Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 50 of 66

1.

Genome mapping of seed-borne allergens and immunoresponsive proteins in wheat.

Juhász A, Belova T, Florides CG, Maulis C, Fischer I, Gell G, Birinyi Z, Ong J, Keeble-Gagnère G, Maharajan A, Ma W, Gibson P, Jia J, Lang D, Mayer KFX, Spannagl M; International Wheat Genome Sequencing Consortium, Tye-Din JA, Appels R, Olsen OA.

Sci Adv. 2018 Aug 17;4(8):eaar8602. doi: 10.1126/sciadv.aar8602. eCollection 2018 Aug.

2.

Shifting the limits in wheat research and breeding using a fully annotated reference genome.

International Wheat Genome Sequencing Consortium (IWGSC); IWGSC RefSeq principal investigators:, Appels R, Eversole K, Feuillet C, Keller B, Rogers J, Stein N; IWGSC whole-genome assembly principal investigators:, Pozniak CJ, Stein N, Choulet F, Distelfeld A, Eversole K, Poland J, Rogers J, Ronen G, Sharpe AG; Whole-genome sequencing and assembly:, Pozniak C, Ronen G, Stein N, Barad O, Baruch K, Choulet F, Keeble-Gagnère G, Mascher M, Sharpe AG, Ben-Zvi G, Josselin AA; Hi-C data-based scaffolding:, Stein N, Mascher M, Himmelbach A; Whole-genome assembly quality control and analyses:, Choulet F, Keeble-Gagnère G, Mascher M, Rogers J, Balfourier F, Gutierrez-Gonzalez J, Hayden M, Josselin AA, Koh C, Muehlbauer G, Pasam RK, Paux E, Pozniak CJ, Rigault P, Sharpe AG, Tibbits J, Tiwari V; Pseudomolecule assembly:, Choulet F, Keeble-Gagnère G, Mascher M, Josselin AA, Rogers J; RefSeq genome structure and gene analyses:, Spannagl M, Choulet F, Lang D, Gundlach H, Haberer G, Keeble-Gagnère G, Mayer KFX, Ormanbekova D, Paux E, Prade V, Šimková H, Wicker T; Automated annotation:, Choulet F, Spannagl M, Swarbreck D, Rimbert H, Felder M, Guilhot N, Gundlach H, Haberer G, Kaithakottil G, Keilwagen J, Lang D, Leroy P, Lux T, Mayer KFX, Twardziok S, Venturini L; Manual gene curation:, Appels R, Rimbert H, Choulet F, Juhász A, Keeble-Gagnère G; Subgenome comparative analyses:, Choulet F, Spannagl M, Lang D, Abrouk M, Haberer G, Keeble-Gagnère G, Mayer KFX, Wicker T; Transposable elements:, Choulet F, Wicker T, Gundlach H, Lang D, Spannagl M; Phylogenomic analyses:, Lang D, Spannagl M, Appels R, Fischer I; Transcriptome analyses and RNA-seq data:, Uauy C, Borrill P, Ramirez-Gonzalez RH, Appels R, Arnaud D, Chalabi S, Chalhoub B, Choulet F, Cory A, Datla R, Davey MW, Hayden M, Jacobs J, Lang D, Robinson SJ, Spannagl M, Steuernagel B, Tibbits J, Tiwari V, van Ex F, Wulff BBH; Whole-genome methylome:, Pozniak CJ, Robinson SJ, Sharpe AG, Cory A; Histone mark analyses:, Benhamed M, Paux E, Bendahmane A, Concia L, Latrasse D; BAC chromosome MTP IWGSC–Bayer Whole-Genome Profiling (WGP) tags:, Rogers J, Jacobs J, Alaux M, Appels R, Bartoš J, Bellec A, Berges H, Doležel J, Feuillet C, Frenkel Z, Gill B, Korol A, Letellier T, Olsen OA, Šimková H, Singh K, Valárik M, van der Vossen E, Vautrin S, Weining S; Chromosome LTC mapping and physical mapping quality control:, Korol A, Frenkel Z, Fahima T, Glikson V, Raats D, Rogers J; RH mapping:, Tiwari V, Gill B, Paux E, Poland J; Optical mapping:, Doležel J, Číhalíková J, Šimková H, Toegelová H, Vrána J; Recombination analyses:, Sourdille P, Darrier B; Gene family analyses:, Appels R, Spannagl M, Lang D, Fischer I, Ormanbekova D, Prade V; CBF gene family:, Barabaschi