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Items: 1 to 50 of 116


Compressed sensing-enabled phase-sensitive swept-source optical coherence tomography.

Ling Y, Meiniel W, Singh-Moon R, Angelini E, Olivo-Marin JC, Hendon CP.

Opt Express. 2019 Jan 21;27(2):855-871. doi: 10.1364/OE.27.000855.


Stress-induced brain activation: buffering role of social behavior and neuronal nicotinic receptors.

Nosjean A, de Chaumont F, Olivo-Marin JC, Granon S.

Brain Struct Funct. 2018 Dec;223(9):4259-4274. doi: 10.1007/s00429-018-1745-7. Epub 2018 Sep 8.


Anisotropic organization of circumferential actomyosin characterizes hematopoietic stem cells emergence in the zebrafish.

Lancino M, Majello S, Herbert S, De Chaumont F, Tinevez JY, Olivo-Marin JC, Herbomel P, Schmidt A.

Elife. 2018 Aug 22;7. pii: e37355. doi: 10.7554/eLife.37355.


Morphodynamics of the Actin-Rich Cytoskeleton in Entamoeba histolytica.

Manich M, Hernandez-Cuevas N, Ospina-Villa JD, Syan S, Marchat LA, Olivo-Marin JC, Guillén N.

Front Cell Infect Microbiol. 2018 May 29;8:179. doi: 10.3389/fcimb.2018.00179. eCollection 2018.


Denoising of Microscopy Images: A Review of the State-of-the-Art, and a New Sparsity-Based Method.

Meiniel W, Olivo-Marin JC, Angelini ED.

IEEE Trans Image Process. 2018 Aug;27(8):3842-3856. doi: 10.1109/TIP.2018.2819821.


Mapping molecular assemblies with fluorescence microscopy and object-based spatial statistics.

Lagache T, Grassart A, Dallongeville S, Faklaris O, Sauvonnet N, Dufour A, Danglot L, Olivo-Marin JC.

Nat Commun. 2018 Feb 15;9(1):698. doi: 10.1038/s41467-018-03053-x.


Quantitative and Statistical Study of the Dynamics of Clathrin-Dependent and -Independent Endocytosis Reveal a Differential Role of EndophilinA2.

Bertot L, Grassart A, Lagache T, Nardi G, Basquin C, Olivo-Marin JC, Sauvonnet N.

Cell Rep. 2018 Feb 6;22(6):1574-1588. doi: 10.1016/j.celrep.2018.01.039.


Crosstalk between Entamoeba histolytica and the human intestinal tract during amoebiasis.

Labruyère E, Thibeaux R, Olivo-Marin JC, Guillén N.

Parasitology. 2017 Dec 7:1-10. doi: 10.1017/S0031182017002190. [Epub ahead of print]


An objective comparison of cell-tracking algorithms.

Ulman V, Maška M, Magnusson KEG, Ronneberger O, Haubold C, Harder N, Matula P, Matula P, Svoboda D, Radojevic M, Smal I, Rohr K, Jaldén J, Blau HM, Dzyubachyk O, Lelieveldt B, Xiao P, Li Y, Cho SY, Dufour AC, Olivo-Marin JC, Reyes-Aldasoro CC, Solis-Lemus JA, Bensch R, Brox T, Stegmaier J, Mikut R, Wolf S, Hamprecht FA, Esteves T, Quelhas P, Demirel Ö, Malmström L, Jug F, Tomancak P, Meijering E, Muñoz-Barrutia A, Kozubek M, Ortiz-de-Solorzano C.

Nat Methods. 2017 Dec;14(12):1141-1152. doi: 10.1038/nmeth.4473. Epub 2017 Oct 30.


Legionella pneumophila Modulates Mitochondrial Dynamics to Trigger Metabolic Repurposing of Infected Macrophages.

Escoll P, Song OR, Viana F, Steiner B, Lagache T, Olivo-Marin JC, Impens F, Brodin P, Hilbi H, Buchrieser C.

