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Noise robust bird call localisation using the generalised cross-correlation with phase transform in the wavelet domain.

Ollivier B, Pepperell A, Halstead Z, Hioka Y.

J Acoust Soc Am. 2019 Dec;146(6):4650. doi: 10.1121/1.5138593.


Hydrostatic Pressure Helps to Cultivate an Original Anaerobic Bacterium From the Atlantis Massif Subseafloor (IODP Expedition 357): Petrocella atlantisensis gen. nov. sp. nov.

Quéméneur M, Erauso G, Frouin E, Zeghal E, Vandecasteele C, Ollivier B, Tamburini C, Garel M, Ménez B, Postec A.

Front Microbiol. 2019 Jul 16;10:1497. doi: 10.3389/fmicb.2019.01497. eCollection 2019.


A two genes - for - one gene interaction between Leptosphaeria maculans and Brassica napus.

Petit-Houdenot Y, Degrave A, Meyer M, Blaise F, Ollivier B, Marais CL, Jauneau A, Audran C, Rivas S, Veneault-Fourrey C, Brun H, Rouxel T, Fudal I, Balesdent MH.

New Phytol. 2019 Jul;223(1):397-411. doi: 10.1111/nph.15762. Epub 2019 Apr 5.


Towards a congruent reclassification and nomenclature of the thermophilic species of the genus Pseudothermotoga within the order Thermotogales.

Belahbib H, Summers ZM, Fardeau ML, Joseph M, Tamburini C, Dolla A, Ollivier B, Armougom F.

Syst Appl Microbiol. 2018 Nov;41(6):555-563. doi: 10.1016/j.syapm.2018.04.007. Epub 2018 May 16.


Archaea: Microbial Candidates in Next-generation Probiotics Development.

Brugère JF, Ben Hania W, Arnal ME, Ribière C, Ballet N, Vandeckerkove P, Ollivier B, O'Toole PW.

J Clin Gastroenterol. 2018 Nov/Dec;52 Suppl 1, Proceedings from the 9th Probiotics, Prebiotics and New Foods, Nutraceuticals and Botanicals for Nutrition & Human and Microbiota Health Meeting, held in Rome, Italy from September 10 to 12, 2017:S71-S73. doi: 10.1097/MCG.0000000000001043.


Diversity of Rare and Abundant Prokaryotic Phylotypes in the Prony Hydrothermal Field and Comparison with Other Serpentinite-Hosted Ecosystems.

Frouin E, Bes M, Ollivier B, Quéméneur M, Postec A, Debroas D, Armougom F, Erauso G.

Front Microbiol. 2018 Feb 6;9:102. doi: 10.3389/fmicb.2018.00102. eCollection 2018.


Obligate sugar oxidation in Mesotoga spp., phylum Thermotogae, in the presence of either elemental sulfur or hydrogenotrophic sulfate-reducers as electron acceptor.

Fadhlaoui K, Ben Hania W, Armougom F, Bartoli M, Fardeau ML, Erauso G, Brasseur G, Aubert C, Hamdi M, Brochier-Armanet C, Dolla A, Ollivier B.

Environ Microbiol. 2018 Jan;20(1):281-292. doi: 10.1111/1462-2920.13995. Epub 2017 Dec 7.


Genome Sequence of Piezophilic Bacterium Desulfovibrio profundus Strain 500-1, Isolated from a Deep Sediment Layer in the Japan Sea.

Fouteau S, Guerin T, Magdelenat G, Roumagnac M, Bartoli M, Ollivier B, Dolla A, Barbe V, Pradel N.

Genome Announc. 2017 Nov 2;5(44). pii: e01181-17. doi: 10.1128/genomeA.01181-17.


Desulfonatronum parangueonense sp. nov., a sulfate-reducing bacterium isolated from sediment of an alkaline crater lake.

Pérez Bernal MF, Souza Brito EM, Bartoli M, Aubé J, Fardeau ML, Cuevas Rodriguez G, Ollivier B, Guyoneaud R, Hirschler-Réa A.

Int J Syst Evol Microbiol. 2017 Dec;67(12):4999-5005. doi: 10.1099/ijsem.0.002399. Epub 2017 Oct 17.


Microbial Diversity in Sulfate-Reducing Marine Sediment Enrichment Cultures Associated with Anaerobic Biotransformation of Coastal Stockpiled Phosphogypsum (Sfax, Tunisia).