D, Cattivelli L; Dehydrin gene family:, Hernandez P, Galvez S, Budak H; NLR gene family:, Steuernagel B, Jones JDG, Witek K, Wulff BBH, Yu G; PPR gene family:, Small I, Melonek J, Zhou R; Prolamin gene family:, Juhász A, Belova T, Appels R, Olsen OA; WAK gene family:, Kanyuka K, King R; Stem solidness (SSt1) QTL team:, Nilsen K, Walkowiak S, Pozniak CJ, Cuthbert R, Datla R, Knox R, Wiebe K, Xiang D; Flowering locus C (FLC) gene team:, Rohde A, Golds T; Genome size analysis:, Doležel J, Čížková J, Tibbits J; MicroRNA and tRNA annotation:, Budak H, Akpinar BA, Biyiklioglu S; Genetic maps and mapping:, Muehlbauer G, Poland J, Gao L, Gutierrez-Gonzalez J, N'Daiye A; BAC libraries and chromosome sorting:, Doležel J, Šimková H, Číhalíková J, Kubaláková M, Šafář J, Vrána J; BAC pooling, BAC library repository, and access:, Berges H, Bellec A, Vautrin S; IWGSC sequence and data repository and access:, Alaux M, Alfama F, Adam-Blondon AF, Flores R, Guerche C, Letellier T, Loaec M, Quesneville H; Physical maps and BAC-based sequences:; 1A BAC sequencing and assembly:, Pozniak CJ, Sharpe AG, Walkowiak S, Budak H, Condie J, Ens J, Koh C, Maclachlan R, Tan Y, Wicker T; 1B BAC sequencing and assembly:, Choulet F, Paux E, Alberti A, Aury JM, Balfourier F, Barbe V, Couloux A, Cruaud C, Labadie K, Mangenot S, Wincker P; 1D, 4D, and 6D physical mapping:, Gill B, Kaur G, Luo M, Sehgal S; 2AL physical mapping:, Singh K, Chhuneja P, Gupta OP, Jindal S, Kaur P, Malik P, Sharma P, Yadav B; 2AS physical mapping:, Singh NK, Khurana J, Chaudhary C, Khurana P, Kumar V, Mahato A, Mathur S, Sevanthi A, Sharma N, Tomar RS; 2B, 2D, 4B, 5BL, and 5DL IWGSC–Bayer Whole-Genome Profiling (WGP) physical maps:, Rogers J, Jacobs J, Alaux M, Bellec A, Berges H, Doležel J, Feuillet C, Frenkel Z, Gill B, Korol A, van der Vossen E, Vautrin S; 3AL physical mapping:, Gill B, Kaur G, Luo M, Sehgal S; 3DS physical mapping and BAC sequencing and assembly:, Bartoš J, Holušová K, Plíhal O; 3DL BAC sequencing and assembly:, Clark MD, Heavens D, Kettleborough G, Wright J; 4A physical mapping, BAC sequencing, assembly, and annotation:, Valárik M, Abrouk M, Balcárková B, Holušová K, Hu Y, Luo M; 5BS BAC sequencing and assembly:, Salina E, Ravin N, Skryabin K, Beletsky A, Kadnikov V, Mardanov A, Nesterov M, Rakitin A, Sergeeva E; 6B BAC sequencing and assembly:, Handa H, Kanamori H, Katagiri S, Kobayashi F, Nasuda S, Tanaka T, Wu J; 7A physical mapping and BAC sequencing:, Appels R, Hayden M, Keeble-Gagnère G, Rigault P, Tibbits J; 7B physical mapping, BAC sequencing, and assembly:, Olsen OA, Belova T, Cattonaro F, Jiumeng M, Kugler K, Mayer KFX, Pfeifer M, Sandve S, Xun X, Zhan B; 7DS BAC sequencing and assembly:, Šimková H, Abrouk M, Batley J, Bayer PE, Edwards D, Hayashi S, Toegelová H, Tulpová Z, Visendi P; 7DL physical mapping and BAC sequencing:, Weining S, Cui L, Du X, Feng K, Nie X, Tong W, Wang L; Figures:, Borrill P, Gundlach H, Galvez S, Kaithakottil G, Lang D, Lux T, Mascher M, Ormanbekova D, Prade V, Ramirez-Gonzalez RH, Spannagl M, Stein N, Uauy C, Venturini L; Manuscript writing team:, Stein N, Appels R, Eversole K, Rogers J, Borrill P, Cattivelli L, Choulet F, Hernandez P, Kanyuka K, Lang D, Mascher M, Nilsen K, Paux E, Pozniak CJ, Ramirez-Gonzalez RH, Šimková H, Small I, Spannagl M, Swarbreck D, Uauy C.