Cell Host Microbe. 2017 Sep 13;22(3):302-316.e7. doi: 10.1016/j.chom.2017.07.020. Epub 2017 Aug 31.


BioFlow: a non-invasive, image-based method to measure speed, pressure and forces inside living cells.

Boquet-Pujadas A, Lecomte T, Manich M, Thibeaux R, Labruyère E, Guillén N, Olivo-Marin JC, Dufour AC.

Sci Rep. 2017 Aug 23;7(1):9178. doi: 10.1038/s41598-017-09240-y.


Activation of human gonadotropin-releasing hormone receptor promotes down regulation of ARHGAP18 and regulates the cell invasion of MDA-MB-231 cells.

Aguilar-Rojas A, Maya-Núñez G, Huerta-Reyes M, Pérez-Solis MA, Silva-García R, Guillén N, Olivo-Marin JC.

Mol Cell Endocrinol. 2018 Jan 15;460:94-103. doi: 10.1016/j.mce.2017.07.009. Epub 2017 Jul 11.


Deciphering tissue morphodynamics using bioimage informatics.

Dufour AC, Jonker AH, Olivo-Marin JC.

Philos Trans R Soc Lond B Biol Sci. 2017 May 19;372(1720). pii: 20150512. doi: 10.1098/rstb.2015.0512. Review.


Imaging tissue-mimic with light sheet microscopy: A comparative guideline.

Andilla J, Jorand R, Olarte OE, Dufour AC, Cazales M, Montagner YL, Ceolato R, Riviere N, Olivo-Marin JC, Loza-Alvarez P, Lorenzo C.

Sci Rep. 2017 Mar 21;7:44939. doi: 10.1038/srep44939.


Computer-assisted topological analysis of renal allograft inflammation adds to risk evaluation at diagnosis of humoral rejection.

Sicard A, Meas-Yedid V, Rabeyrin M, Koenig A, Ducreux S, Dijoud F, Hervieu V, Badet L, Morelon E, Olivo-Marin JC, Dubois V, Thaunat O.

Kidney Int. 2017 Jul;92(1):214-226. doi: 10.1016/j.kint.2017.01.011. Epub 2017 Mar 18.


Amotl1 mediates sequestration of the Hippo effector Yap1 downstream of Fat4 to restrict heart growth.

Ragni CV, Diguet N, Le Garrec JF, Novotova M, Resende TP, Pop S, Charon N, Guillemot L, Kitasato L, Badouel C, Dufour A, Olivo-Marin JC, Trouvé A, McNeill H, Meilhac SM.

Nat Commun. 2017 Feb 27;8:14582. doi: 10.1038/ncomms14582.


Imagining the future of bioimage analysis.

Meijering E, Carpenter AE, Peng H, Hamprecht FA, Olivo-Marin JC.

Nat Biotechnol. 2016 Dec 7;34(12):1250-1255. doi: 10.1038/nbt.3722. No abstract available.


The motility of Entamoeba histolytica: finding ways to understand intestinal amoebiasis.

Aguilar-Rojas A, Olivo-Marin JC, Guillen N.

Curr Opin Microbiol. 2016 Dec;34:24-30. doi: 10.1016/j.mib.2016.07.016. Epub 2016 Aug 4. Review.


Tunneling nanotubes spread fibrillar α-synuclein by intercellular trafficking of lysosomes.

Abounit S, Bousset L, Loria F, Zhu S, de Chaumont F, Pieri L, Olivo-Marin JC, Melki R, Zurzolo C.

EMBO J. 2016 Oct 4;35(19):2120-2138. Epub 2016 Aug 22.


Recording Mouse Ultrasonic Vocalizations to Evaluate Social Communication.

Ferhat AT, Torquet N, Le Sourd AM, de Chaumont F, Olivo-Marin JC, Faure P, Bourgeron T, Ey E.

J Vis Exp. 2016 Jun 5;(112). doi: 10.3791/53871.


A role for septin 2 in Drp1-mediated mitochondrial fission.

Pagliuso A, Tham TN, Stevens JK, Lagache T, Persson R, Salles A, Olivo-Marin JC, Oddos S, Spang A, Cossart P, Stavru F.