Zouch H, Karray F, Armougom F, Chifflet S, Hirschler-Réa A, Kharrat H, Kamoun L, Ben Hania W, Ollivier B, Sayadi S, Quéméneur M.

Front Microbiol. 2017 Aug 21;8:1583. doi: 10.3389/fmicb.2017.01583. eCollection 2017.


Characterization of recombinant Trypanosoma brucei gambiense Translationally Controlled Tumor Protein (rTbgTCTP) and its interaction with Glossina midgut bacteria.

Bossard G, Bartoli M, Fardeau ML, Holzmuller P, Ollivier B, Geiger A.

Gut Microbes. 2017 Sep 3;8(5):413-427. doi: 10.1080/19490976.2017.1331833. Epub 2017 Jun 6.


Unusual evolutionary mechanisms to escape effector-triggered immunity in the fungal phytopathogen Leptosphaeria maculans.

Plissonneau C, Blaise F, Ollivier B, Leflon M, Carpezat J, Rouxel T, Balesdent MH.

Mol Ecol. 2017 Apr;26(7):2183-2198. doi: 10.1111/mec.14046. Epub 2017 Mar 13.


Objection to the proposition of the new genus Abyssivirga.

Postec A, Ollivier B, Fardeau ML.

Int J Syst Evol Microbiol. 2017 Jan;67(1):174. doi: 10.1099/ijsem.0.001601. Epub 2017 Feb 20. No abstract available.


Paludifilum halophilum gen. nov., sp. nov., a thermoactinomycete isolated from superficial sediment of a solar saltern.

Frikha-Dammak D, Fardeau ML, Cayol JL, Ben Fguira-Fourati L, Najeh S, Ollivier B, Maalej S.

Int J Syst Evol Microbiol. 2016 Dec;66(12):5371-5378. doi: 10.1099/ijsem.0.001523. Epub 2016 Sep 25.


Metagenomic and PCR-Based Diversity Surveys of [FeFe]-Hydrogenases Combined with Isolation of Alkaliphilic Hydrogen-Producing Bacteria from the Serpentinite-Hosted Prony Hydrothermal Field, New Caledonia.

Mei N, Postec A, Monnin C, Pelletier B, Payri CE, Ménez B, Frouin E, Ollivier B, Erauso G, Quéméneur M.

Front Microbiol. 2016 Aug 30;7:1301. doi: 10.3389/fmicb.2016.01301. eCollection 2016.


Balneicella halophila gen. nov., sp. nov., an anaerobic bacterium, isolated from a thermal spring and description of Balneicellaceae fam. nov.

Fadhlaoui K, Ben Hania W, Postec A, Hamdi M, Ollivier B, Fardeau ML.

Int J Syst Evol Microbiol. 2016 Nov;66(11):4692-4696. doi: 10.1099/ijsem.0.001412. Epub 2016 Sep 6.


Serpentinicella alkaliphila gen. nov., sp. nov., a novel alkaliphilic anaerobic bacterium isolated from the serpentinite-hosted Prony hydrothermal field, New Caledonia.

Mei N, Postec A, Erauso G, Joseph M, Pelletier B, Payri C, Ollivier B, Quéméneur M.

Int J Syst Evol Microbiol. 2016 Nov;66(11):4464-4470. doi: 10.1099/ijsem.0.001375. Epub 2016 Aug 4.


Desulfotomaculum aquiferis sp. nov. and Desulfotomaculum profundi sp. nov., isolated from a deep natural gas storage aquifer.

Berlendis S, Ranchou-Peyruse M, Fardeau ML, Lascourrèges JF, Joseph M, Ollivier B, Aüllo T, Dequidt D, Magot M, Ranchou-Peyruse A.

Int J Syst Evol Microbiol. 2016 Nov;66(11):4329-4338. doi: 10.1099/ijsem.0.001352. Epub 2016 Jul 28.


Deciphering the adaptation strategies of Desulfovibrio piezophilus to hydrostatic pressure through metabolic and transcriptional analyses.

Amrani A, van Helden J, Bergon A, Aouane A, Ben Hania W, Tamburini C, Loriod B, Imbert J, Ollivier B, Pradel N, Dolla A.

Environ Microbiol Rep. 2016 Aug;8(4):520-6. doi: 10.1111/1758-2229.12427.