Science. 2018 Aug 17;361(6403). pii: eaar7191. doi: 10.1126/science.aar7191. Epub 2018 Aug 16.

PMID:
30115783
3.

An intragenic mutagenesis strategy in Physcomitrella patens to preserve intron splicing.

Ako AE, Perroud PF, Innocent J, Demko V, Olsen OA, Johansen W.

Sci Rep. 2017 Jul 11;7(1):5111. doi: 10.1038/s41598-017-05309-w.

4.

The DEK1 Calpain Linker Functions in Three-Dimensional Body Patterning in Physcomitrella patens.

Johansen W, Ako AE, Demko V, Perroud PF, Rensing SA, Mekhlif AK, Olsen OA.

Plant Physiol. 2016 Oct;172(2):1089-1104. Epub 2016 Aug 9.

5.

The phenotype of the CRINKLY4 deletion mutant of Physcomitrella patens suggests a broad role in developmental regulation in early land plants.

Demko V, Ako E, Perroud PF, Quatrano R, Olsen OA.

Planta. 2016 Jul;244(1):275-84. doi: 10.1007/s00425-016-2526-2. Epub 2016 Apr 21.

PMID:
27100110
6.

Chloroplast phylogeny of Triticum/Aegilops species is not incongruent with an ancient homoploid hybrid origin of the ancestor of the bread wheat D-genome.

Sandve SR, Marcussen T, Mayer K, Jakobsen KS, Heier L, Steuernagel B, Wulff BB, Olsen OA.

New Phytol. 2015 Oct;208(1):9-10. doi: 10.1111/nph.13487. Epub 2015 May 21. No abstract available.

7.

DEK1; missing piece in puzzle of plant development.

Olsen OA, Perroud PF, Johansen W, Demko V.

Trends Plant Sci. 2015 Feb;20(2):70-1. doi: 10.1016/j.tplants.2015.01.003. Epub 2015 Jan 20.

PMID:
25612461
8.

Genetic analysis of DEFECTIVE KERNEL1 loop function in three-dimensional body patterning in Physcomitrella patens.

Demko V, Perroud PF, Johansen W, Delwiche CF, Cooper ED, Remme P, Ako AE, Kugler KG, Mayer KF, Quatrano R, Olsen OA.

Plant Physiol. 2014 Oct;166(2):903-19. doi: 10.1104/pp.114.243758. Epub 2014 Sep 2.

9.

Utilization of deletion bins to anchor and order sequences along the wheat 7B chromosome.

Belova T, Grønvold L, Kumar A, Kianian S, He X, Lillemo M, Springer NM, Lien S, Olsen OA, Sandve SR.

Theor Appl Genet. 2014 Sep;127(9):2029-40. doi: 10.1007/s00122-014-2358-z. Epub 2014 Aug 19.

