371/journal.ppat.1007608. eCollection 2019 Feb.


Radiochemical isolation method for the production of 52gMn from natCr for accelerator targets.

Barrett KE, Aluicio-Sarduy E, Olson AP, Kutyreff CJ, Ellison PA, Barnhart TE, Nickles RJ, Engle JW.

Appl Radiat Isot. 2019 Apr;146:99-103. doi: 10.1016/j.apradiso.2019.01.025. Epub 2019 Feb 1.


Impact of Donor Type and Melphalan Dose on Allogeneic Transplantation Outcomes for Patients with Lymphoma.

Saini NY, Saliba RM, Rondon G, Maadani F, Popat U, Hosing CM, Betul O, Bashir Q, Olson A, Nieto Y, Alousi A, Kebriaei P, Srour S, Mehta R, Anderlini P, Shpall EJ, Qazilbash MH, Khouri IF, Fayad L, Lee H, Fowler N, Parmar S, Westin J, Hagemeister F, Champlin RE, Ciurea SO.

Biol Blood Marrow Transplant. 2019 Feb 11. pii: S1083-8791(19)30097-7. doi: 10.1016/j.bbmt.2019.02.002. [Epub ahead of print]


Massive-Scale Binding Free Energy Simulations of HIV Integrase Complexes Using Asynchronous Replica Exchange Framework Implemented on the IBM WCG Distributed Network.

Xia J, Flynn W, Gallicchio E, Uplinger K, Armstrong JD, Forli S, Olson AJ, Levy RM.

J Chem Inf Model. 2019 Feb 22. doi: 10.1021/acs.jcim.8b00817. [Epub ahead of print]


Independent or codependent?-industry, academics, and the publication of medical research.

Heston TF, Olson AH.

Ann Transl Med. 2018 Dec;6(Suppl 2):S115. doi: 10.21037/atm.2018.11.70. No abstract available.


Dual Modality Radiation With External Beam Radiation Therapy and Transarterial Radioembolization for Hepatocellular Carcinoma With Gross Vascular Invasion.

McGee HM, King MJ, Özbek U, Olson A, Kim E, Fischman AM, Schwartz M, Rosenzweig KE, Buckstein M.

Am J Clin Oncol. 2019 Feb 6. doi: 10.1097/COC.0000000000000523. [Epub ahead of print]


Past tree influence and prescribed fire exert strong controls on reassembly of mountain grasslands after tree removal.

Halpern CB, Antos JA, Kothari S, Olson AM.

Ecol Appl. 2019 Jan 31:e01860. doi: 10.1002/eap.1860. [Epub ahead of print]


Faculty Assessment of Emergency Medicine Resident Grit: A Multicenter Study.

Olson N, Olson AS, Williamson K, Hartman N, Branzetti J, Lank P; Emergency Medicine Education Research Alliance (EMERA).

AEM Educ Train. 2018 Dec 20;3(1):6-13. doi: 10.1002/aet2.10309. eCollection 2019 Jan.


Deletion of the p16INK4a tumor suppressor and expression of the androgen receptor induce sarcomatoid carcinomas with signet ring cells in the mouse prostate.

Lee DH, Yu EJ, Aldahl J, Yang J, He Y, Hooker E, Le V, Mi J, Olson A, Wu H, Geradts J, Xiao GQ, Gonzalgo ML, Cardiff RD, Sun Z.

PLoS One. 2019 Jan 24;14(1):e0211153. doi: 10.1371/journal.pone.0211153. eCollection 2019.


Serotonin and neuropeptides are both released by the HSN command neuron to initiate Caenorhabditis elegans egg laying.

Brewer JC, Olson AC, Collins KM, Koelle MR.

PLoS Genet. 2019 Jan 24;15(1):e1007896. doi: 10.1371/journal.pgen.1007896. eCollection 2019 Jan.


Spin current generation and relaxation in a quenched spin-orbit-coupled Bose-Einstein condensate.