EMBO Rep. 2016 Jun;17(6):858-73. doi: 10.15252/embr.201541612. Epub 2016 May 23.


Human Liver Infection in a Dish: Easy-To-Build 3D Liver Models for Studying Microbial Infection.

Petropolis DB, Faust DM, Tolle M, Rivière L, Valentin T, Neuveut C, Hernandez-Cuevas N, Dufour A, Olivo-Marin JC, Guillen N.

PLoS One. 2016 Feb 10;11(2):e0148667. doi: 10.1371/journal.pone.0148667. eCollection 2016.


Intracellular traffic of the lysine and glutamic acid rich protein KERP1 reveals features of endomembrane organization in Entamoeba histolytica.

Perdomo D, Manich M, Syan S, Olivo-Marin JC, Dufour AC, Guillén N.

Cell Microbiol. 2016 Aug;18(8):1134-52. doi: 10.1111/cmi.12576. Epub 2016 Feb 26.


Anxiety- and Depression-Like States Lead to Pronounced Olfactory Deficits and Impaired Adult Neurogenesis in Mice.

Siopi E, Denizet M, Gabellec MM, de Chaumont F, Olivo-Marin JC, Guilloux JP, Lledo PM, Lazarini F.

J Neurosci. 2016 Jan 13;36(2):518-31. doi: 10.1523/JNEUROSCI.2817-15.2016.


Amoeboid movement in protozoan pathogens.

Dufour AC, Olivo-Marin JC, Guillen N.

Semin Cell Dev Biol. 2015 Oct;46:128-34. doi: 10.1016/j.semcdb.2015.10.010. Epub 2015 Oct 13. Review.


Absence of Fungal Spore Internalization by Bronchial Epithelium in Mouse Models Evidenced by a New Bioimaging Approach and Transmission Electronic Microscopy.

Rammaert B, Jouvion G, de Chaumont F, Garcia-Hermoso D, Szczepaniak C, Renaudat C, Olivo-Marin JC, Chrétien F, Dromer F, Bretagne S.

Am J Pathol. 2015 Sep;185(9):2421-30. doi: 10.1016/j.ajpath.2015.04.027. Epub 2015 Jul 10.


Membrane protrusion powers clathrin-independent endocytosis of interleukin-2 receptor.

Basquin C, Trichet M, Vihinen H, Malardé V, Lagache T, Ripoll L, Jokitalo E, Olivo-Marin JC, Gautreau A, Sauvonnet N.

EMBO J. 2015 Aug 13;34(16):2147-61. doi: 10.15252/embj.201490788. Epub 2015 Jun 29.


Out-of-focus background subtraction for fast structured illumination super-resolution microscopy of optically thick samples.

Vermeulen P, Zhan H, Orieux F, Olivo-Marin JC, Lenkei Z, Loriette V, Fragola A.

J Microsc. 2015 Sep;259(3):257-68. doi: 10.1111/jmi.12259. Epub 2015 Apr 28.


Imaging intraflagellar transport in trypanosomes.

Santi-Rocca J, Chenouard N, Fort C, Lagache T, Olivo-Marin JC, Bastin P.

Methods Cell Biol. 2015;127:487-508. doi: 10.1016/bs.mcb.2015.01.005. Epub 2015 Mar 7.


Social communication in mice--are there optimal cage conditions?

Ferhat AT, Le Sourd AM, de Chaumont F, Olivo-Marin JC, Bourgeron T, Ey E.

PLoS One. 2015 Mar 25;10(3):e0121802. doi: 10.1371/journal.pone.0121802. eCollection 2015.


KDEL Receptors Assist Dengue Virus Exit from the Endoplasmic Reticulum.

Li MY, Grandadam M, Kwok K, Lagache T, Siu YL, Zhang JS, Sayteng K, Kudelko M, Qin CF, Olivo-Marin JC, Bruzzone R, Wang PG.