PMID:
25134516
10.

Ancient hybridizations among the ancestral genomes of bread wheat.

Marcussen T, Sandve SR, Heier L, Spannagl M, Pfeifer M; International Wheat Genome Sequencing Consortium,, Jakobsen KS, Wulff BB, Steuernagel B, Mayer KF, Olsen OA.

Science. 2014 Jul 18;345(6194):1250092. doi: 10.1126/science.1250092.

11.

Genome interplay in the grain transcriptome of hexaploid bread wheat.

Pfeifer M, Kugler KG, Sandve SR, Zhan B, Rudi H, Hvidsten TR; International Wheat Genome Sequencing Consortium, Mayer KF, Olsen OA.

Science. 2014 Jul 18;345(6194):1250091. doi: 10.1126/science.1250091.

12.

Defective Kernel 1 (DEK1) is required for three-dimensional growth in Physcomitrella patens.

Perroud PF, Demko V, Johansen W, Wilson RC, Olsen OA, Quatrano RS.

New Phytol. 2014 Aug;203(3):794-804. doi: 10.1111/nph.12844. Epub 2014 May 21.

13.

The catalytic domain CysPc of the DEK1 calpain is functionally conserved in land plants.

Liang Z, Demko V, Wilson RC, Johnson KA, Ahmad R, Perroud PF, Quatrano R, Zhao S, Shalchian-Tabrizi K, Otegui MS, Olsen OA, Johansen W.

Plant J. 2013 Sep;75(5):742-54. doi: 10.1111/tpj.12235. Epub 2013 Jun 13.

14.

Integration of mate pair sequences to improve shotgun assemblies of flow-sorted chromosome arms of hexaploid wheat.

Belova T, Zhan B, Wright J, Caccamo M, Asp T, Simková H, Kent M, Bendixen C, Panitz F, Lien S, Doležel J, Olsen OA, Sandve SR.

BMC Genomics. 2013 Apr 4;14:222. doi: 10.1186/1471-2164-14-222.

15.

Massive expansion of the calpain gene family in unicellular eukaryotes.

Zhao S, Liang Z, Demko V, Wilson R, Johansen W, Olsen OA, Shalchian-Tabrizi K.

BMC Evol Biol. 2012 Sep 29;12:193. doi: 10.1186/1471-2148-12-193.

16.

Broad neutralization coverage of HIV by multiple highly potent antibodies.

Walker LM, Huber M, Doores KJ, Falkowska E, Pejchal R, Julien JP, Wang SK, Ramos A, Chan-Hui PY, Moyle M, Mitcham JL, Hammond PW, Olsen OA, Phung P, Fling S, Wong CH, Phogat S, Wrin T, Simek MD; Protocol G Principal Investigators, Koff WC, Wilson IA, Burton DR, Poignard P.

Nature. 2011 Sep 22;477(7365):466-70. doi: 10.1038/nature10373.

17.

Human antibodies reveal a protective epitope that is highly conserved among human and nonhuman influenza A viruses.

Grandea AG 3rd, Olsen OA, Cox TC, Renshaw M, Hammond PW, Chan-Hui PY, Mitcham JL, Cieplak W, Stewart SM, Grantham ML, Pekosz A, Kiso M, Shinya K, Hatta M, Kawaoka Y, Moyle M.

Proc Natl Acad Sci U S A. 2010 Jul 13;107(28):12658-63. doi: 10.1073/pnas.0911806107. Epub 2010 Jul 1.

18.

Broad and potent neutralizing antibodies from an African donor reveal a new HIV-1 vaccine target.

Walker LM, Phogat SK, Chan-Hui PY, Wagner D, Phung P, Goss JL, Wrin T, Simek MD, Fling S, Mitcham JL, Lehrman JK, Priddy FH, Olsen OA, Frey SM, Hammond PW; Protocol G Principal Investigators, Kaminsky S, Zamb T, Moyle M, Koff WC, Poignard P, Burton DR.