Li CH, Qu C, Niffenegger RJ, Wang SJ, He M, Blasing DB, Olson AJ, Greene CH, Lyanda-Geller Y, Zhou Q, Zhang C, Chen YP.

Nat Commun. 2019 Jan 22;10(1):375. doi: 10.1038/s41467-018-08119-4.


CellPAINT: Interactive Illustration of Dynamic Mesoscale Cellular Environments.

Gardner A, Autin L, Barbaro B, Olson AJ, Goodsell DS.

IEEE Comput Graph Appl. 2018 Nov-Dec;38(6):51-66. doi: 10.1109/MCG.2018.2877076.


Announcing the Journal of Hospital Medicine Editorial Fellowship.

Wray CM, Olson A, Shah SS, Auerbach AD.

J Hosp Med. 2019 Jan;14(1):8. doi: 10.12788/jhm.3132.


Asynchronous Curriculum "Socially Synchronized": Learning Via Competition.

Smart J, Olson AS, Muck A.

West J Emerg Med. 2019 Jan;20(1):6-8. doi: 10.5811/westjem.2018.10.39829. Epub 2018 Nov 30.


NovoGraph: Human genome graph construction from multiple long-read de novo assemblies.

Biederstedt E, Oliver JC, Hansen NF, Jajoo A, Dunn N, Olson A, Busby B, Dilthey AT.

Version 2. F1000Res. 2018 Sep 3 [revised 2018 Jan 1];7:1391. doi: 10.12688/f1000research.15895.2. eCollection 2018.


Microglia are effector cells of CD47-SIRPα antiphagocytic axis disruption against glioblastoma.

Hutter G, Theruvath J, Graef CM, Zhang M, Schoen MK, Manz EM, Bennett ML, Olson A, Azad TD, Sinha R, Chan C, Assad Kahn S, Gholamin S, Wilson C, Grant G, He J, Weissman IL, Mitra SS, Cheshier SH.

Proc Natl Acad Sci U S A. 2019 Jan 15;116(3):997-1006. doi: 10.1073/pnas.1721434116. Epub 2019 Jan 2.


Estimating the Fitness Effect of Deleterious Mutations During the Two Phases of the Life Cycle: A New Method Applied to the Root-Rot Fungus Heterobasidion parviporum.

Clergeot PH, Rode NO, Glémin S, Brandström Durling M, Ihrmark K, Olson Å.

Genetics. 2019 Mar;211(3):963-976. doi: 10.1534/genetics.118.301855. Epub 2018 Dec 31.


The epidemiology of idiopathic pulmonary fibrosis and interstitial lung diseases at risk of a progressive-fibrosing phenotype.

Olson AL, Gifford AH, Inase N, Fernández Pérez ER, Suda T.

Eur Respir Rev. 2018 Dec 21;27(150). pii: 180077. doi: 10.1183/16000617.0077-2018. Print 2018 Dec 31. Review.


Transforming community-based pharmacy practice through financially sustainable centers for health and personal care.

Schommer JC, Olson AW, Isetts BJ.

J Am Pharm Assoc (2003). 2018 Dec 17. pii: S1544-3191(18)30439-4. doi: 10.1016/j.japh.2018.10.009. [Epub ahead of print]


Multivariate Computational Analysis of Gamma Delta T Cell Inhibitory Receptor Signatures Reveals the Divergence of Healthy and ART-Suppressed HIV+ Aging.

Belkina AC, Starchenko A, Drake KA, Proctor EA, Pihl RMF, Olson A, Lauffenburger DA, Lin N, Snyder-Cappione JE.

Front Immunol. 2018 Dec 5;9:2783. doi: 10.3389/fimmu.2018.02783. eCollection 2018.


Noninvasive Detection of Tuberculosis by Oral Swab Analysis.

