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Items: 22


Morphological analysis of chiral rod clusters from a coarse-grained single-site chiral potential.

Sutherland BJ, Olesen SW, Kusumaatmaja H, Morgan JWR, Wales DJ.

Soft Matter. 2019 Oct 28;15(40):8147-8155. doi: 10.1039/c9sm01343a. Epub 2019 Oct 7.


Levels of outpatient prescribing for four major antibiotic classes and rates of septicemia hospitalization in adults in different US states - a statistical analysis.

Goldstein E, Olesen SW, Karaca Z, Steiner CA, Viboud C, Lipsitch M.

BMC Public Health. 2019 Aug 19;19(1):1138. doi: 10.1186/s12889-019-7431-8.


Cumulative Probability of Receiving an Antibiotic Prescription over Time.

Olesen SW, MacFadden D, Grad YH.

N Engl J Med. 2019 May 9;380(19):1872-1873. doi: 10.1056/NEJMc1816699. No abstract available.


Outpatient Antibiotic Prescribing in Massachusetts, 2011-2015.

Klevens RM, Caten E, Olesen SW, DeMaria A, Troppy S, Grad YH.

Open Forum Infect Dis. 2019 Apr 8;6(5):ofz169. doi: 10.1093/ofid/ofz169. eCollection 2019 May.


Response to comment on 'The distribution of antibiotic use and its association with antibiotic resistance'.

Olesen SW, Lipsitch M, Grad YH.

Elife. 2019 May 3;8. pii: e47124. doi: 10.7554/eLife.47124.


Deciphering the impact of bystander selection for antibiotic resistance in Neisseria gonorrhoeae.

Olesen SW, Grad YH.

J Infect Dis. 2019 Apr 8. pii: jiz156. doi: 10.1093/infdis/jiz156. [Epub ahead of print] No abstract available.


The distribution of antibiotic use and its association with antibiotic resistance.

Olesen SW, Barnett ML, MacFadden DR, Brownstein JS, Hernández-Díaz S, Lipsitch M, Grad YH.

Elife. 2018 Dec 18;7. pii: e39435. doi: 10.7554/eLife.39435.


Estimating the proportion of bystander selection for antibiotic resistance among potentially pathogenic bacterial flora.

Tedijanto C, Olesen SW, Grad YH, Lipsitch M.

Proc Natl Acad Sci U S A. 2018 Dec 18;115(51):E11988-E11995. doi: 10.1073/pnas.1810840115.


Racial/Ethnic Disparities in Antimicrobial Drug Use, United States, 2014-2015.

Olesen SW, Grad YH.

Emerg Infect Dis. 2018 Nov;24(11):2126-2128. doi: 10.3201/eid2411.180762.


Azithromycin Susceptibility Among Neisseria gonorrhoeae Isolates and Seasonal Macrolide Use.

Olesen SW, Torrone EA, Papp JR, Kirkcaldy RD, Lipsitch M, Grad YH.

J Infect Dis. 2019 Jan 29;219(4):619-623. doi: 10.1093/infdis/jiy551.


Dynamics of microbial populations mediating biogeochemical cycling in a freshwater lake.

Arora-Williams K, Olesen SW, Scandella BP, Delwiche K, Spencer SJ, Myers EM, Abraham S, Sooklal A, Preheim SP.

Microbiome. 2018 Sep 18;6(1):165. doi: 10.1186/s40168-018-0556-7.


Trends in outpatient antibiotic use and prescribing practice among US older adults, 2011-15: observational study.

Olesen SW, Barnett ML, MacFadden DR, Lipsitch M, Grad YH.

BMJ. 2018 Jul 27;362:k3155. doi: 10.1136/bmj.k3155.


Multidrug-resistant Neisseria gonorrhoeae: implications for future treatment strategies.

MacFadden DR, Lipsitch M, Olesen SW, Grad Y.

Lancet Infect Dis. 2018 Jun;18(6):599. doi: 10.1016/S1473-3099(18)30274-3. No abstract available.


Searching for superstool: maximizing the therapeutic potential of FMT.

Olesen SW, Leier MM, Alm EJ, Kahn SA.

Nat Rev Gastroenterol Hepatol. 2018 Jul;15(7):387-388. doi: 10.1038/s41575-018-0019-4. No abstract available.


Salt-responsive gut commensal modulates TH17 axis and disease.

Wilck N, Matus MG, Kearney SM, Olesen SW, Forslund K, Bartolomaeus H, Haase S, Mähler A, Balogh A, Markó L, Vvedenskaya O, Kleiner FH, Tsvetkov D, Klug L, Costea PI, Sunagawa S, Maier L, Rakova N, Schatz V, Neubert P, Frätzer C, Krannich A, Gollasch M, Grohme DA, Côrte-Real BF, Gerlach RG, Basic M, Typas A, Wu C, Titze JM, Jantsch J, Boschmann M, Dechend R, Kleinewietfeld M, Kempa S, Bork P, Linker RA, Alm EJ, Müller DN.

Nature. 2017 Nov 30;551(7682):585-589. doi: 10.1038/nature24628. Epub 2017 Nov 15.


dbOTU3: A new implementation of distribution-based OTU calling.

Olesen SW, Duvallet C, Alm EJ.

PLoS One. 2017 May 4;12(5):e0176335. doi: 10.1371/journal.pone.0176335. eCollection 2017.


Designing fecal microbiota transplant trials that account for differences in donor stool efficacy.

Olesen SW, Gurry T, Alm EJ.

Stat Methods Med Res. 2018 Oct;27(10):2906-2917. doi: 10.1177/0962280216688502. Epub 2017 Feb 9.


Dysbiosis is not an answer.

Olesen SW, Alm EJ.

Nat Microbiol. 2016 Nov 25;1:16228. doi: 10.1038/nmicrobiol.2016.228. No abstract available.


Surveys, simulation and single-cell assays relate function and phylogeny in a lake ecosystem.

Preheim SP, Olesen SW, Spencer SJ, Materna A, Varadharajan C, Blackburn M, Friedman J, Rodríguez J, Hemond H, Alm EJ.

Nat Microbiol. 2016 Aug 15;1(9):16130. doi: 10.1038/nmicrobiol.2016.130.


A Novel Analysis Method for Paired-Sample Microbial Ecology Experiments.

Olesen SW, Vora S, Techtmann SM, Fortney JL, Bastidas-Oyanedel JR, Rodríguez J, Hazen TC, Alm EJ.

PLoS One. 2016 May 6;11(5):e0154804. doi: 10.1371/journal.pone.0154804. eCollection 2016.


Natural bacterial communities serve as quantitative geochemical biosensors.

Smith MB, Rocha AM, Smillie CS, Olesen SW, Paradis C, Wu L, Campbell JH, Fortney JL, Mehlhorn TL, Lowe KA, Earles JE, Phillips J, Techtmann SM, Joyner DC, Elias DA, Bailey KL, Hurt RA Jr, Preheim SP, Sanders MC, Yang J, Mueller MA, Brooks S, Watson DB, Zhang P, He Z, Dubinsky EA, Adams PD, Arkin AP, Fields MW, Zhou J, Alm EJ, Hazen TC.

mBio. 2015 May 12;6(3):e00326-15. doi: 10.1128/mBio.00326-15.


Single molecules reveal the dynamics of heterogeneities in a polymer at the glass transition.

Bingemann D, Allen RM, Olesen SW.

J Chem Phys. 2011 Jan 14;134(2):024513. doi: 10.1063/1.3516516.


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