Preservation of ancestral Cretaceous microflora recovered from a hypersaline oil reservoir.

Gales G, Tsesmetzis N, Neria I, Alazard D, Coulon S, Lomans BP, Morin D, Ollivier B, Borgomano J, Joulian C.

Sci Rep. 2016 Mar 11;6:22960. doi: 10.1038/srep22960.


Novel serine keratinase from Caldicoprobacter algeriensis exhibiting outstanding hide dehairing abilities.

Bouacem K, Bouanane-Darenfed A, Zaraî Jaouadi N, Joseph M, Hacene H, Ollivier B, Fardeau ML, Bejar S, Jaouadi B.

Int J Biol Macromol. 2016 May;86:321-8. doi: 10.1016/j.ijbiomac.2016.01.074. Epub 2016 Jan 23.


A game of hide and seek between avirulence genes AvrLm4-7 and AvrLm3 in Leptosphaeria maculans.

Plissonneau C, Daverdin G, Ollivier B, Blaise F, Degrave A, Fudal I, Rouxel T, Balesdent MH.

New Phytol. 2016 Mar;209(4):1613-24. doi: 10.1111/nph.13736. Epub 2015 Nov 23.


Draft genome sequence of Mesotoga strain PhosAC3, a mesophilic member of the bacterial order Thermotogales, isolated from a digestor treating phosphogypsum in Tunisia.

Ben Hania W, Fadhlaoui K, Brochier-Armanet C, Persillon C, Postec A, Hamdi M, Dolla A, Ollivier B, Fardeau ML, Le Mer J, Erauso G.

Stand Genomic Sci. 2015 May 1;10:12. doi: 10.1186/1944-3277-10-12. eCollection 2015.


Microbial diversity in a submarine carbonate edifice from the serpentinizing hydrothermal system of the Prony Bay (New Caledonia) over a 6-year period.

Postec A, Quéméneur M, Bes M, Mei N, Benaïssa F, Payri C, Pelletier B, Monnin C, Guentas-Dombrowsky L, Ollivier B, Gérard E, Pisapia C, Gérard M, Ménez B, Erauso G.

Front Microbiol. 2015 Aug 27;6:857. doi: 10.3389/fmicb.2015.00857. eCollection 2015.


Magnetotactic bacteria population in a pristine French Atlantic lagoon.

Pradel N, Fuduche M, Ollivier B.

Environ Sci Pollut Res Int. 2016 Jan;23(1):691-7. doi: 10.1007/s11356-015-5322-9. Epub 2015 Sep 3.


Reclassification of Acetomicrobium faecale as Caldicoprobacter faecalis comb. nov.

Bouanane-Darenfed A, Ben Hania W, Cayol JL, Ollivier B, Fardeau ML.

Int J Syst Evol Microbiol. 2015 Oct;65(10):3286-8. doi: 10.1099/ijsem.0.000409. Epub 2015 Jul 1.


Fusibacter fontis sp. nov., a sulfur-reducing, anaerobic bacterium isolated from a mesothermic Tunisian spring.

Fadhlaoui K, Ben Hania W, Postec A, Fauque G, Hamdi M, Ollivier B, Fardeau ML.

Int J Syst Evol Microbiol. 2015 Oct;65(10):3501-6. doi: 10.1099/ijsem.0.000445. Epub 2015 Jul 14.


Crassaminicella profunda gen. nov., sp. nov., an anaerobic marine bacterium isolated from deep-sea sediments.

Lakhal R, Pradel N, Postec A, Ollivier B, Cayol JL, Godfroy A, Fardeau ML, Galés G.

Int J Syst Evol Microbiol. 2015 Sep;65(9):3097-102. doi: 10.1099/ijsem.0.000386. Epub 2015 Jun 25.


Biochemical characterization of a detergent-stable serine alkaline protease from Caldicoprobacter guelmensis.

Bouacem K, Bouanane-Darenfed A, Laribi-Habchi H, Elhoul MB, Hmida-Sayari A, Hacene H, Ollivier B, Fardeau ML, Jaouadi B, Bejar S.

Int J Biol Macromol. 2015 Nov;81:299-307. doi: 10.1016/j.ijbiomac.2015.08.011. Epub 2015 Aug 8.


Ecological significance of Synergistetes in the biological treatment of tuna cooking wastewater by an anaerobic sequencing batch reactor.