Luabeya AK, Wood RC, Shenje J, Filander E, Ontong C, Mabwe S, Africa H, Nguyen FK, Olson A, Weigel KM, Jones-Engel L, Hatherill M, Cangelosi GA.

J Clin Microbiol. 2019 Feb 27;57(3). pii: e01847-18. doi: 10.1128/JCM.01847-18. Print 2019 Mar.


The Basement Flight

Pande CK, Berk J, Jassal MS, Manesh R, Olson AP.

J Hosp Med. 2019 Jan 8;14(1):51-55. doi: 10.12788/jhm.3096. Epub 2018 Nov 28.


Third party, umbilical cord blood derived regulatory T-cells for prevention of graft versus host disease in allogeneic hematopoietic stem cell transplantation: feasibility, safety and immune reconstitution.

Kellner JN, Delemarre EM, Yvon E, Nierkens S, Boelens JJ, McNiece I, Olson A, Nieto Y, Ciurea S, Popat U, Ahmed S, Champlin R, Ramos J, Nishimoto M, Ma H, Ke Z, Thall P, Khoury JD, Negrin R, Andersson B, Parmar S.

Oncotarget. 2018 Nov 2;9(86):35611-35622. doi: 10.18632/oncotarget.26242. eCollection 2018 Nov 2.


General Cognitive Ability as an Early Indicator of Problem Behavior Among Toddlers in Foster Care.

Olson AE, Kim HK, Bruce J, Fisher PA.

J Dev Behav Pediatr. 2019 Feb/Mar;40(2):144-149. doi: 10.1097/DBP.0000000000000632.


Rheumatoid Arthritis-Interstitial Lung Disease in the United States: Prevalence, Incidence, and Healthcare Costs and Mortality.

Raimundo K, Solomon JJ, Olson AL, Kong AM, Cole AL, Fischer A, Swigris JJ.

J Rheumatol. 2018 Nov 15. pii: jrheum.171315. doi: 10.3899/jrheum.171315. [Epub ahead of print] Erratum in: J Rheumatol. 2019 Feb;46(2):218.


PARP1 Trapping by PARP Inhibitors Drives Cytotoxicity in Both Cancer Cells and Healthy Bone Marrow.

Hopkins TA, Ainsworth WB, Ellis PA, Donawho CK, DiGiammarino EL, Panchal SC, Abraham VC, Algire MA, Shi Y, Olson AM, Johnson EF, Wilsbacher JL, Maag D.

Mol Cancer Res. 2019 Feb;17(2):409-419. doi: 10.1158/1541-7786.MCR-18-0138. Epub 2018 Nov 14.


Learning from tragedy: the Julia Berg story.

Graber ML, Berg D, Jerde W, Kibort P, Olson APJ, Parkash V.

Diagnosis (Berl). 2018 Nov 27;5(4):257-266. doi: 10.1515/dx-2018-0067.


Estimating survival for renal cell carcinoma patients with brain metastases: an update of the Renal Graded Prognostic Assessment tool.

Sperduto PW, Deegan BJ, Li J, Jethwa KR, Brown PD, Lockney N, Beal K, Rana NG, Attia A, Tseng CL, Sahgal A, Shanley R, Sperduto WA, Lou E, Zahra A, Buatti JM, Yu JB, Chiang V, Molitoris JK, Masucci L, Roberge D, Shi DD, Shih HA, Olson A, Kirkpatrick JP, Braunstein S, Sneed P, Mehta MP.

Neuro Oncol. 2018 Nov 12;20(12):1652-1660. doi: 10.1093/neuonc/noy099.


The Assessment of Reasoning Tool (ART): structuring the conversation between teachers and learners.

Thammasitboon S, Rencic JJ, Trowbridge RL, Olson APJ, Sur M, Dhaliwal G.

Diagnosis (Berl). 2018 Nov 27;5(4):197-203. doi: 10.1515/dx-2018-0052.