Science. 2009 Oct 9;326(5950):285-9. doi: 10.1126/science.1178746. Epub 2009 Sep 3.

19.

A system for monitoring physical activity data among people with type 2 diabetes.

Arsand E, Olsen OA, Varmedal R, Mortensen W, Hartvigsen G.

Stud Health Technol Inform. 2008;136:113-8.

PMID:
18487717
20.

Subcellular localization and functional domain studies of DEFECTIVE KERNEL1 in maize and Arabidopsis suggest a model for aleurone cell fate specification involving CRINKLY4 and SUPERNUMERARY ALEURONE LAYER1.

Tian Q, Olsen L, Sun B, Lid SE, Brown RC, Lemmon BE, Fosnes K, Gruis DF, Opsahl-Sorteberg HG, Otegui MS, Olsen OA.

Plant Cell. 2007 Oct;19(10):3127-45. Epub 2007 Oct 12.

21.

The Arabidopsis thaliana AT PRP39-1 gene, encoding a tetratricopeptide repeat protein with similarity to the yeast pre-mRNA processing protein PRP39, affects flowering time.

Wang C, Tian Q, Hou Z, Mucha M, Aukerman M, Olsen OA.

Plant Cell Rep. 2007 Aug;26(8):1357-66. Epub 2007 Mar 23.

PMID:
17380304
22.

Generation and characterization of human monoclonal neutralizing antibodies with distinct binding and sequence features against SARS coronavirus using XenoMouse.

Coughlin M, Lou G, Martinez O, Masterman SK, Olsen OA, Moksa AA, Farzan M, Babcook JS, Prabhakar BS.

Virology. 2007 Apr 25;361(1):93-102. Epub 2006 Dec 11.

23.

Surface position, not signaling from surrounding maternal tissues, specifies aleurone epidermal cell fate in maize.

Gruis DF, Guo H, Selinger D, Tian Q, Olsen OA.

Plant Physiol. 2006 Jul;141(3):898-909. Epub 2006 May 12. Erratum in: Plant Physiol. 2006 Dec;142(4):1771.

24.

Biochemical characterization of a truncated penta-EF-hand Ca2+ binding protein from maize.

Barry JK, Selinger DA, Wang C, Olsen OA, Rao AG.

Biochim Biophys Acta. 2006 Feb;1764(2):239-45. Epub 2005 Oct 21.

PMID:
16269278
25.

Recognition of human cytomegalovirus by human primary immunoglobulins identifies an innate foundation to an adaptive immune response.

McLean GR, Olsen OA, Watt IN, Rathanaswami P, Leslie KB, Babcook JS, Schrader JW.

J Immunol. 2005 Apr 15;174(8):4768-78.

26.

Mutation in the Arabidopisis thaliana DEK1 calpain gene perturbs endosperm and embryo development while over-expression affects organ development globally.

Lid SE, Olsen L, Nestestog R, Aukerman M, Brown RC, Lemmon B, Mucha M, Opsahl-Sorteberg HG, Olsen OA.

Planta. 2005 Jun;221(3):339-51. Epub 2005 Jan 13.

PMID:
15647902
27.
28.

Nuclear endosperm development in cereals and Arabidopsis thaliana.

Olsen OA.

Plant Cell. 2004;16 Suppl:S214-27. Epub 2004 Mar 9. Review. No abstract available.

29.

The maize disorganized aleurone layer 1 and 2 ( dil1, dil2) mutants lack control of the mitotic division plane in the aleurone layer of developing endosperm.

Lid SE, Al RH, Krekling T, Meeley RB, Ranch J, Opsahl-Ferstad HG, Olsen OA.

Planta. 2004 Jan;218(3):370-8. Epub 2003 Oct 14.

PMID:
14557881
30.

The calpain domain of the maize DEK1 protein contains the conserved catalytic triad and functions as a cysteine proteinase.

Wang C, Barry JK, Min Z, Tordsen G, Rao AG, Olsen OA.