Militon C, Hamdi O, Michotey V, Fardeau ML, Ollivier B, Bouallagui H, Hamdi M, Bonin P.

Environ Sci Pollut Res Int. 2015 Nov;22(22):18230-8. doi: 10.1007/s11356-015-4973-x. Epub 2015 Jul 22.


Crystal structure of the effector AvrLm4-7 of Leptosphaeria maculans reveals insights into its translocation into plant cells and recognition by resistance proteins.

Blondeau K, Blaise F, Graille M, Kale SD, Linglin J, Ollivier B, Labarde A, Lazar N, Daverdin G, Balesdent MH, Choi DH, Tyler BM, Rouxel T, van Tilbeurgh H, Fudal I.

Plant J. 2015 Aug;83(4):610-24. doi: 10.1111/tpj.12913. Epub 2015 Jul 14.


Acetoanaerobium pronyense sp. nov., an anaerobic alkaliphilic bacterium isolated from a carbonate chimney of the Prony Hydrothermal Field (New Caledonia).

Bes M, Merrouch M, Joseph M, Quéméneur M, Payri C, Pelletier B, Ollivier B, Fardeau ML, Erauso G, Postec A.

Int J Syst Evol Microbiol. 2015 Aug;65(8):2574-80. doi: 10.1099/ijs.0.000307. Epub 2015 May 6.


Endolithic microbial communities in carbonate precipitates from serpentinite-hosted hyperalkaline springs of the Voltri Massif (Ligurian Alps, Northern Italy).

Quéméneur M, Palvadeau A, Postec A, Monnin C, Chavagnac V, Ollivier B, Erauso G.

Environ Sci Pollut Res Int. 2015 Sep;22(18):13613-24. doi: 10.1007/s11356-015-4113-7. Epub 2015 Jan 27.


Analysis of a population of magnetotactic bacteria of the Gulf of Gabès, Tunisia.

Pradel N, Cayol JL, Fardeau ML, Karray F, Sayadi S, Alazard D, Ollivier B.

Environ Sci Pollut Res Int. 2016 Mar;23(5):4046-53. doi: 10.1007/s11356-015-4314-0. Epub 2015 Mar 14.


Spatial distribution of microbial communities in the shallow submarine alkaline hydrothermal field of the Prony Bay, New Caledonia.

Quéméneur M, Bes M, Postec A, Mei N, Hamelin J, Monnin C, Chavagnac V, Payri C, Pelletier B, Guentas-Dombrowsky L, Gérard M, Pisapia C, Gérard E, Ménez B, Ollivier B, Erauso G.

Environ Microbiol Rep. 2014 Dec;6(6):665-74.


The APSES transcription factor LmStuA is required for sporulation, pathogenic development and effector gene expression in Leptosphaeria maculans.

Soyer JL, Hamiot A, Ollivier B, Balesdent MH, Rouxel T, Fudal I.

Mol Plant Pathol. 2015 Dec;16(9):1000-5. doi: 10.1111/mpp.12249. Epub 2015 Apr 15.


Characterization of Desulfovibrio biadhensis sp. nov., isolated from a thermal spring.

Fadhlaoui K, Ben Hania W, Postec A, Fauque G, Hamdi M, Ollivier B, Fardeau ML.

Int J Syst Evol Microbiol. 2015 Apr;65(Pt 4):1256-61. doi: 10.1099/ijs.0.000088. Epub 2015 Jan 29.


Diversity of magnetotactic bacteria from a French pristine Mediterranean area.

Fuduche M, Postec A, Davidson S, Chauvin JP, Galès G, Hirschler-Réa A, Ollivier B, Wu LF, Pradel N.

Curr Microbiol. 2015 Apr;70(4):499-505. doi: 10.1007/s00284-014-0745-y. Epub 2014 Dec 9.


Aminobacterium thunnarium sp. nov., a mesophilic, amino acid-degrading bacterium isolated from an anaerobic sludge digester, pertaining to the phylum Synergistetes.

Hamdi O, Ben Hania W, Postec A, Bouallagui H, Hamdi M, Bonin P, Ollivier B, Fardeau ML.

Int J Syst Evol Microbiol. 2015 Feb;65(Pt 2):609-14. doi: 10.1099/ijs.0.068965-0. Epub 2014 Nov 18.