Cell Rep. 2015 Mar 3. pii: S2211-1247(15)00167-9. doi: 10.1016/j.celrep.2015.02.021. [Epub ahead of print]


Acute stress in adulthood impoverishes social choices and triggers aggressiveness in preclinical models.

Nosjean A, Cressant A, de Chaumont F, Olivo-Marin JC, Chauveau F, Granon S.

Front Behav Neurosci. 2015 Jan 6;8:447. doi: 10.3389/fnbeh.2014.00447. eCollection 2014.


Statistical analysis of molecule colocalization in bioimaging.

Lagache T, Sauvonnet N, Danglot L, Olivo-Marin JC.

Cytometry A. 2015 Jun;87(6):568-79. doi: 10.1002/cyto.a.22629. Epub 2015 Jan 20. Review.


An open data ecosystem for cell migration research.

Masuzzo P, Martens L; 2014 Cell Migration Workshop Participants, Ampe C, Anderson KI, Barry J, De Wever O, Debeir O, Decaestecker C, Dolznig H, Friedl P, Gaggioli C, Geiger B, Goldberg IG, Horn E, Horwitz R, Kam Z, Le Dévédec SE, Vignjevic DM, Moore J, Olivo-Marin JC, Sahai E, Sansone SA, Sanz-Moreno V, Strömblad S, Swedlow J, Textor J, Van Troys M, Zantl R.

Trends Cell Biol. 2015 Feb;25(2):55-8. doi: 10.1016/j.tcb.2014.11.005. Epub 2014 Dec 5.


Adult neurogenesis restores dopaminergic neuronal loss in the olfactory bulb.

Lazarini F, Gabellec MM, Moigneu C, de Chaumont F, Olivo-Marin JC, Lledo PM.

J Neurosci. 2014 Oct 22;34(43):14430-42. doi: 10.1523/JNEUROSCI.5366-13.2014.


An unbiased risk estimator for image denoising in the presence of mixed poisson-gaussian noise.

Le Montagner Y, Angelini ED, Olivo-Marin JC.

IEEE Trans Image Process. 2014 Mar;23(3):1255-68. doi: 10.1109/TIP.2014.2300821. Erratum in: IEEE Trans Image Process. 2014 Jun;23(6):2750.


Objective comparison of particle tracking methods.

Chenouard N, Smal I, de Chaumont F, Maška M, Sbalzarini IF, Gong Y, Cardinale J, Carthel C, Coraluppi S, Winter M, Cohen AR, Godinez WJ, Rohr K, Kalaidzidis Y, Liang L, Duncan J, Shen H, Xu Y, Magnusson KE, Jaldén J, Blau HM, Paul-Gilloteaux P, Roudot P, Kervrann C, Waharte F, Tinevez JY, Shorte SL, Willemse J, Celler K, van Wezel GP, Dan HW, Tsai YS, Ortiz de Solórzano C, Olivo-Marin JC, Meijering E.

Nat Methods. 2014 Mar;11(3):281-9. doi: 10.1038/nmeth.2808. Epub 2014 Jan 19.


Urinary retinol binding protein is a marker of the extent of interstitial kidney fibrosis.

Pallet N, Chauvet S, Chassé JF, Vincent M, Avillach P, Levi C, Meas-Yedid V, Olivo-Marin JC, Nga-Matsogo D, Beaune P, Thervet E, Karras A.

PLoS One. 2014 Jan 8;9(1):e84708. doi: 10.1371/journal.pone.0084708. eCollection 2014.


Analysis of the spatial organization of molecules with robust statistics.

Lagache T, Lang G, Sauvonnet N, Olivo-Marin JC.

PLoS One. 2013 Dec 4;8(12):e80914. doi: 10.1371/journal.pone.0080914. eCollection 2013.


Early sequence of events triggered by the interaction of Neisseria meningitidis with endothelial cells.

Soyer M, Charles-Orszag A, Lagache T, Machata S, Imhaus AF, Dumont A, Millien C, Olivo-Marin JC, Duménil G.

Cell Microbiol. 2014 Jun;16(6):878-95. doi: 10.1111/cmi.12248. Epub 2013 Dec 27.