Donor NKG2C Copy Number: An Independent Predictor for CMV Reactivation After Double Cord Blood Transplantation.

Cao K, Marin D, Sekine T, Rondon G, Zhao W, Smith NT, Daher M, Wang Q, Li L, Saliba RM, Pingali R, Popat U, Hosing C, Olson A, Oran B, Basar R, Mehta RS, Champlin R, Shpall EJ, Rezvani K.

Front Immunol. 2018 Oct 23;9:2444. doi: 10.3389/fimmu.2018.02444. eCollection 2018.


RPC4046, a Monoclonal Antibody Against IL13, Reduces Histologic and Endoscopic Activity in Patients With Eosinophilic Esophagitis.

Hirano I, Collins MH, Assouline-Dayan Y, Evans L, Gupta S, Schoepfer AM, Straumann A, Safroneeva E, Grimm M, Smith H, Tompkins CA, Woo A, Peach R, Frohna P, Gujrathi S, Penenberg DN, Li C, Opiteck GJ, Olson A, Aranda R, Rothenberg ME, Dellon ES; HEROES Study Group.

Gastroenterology. 2019 Feb;156(3):592-603.e10. doi: 10.1053/j.gastro.2018.10.051. Epub 2018 Nov 2.


Fludarabine with a higher versus lower dose of myeloablative timed-sequential busulfan in older patients and patients with comorbidities: an open-label, non-stratified, randomised phase 2 trial.

Popat UR, Mehta RS, Bassett R, Chen J, Valdez BC, Kawedia J, Ahmed S, Alousi AM, Anderlini P, Al-Atrash G, Bashir Q, Ciurea SO, Hosing CM, Im JS, Jones R, Kebriaei P, Khouri I, Marin D, Nieto Y, Olson A, Oran B, Parmar S, Rezvani K, Qazilbash MH, Shah N, Srour SA, Shpall EJ, Champlin RE, Andersson BS.

Lancet Haematol. 2018 Nov;5(11):e532-e542. doi: 10.1016/S2352-3026(18)30156-X.


Dynamin impacts homology-directed repair and breast cancer response to chemotherapy.

Chernikova SB, Nguyen RB, Truong JT, Mello SS, Stafford JH, Hay MP, Olson A, Solow-Cordero DE, Wood DJ, Henry S, von Eyben R, Deng L, Gephart MH, Aroumougame A, Wiese C, Game JC, Győrffy B, Brown JM.

J Clin Invest. 2018 Dec 3;128(12):5307-5321. doi: 10.1172/JCI87191. Epub 2018 Oct 29.


A Simpler Answer - After All This Time.

Coetzee DJ, Vercellotti G, Olson APJ.

Am J Med. 2019 Feb;132(2):e37-e38. doi: 10.1016/j.amjmed.2018.09.032. Epub 2018 Oct 25. No abstract available.


Learning from tragedy - improving diagnosis through case reviews.

Olson APJ, Graber ML.

Diagnosis (Berl). 2018 Nov 27;5(4):171-173. doi: 10.1515/dx-2018-0068. No abstract available.


Case-based simulation empowering pediatric residents to communicate about diagnostic uncertainty.

Olson ME, Borman-Shoap E, Mathias K, Barnes TL, Olson APJ.

Diagnosis (Berl). 2018 Nov 27;5(4):243-248. doi: 10.1515/dx-2018-0025.


Transcriptional regulation of nitrogen-associated metabolism and growth.

Gaudinier A, Rodriguez-Medina J, Zhang L, Olson A, Liseron-Monfils C, Bågman AM, Foret J, Abbitt S, Tang M, Li B, Runcie DE, Kliebenstein DJ, Shen B, Frank MJ, Ware D, Brady SM.

Nature. 2018 Nov;563(7730):259-264. doi: 10.1038/s41586-018-0656-3. Epub 2018 Oct 24.


A composite disease activity index for early drug development in ulcerative colitis: development and validation of the UC-100 score.