Characterization of Alkaliphilus hydrothermalis sp. nov., a novel alkaliphilic anaerobic bacterium, isolated from a carbonaceous chimney of the Prony hydrothermal field, New Caledonia.

Ben Aissa F, Postec A, Erauso G, Payri C, Pelletier B, Hamdi M, Fardeau ML, Ollivier B.

Extremophiles. 2015 Jan;19(1):183-8. doi: 10.1007/s00792-014-0697-y. Epub 2014 Oct 16.


Transposable element-assisted evolution and adaptation to host plant within the Leptosphaeria maculans-Leptosphaeria biglobosa species complex of fungal pathogens.

Grandaubert J, Lowe RG, Soyer JL, Schoch CL, Van de Wouw AP, Fudal I, Robbertse B, Lapalu N, Links MG, Ollivier B, Linglin J, Barbe V, Mangenot S, Cruaud C, Borhan H, Howlett BJ, Balesdent MH, Rouxel T.

BMC Genomics. 2014 Oct 12;15:891. doi: 10.1186/1471-2164-15-891.


Fusibacter bizertensis sp. nov., isolated from a corroded kerosene storage tank.

Smii L, Ben Hania W, Cayol JL, Joseph M, Hamdi M, Ollivier B, Fardeau ML.

Int J Syst Evol Microbiol. 2015 Jan;65(Pt 1):117-21. doi: 10.1099/ijs.0.066183-0. Epub 2014 Oct 7.


Transcriptomics reveal several gene expression patterns in the piezophile Desulfovibrio hydrothermalis in response to hydrostatic pressure.

Amrani A, Bergon A, Holota H, Tamburini C, Garel M, Ollivier B, Imbert J, Dolla A, Pradel N.

PLoS One. 2014 Sep 12;9(9):e106831. doi: 10.1371/journal.pone.0106831. eCollection 2014.


Partial characterization of xylanase produced by Caldicoprobacter algeriensis, a new thermophilic anaerobic bacterium isolated from an Algerian hot spring.

Bouacem K, Bouanane-Darenfed A, Boucherba N, Joseph M, Gagaoua M, Ben Hania W, Kecha M, Benallaoua S, Hacène H, Ollivier B, Fardeau ML.

Appl Biochem Biotechnol. 2014 Nov;174(5):1969-81. doi: 10.1007/s12010-014-1153-2. Epub 2014 Aug 27.


Anaerobic oxidation of long-chain n-alkanes by the hyperthermophilic sulfate-reducing archaeon, Archaeoglobus fulgidus.

Khelifi N, Amin Ali O, Roche P, Grossi V, Brochier-Armanet C, Valette O, Ollivier B, Dolla A, Hirschler-Réa A.

ISME J. 2014 Nov;8(11):2153-66. doi: 10.1038/ismej.2014.58. Epub 2014 Apr 24.


Epigenetic control of effector gene expression in the plant pathogenic fungus Leptosphaeria maculans.

Soyer JL, El Ghalid M, Glaser N, Ollivier B, Linglin J, Grandaubert J, Balesdent MH, Connolly LR, Freitag M, Rouxel T, Fudal I.

PLoS Genet. 2014 Mar 6;10(3):e1004227. doi: 10.1371/journal.pgen.1004227. eCollection 2014 Mar.


Vallitalea pronyensis sp. nov., isolated from a marine alkaline hydrothermal chimney.

Ben Aissa F, Postec A, Erauso G, Payri C, Pelletier B, Hamdi M, Ollivier B, Fardeau ML.

Int J Syst Evol Microbiol. 2014 Apr;64(Pt 4):1160-5. doi: 10.1099/ijs.0.055756-0. Epub 2014 Jan 9.


Desulfotomaculum spp. and related gram-positive sulfate-reducing bacteria in deep subsurface environments.

Aüllo T, Ranchou-Peyruse A, Ollivier B, Magot M.

Front Microbiol. 2013 Dec 2;4:362. doi: 10.3389/fmicb.2013.00362. eCollection 2013. Review.


Glossina spp. gut bacterial flora and their putative role in fly-hosted trypanosome development.

Geiger A, Fardeau ML, Njiokou F, Ollivier B.

Front Cell Infect Microbiol. 2013 Jul 24;3:34. doi: 10.3389/fcimb.2013.00034. eCollection 2013. Review.

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