αTAT1 catalyses microtubule acetylation at clathrin-coated pits.

Montagnac G, Meas-Yedid V, Irondelle M, Castro-Castro A, Franco M, Shida T, Nachury MV, Benmerah A, Olivo-Marin JC, Chavrier P.

Nature. 2013 Oct 24;502(7472):567-70. doi: 10.1038/nature12571. Epub 2013 Oct 6.


Multiple hypothesis tracking for cluttered biological image sequences.

Chenouard N, Bloch I, Olivo-Marin JC.

IEEE Trans Pattern Anal Mach Intell. 2013 Nov;35(11):2736-3750. doi: 10.1109/TPAMI.2013.97.


AutomiG, a biosensor to detect alterations in miRNA biogenesis and in small RNA silencing guided by perfect target complementarity.

Carré C, Jacquier C, Bougé AL, de Chaumont F, Besnard-Guerin C, Thomassin H, Pidoux J, Da Silva B, Chalatsi E, Zahra S, Olivo-Marin JC, Munier-Lehmann H, Antoniewski C.

PLoS One. 2013 Sep 3;8(9):e74296. doi: 10.1371/journal.pone.0074296. eCollection 2013.


Nonaggressive and adapted social cognition is controlled by the interplay between noradrenergic and nicotinic receptor mechanisms in the prefrontal cortex.

Coura RS, Cressant A, Xia J, de Chaumont F, Olivo-Marin JC, Pelloux Y, Dalley JW, Granon S.

FASEB J. 2013 Nov;27(11):4343-54. doi: 10.1096/fj.13-231084. Epub 2013 Jul 23.


ActA promotes Listeria monocytogenes aggregation, intestinal colonization and carriage.

Travier L, Guadagnini S, Gouin E, Dufour A, Chenal-Francisque V, Cossart P, Olivo-Marin JC, Ghigo JM, Disson O, Lecuit M.

PLoS Pathog. 2013 Jan;9(1):e1003131. doi: 10.1371/journal.ppat.1003131. Epub 2013 Jan 31.


The signalling factor PI3K is a specific regulator of the clathrin-independent dynamin-dependent endocytosis of IL-2 receptors.

Basquin C, Malardé V, Mellor P, Anderson DH, Meas-Yedid V, Olivo-Marin JC, Dautry-Varsat A, Sauvonnet N.

J Cell Sci. 2013 Mar 1;126(Pt 5):1099-108. doi: 10.1242/jcs.110932. Epub 2013 Jan 23.


Extracting 3D cell parameters from dense tissue environments: application to the development of the mouse heart.

Pop S, Dufour AC, Le Garrec JF, Ragni CV, Cimper C, Meilhac SM, Olivo-Marin JC.

Bioinformatics. 2013 Mar 15;29(6):772-9. doi: 10.1093/bioinformatics/btt027. Epub 2013 Jan 21.


Quantitative analysis of polarity in 3D reveals local cell coordination in the embryonic mouse heart.

Le Garrec JF, Ragni CV, Pop S, Dufour A, Olivo-Marin JC, Buckingham ME, Meilhac SM.

Development. 2013 Jan 15;140(2):395-404. doi: 10.1242/dev.087940.


Intraflagellar transport proteins cycle between the flagellum and its base.

Buisson J, Chenouard N, Lagache T, Blisnick T, Olivo-Marin JC, Bastin P.

J Cell Sci. 2013 Jan 1;126(Pt 1):327-38. doi: 10.1242/jcs.117069. Epub 2012 Sep 19.


Shigella effector IpaB-induced cholesterol relocation disrupts the Golgi complex and recycling network to inhibit host cell secretion.

Mounier J, Boncompain G, Senerovic L, Lagache T, Chrétien F, Perez F, Kolbe M, Olivo-Marin JC, Sansonetti PJ, Sauvonnet N.

Cell Host Microbe. 2012 Sep 13;12(3):381-9. doi: 10.1016/j.chom.2012.07.010.

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