Jairath V, Jeyarajah J, Zou G, Parker CE, Olson A, Khanna R, D'Haens GR, Sandborn WJ, Feagan BG.

Lancet Gastroenterol Hepatol. 2019 Jan;4(1):63-70. doi: 10.1016/S2468-1253(18)30306-6. Epub 2018 Oct 18.


Allogeneic BK Virus-Specific T Cells for Progressive Multifocal Leukoencephalopathy.

Muftuoglu M, Olson A, Marin D, Ahmed S, Mulanovich V, Tummala S, Chi TL, Ferrajoli A, Kaur I, Li L, Champlin R, Shpall EJ, Rezvani K.

N Engl J Med. 2018 Oct 11;379(15):1443-1451. doi: 10.1056/NEJMoa1801540.


Thoraco-Abdominal Abnormalities in Bardet-Biedl Syndrome: Situs Inversus and Heterotaxy.

Olson AJ, Krentz AD, Finta KM, Okorie UC, Haws RM.

J Pediatr. 2019 Jan;204:31-37. doi: 10.1016/j.jpeds.2018.08.068. Epub 2018 Oct 4.


Teaching about diagnostic errors through virtual patient cases: a pilot exploration.

Geha R, Trowbridge RL, Dhaliwal G, Olson APJ.

Diagnosis (Berl). 2018 Nov 27;5(4):223-227. doi: 10.1515/dx-2018-0023.


Cardiac Management of the Patient With Duchenne Muscular Dystrophy.

Buddhe S, Cripe L, Friedland-Little J, Kertesz N, Eghtesady P, Finder J, Hor K, Judge DP, Kinnett K, McNally EM, Raman S, Thompson WR, Wagner KR, Olson AK.

Pediatrics. 2018 Oct;142(Suppl 2):S72-S81. doi: 10.1542/peds.2018-0333I.


Health-Related Quality of Life in Children and Young Adults with Marfan Syndrome.

Handisides JC, Hollenbeck-Pringle D, Uzark K, Trachtenberg FL, Pemberton VL, Atz TW, Bradley TJ, Cappella E, De Nobele S, Groh GK, Hamstra MS, Korsin R, Levine JC, Lindauer B, Liou A, Neal MKM, Markham LW, Morrison T, Mussatto KA, Olson AK, Pierpont MEM, Pyeritz RE, Radojewski EA, Roman MJ, Xu M, Lacro RV; Pediatric Heart Network Investigators.

J Pediatr. 2019 Jan;204:250-255.e1. doi: 10.1016/j.jpeds.2018.08.061. Epub 2018 Sep 27.


Side-by-side biochemical comparison of two lytic polysaccharide monooxygenases from the white-rot fungus Heterobasidion irregulare on their activity against crystalline cellulose and glucomannan.

Liu B, Krishnaswamyreddy S, Muraleedharan MN, Olson Å, Broberg A, Ståhlberg J, Sandgren M.

PLoS One. 2018 Sep 5;13(9):e0203430. doi: 10.1371/journal.pone.0203430. eCollection 2018.


Improving diagnosis by improving education: a policy brief on education in healthcare professions.

Graber ML, Rencic J, Rusz D, Papa F, Croskerry P, Zierler B, Harkless G, Giuliano M, Schoenbaum S, Colford C, Cahill M, Olson APJ.

Diagnosis (Berl). 2018 Sep 25;5(3):107-118. doi: 10.1515/dx-2018-0033. No abstract available.


Labels on Levels: Labeling of Multi-Scale Multi-Instance and Crowded 3D Biological Environments.

Kouril D, Cmolik L, Kozlikova B, Wu HY, Johnson G, Goodsell DS, Olson A, Groller ME, Viola I.

IEEE Trans Vis Comput Graph. 2018 Aug 20. doi: 10.1109/TVCG.2018.2864491. [Epub ahead of print]


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