J Biol Chem. 2003 Sep 5;278(36):34467-74. Epub 2003 Jun 24.

31.

sal1 determines the number of aleurone cell layers in maize endosperm and encodes a class E vacuolar sorting protein.

Shen B, Li C, Min Z, Meeley RB, Tarczynski MC, Olsen OA.

Proc Natl Acad Sci U S A. 2003 May 27;100(11):6552-7. Epub 2003 May 15.

32.

Zea mays ZmMybst1 cDNA, encodes a single Myb-repeat protein with the VASHAQKYF motif.

Mercy IS, Meeley RB, Nichols SE, Olsen OA.

J Exp Bot. 2003 Mar;54(384):1117-9.

PMID:
12598583
33.

Isolation of GUS marker lines for genes expressed in Arabidopsis endosperm, embryo and maternal tissues.

Stangeland B, Salehian Z, Aalen R, Mandal A, Olsen OA.

J Exp Bot. 2003 Jan;54(381):279-90.

PMID:
12493855
34.

The defective kernel 1 (dek1) gene required for aleurone cell development in the endosperm of maize grains encodes a membrane protein of the calpain gene superfamily.

Lid SE, Gruis D, Jung R, Lorentzen JA, Ananiev E, Chamberlin M, Niu X, Meeley R, Nichols S, Olsen OA.

Proc Natl Acad Sci U S A. 2002 Apr 16;99(8):5460-5. Epub 2002 Apr 2.

35.

ENDOSPERM DEVELOPMENT: Cellularization and Cell Fate Specification.

Olsen OA.

Annu Rev Plant Physiol Plant Mol Biol. 2001 Jun;52:233-267.

PMID:
11337398
37.

Developmental biology of the cereal endosperm.

Olsen OA, Linnestad C, Nichols SE.

Trends Plant Sci. 1999 Jul;4(7):253-257.

PMID:
10407440
38.
39.

Nucellain, a barley homolog of the dicot vacuolar-processing protease, is localized in nucellar cell walls.

Linnestad C, Doan DN, Brown RC, Lemmon BE, Meyer DJ, Jung R, Olsen OA.

Plant Physiol. 1998 Dec;118(4):1169-80.

40.

Endosperm developments

Olsen OA.

Plant Cell. 1998 Apr;10(4):485-8. No abstract available.

42.

Barley elongation factor 1 alpha: genomic organization, DNA sequence, and phylogenetic implications.

Nielsen PS, Kleinhofs A, Olsen OA.

Genome. 1997 Aug;40(4):559-65.

PMID:
9276939
43.
44.

A novel strategy for generating monoclonal antibodies from single, isolated lymphocytes producing antibodies of defined specificities.

Babcook JS, Leslie KB, Olsen OA, Salmon RA, Schrader JW.

Proc Natl Acad Sci U S A. 1996 Jul 23;93(15):7843-8.

45.

Isolation of molecular markers from the barley endosperm coenocyte and the surrounding nucellus cell layers.

Doan DN, Linnestad C, Olsen OA.

Plant Mol Biol. 1996 Jul;31(4):877-86.

PMID:
8806417
46.

A single gene encodes two different transcripts for the ADP-glucose pyrophosphorylase small subunit from barley (Hordeum vulgare).

Thorbjørnsen T, Villand P, Kleczkowski LA, Olsen OA.

Biochem J. 1996 Jan 1;313 ( Pt 1):149-54.

47.
48.

Endosperm Development in Barley: Microtubule Involvement in the Morphogenetic Pathway.

Brown RC, Lemmon BE, Olsen OA.

Plant Cell. 1994 Sep;6(9):1241-1252.

50.

Mapping of the ADP-glucose pyrophosphorylase genes in barley.

Kilian A, Kleinhofs A, Villand P, Thorbjørnsen T, Olsen OA, Kleczkowski LA.

Theor Appl Genet. 1994 Feb;87(7):869-71. doi: 10.1007/BF00221140.

PMID:
24190474

Supplemental Content

Loading ...
Support Center