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Items: 1 to 50 of 1106

1.

Toward an impact assessment of ozone on plant carbon fixation using a process-based plant growth model: A case study of Fagus crenata grown under different soil nutrient levels.

Kinose Y, Fukamachi Y, Okabe S, Hiroshima H, Watanabe M, Izuta T.

Sci Total Environ. 2020 Jan 31;716:137008. doi: 10.1016/j.scitotenv.2020.137008. [Epub ahead of print]

PMID:
32059294
2.

Microscopy in 2019 with a renewed editorial board.

Okabe S.

Microscopy (Oxf). 2019 Feb 1;68(1):1-2. doi: 10.1093/jmicro/dfz005. No abstract available.

PMID:
32052839
3.

USVSEG: A robust method for segmentation of ultrasonic vocalizations in rodents.

Tachibana RO, Kanno K, Okabe S, Kobayasi KI, Okanoya K.

PLoS One. 2020 Feb 10;15(2):e0228907. doi: 10.1371/journal.pone.0228907. eCollection 2020.

4.

Simple and reliable enumeration of Escherichia coli concentrations in wastewater samples by measuring β-d-glucuronidase (GUS) activities via a microplate reader.

Satoh H, Kikuchi K, Katayose Y, Tsuda S, Hirano R, Hirakata Y, Kitajima M, Ishii S, Oshiki M, Hatamoto M, Takahashi M, Okabe S.

Sci Total Environ. 2020 Jan 25;715:136928. doi: 10.1016/j.scitotenv.2020.136928. [Epub ahead of print]

PMID:
32007893
5.

Impaired actin dynamics and suppression of Shank2-mediated spine enlargement in cortactin knockout mice.

Tanaka S, Masuda Y, Harada A, Okabe S.

Microscopy (Oxf). 2020 Jan 28. pii: dfaa001. doi: 10.1093/jmicro/dfaa001. [Epub ahead of print]

PMID:
31990031
6.

Presentation of familiar odor induces negative dream emotions during rapid eye movement (REM) sleep in healthy adolescents.

Okabe S, Hayashi M, Abe T, Fukuda K.

Sleep Med. 2019 Dec 17;66:227-232. doi: 10.1016/j.sleep.2019.11.1260. [Epub ahead of print]

PMID:
31978867
7.

Aplasia Cutis Congenita in an Infant with Very Low Birth Weight.

Kawaguchi N, Kuboi T, Yamato S, Okabe S, Nii K, Sadamura T, Nakano A, Morine M, Taniguchi H.

J Pediatr. 2020 Jan 10. pii: S0022-3476(19)31608-7. doi: 10.1016/j.jpeds.2019.11.027. [Epub ahead of print] No abstract available.

PMID:
31932018
8.

Required Chlorination Doses to Fulfill the Credit Value for Disinfection of Enteric Viruses in Water: A Critical Review.

Rachmadi AT, Kitajima M, Kato T, Kato H, Okabe S, Sano D.

Environ Sci Technol. 2020 Feb 18;54(4):2068-2077. doi: 10.1021/acs.est.9b01685. Epub 2020 Feb 3.

PMID:
31927958
9.

Ecological niche differentiation among anammox bacteria.

Zhang L, Okabe S.

Water Res. 2020 Mar 15;171:115468. doi: 10.1016/j.watres.2020.115468. Epub 2020 Jan 3. Review.

PMID:
31926373
10.

Effect of dual inhibition of histone deacetylase and phosphatidylinositol-3 kinase in Philadelphia chromosome-positive leukemia cells.

Okabe S, Tanaka Y, Moriyama M, Gotoh A.

Cancer Chemother Pharmacol. 2020 Feb;85(2):401-412. doi: 10.1007/s00280-019-04022-x. Epub 2020 Jan 4.

PMID:
31901955
11.

Mixture toxicity of the combinations of silver nanoparticles and environmental pollutants.

Fukushima T, Jintana W, Okabe S.

Environ Sci Pollut Res Int. 2019 Dec 21. doi: 10.1007/s11356-019-07413-y. [Epub ahead of print]

PMID:
31865577
12.
13.

Transcriptomic analysis of HepG2 cells exposed to fractionated wastewater effluents suggested humic substances as potential inducer of whole effluent toxicity.

Hara-Yamamura H, Fukushima T, Tan LC, Okabe S.

Chemosphere. 2020 Feb;240:124894. doi: 10.1016/j.chemosphere.2019.124894. Epub 2019 Sep 21.

PMID:
31726595
14.

Fecal Source Tracking in A Wastewater Treatment and Reclamation System Using Multiple Waterborne Gastroenteritis Viruses.

Ji Z, Wang XC, Xu L, Zhang C, Rong C, Rachmadi AT, Amarasiri M, Okabe S, Funamizu N, Sano D.

Pathogens. 2019 Sep 30;8(4). pii: E170. doi: 10.3390/pathogens8040170.

15.

Temporal Sequences of Synapse Disintegration Triggered by Afferent Axon Transection, Time-Lapse Imaging Study of Presynaptic and Postsynaptic Molecules.

Cho T, Kashiwagi Y, Okabe S.

eNeuro. 2019 Oct 4;6(5). pii: ENEURO.0459-18.2019. doi: 10.1523/ENEURO.0459-18.2019. Print 2019 Sep/Oct.

16.

Efficacy of dasatinib against ponatinib-resistant chronic myeloid leukemia cells.

Okabe S, Tanaka Y, Moriyama M, Gotoh A.

Leuk Lymphoma. 2020 Jan;61(1):237-239. doi: 10.1080/10428194.2019.1660971. Epub 2019 Sep 10. No abstract available.

PMID:
31502898
17.

Neonatal social isolation increases the proportion of the immature spines in the layer 2/3 pyramidal neurons of the somatosensory cortex.

Iguchi R, Tanaka S, Okabe S.

Neurosci Res. 2019 Jun 18. pii: S0168-0102(19)30046-X. doi: 10.1016/j.neures.2019.05.004. [Epub ahead of print]

PMID:
31226269
18.

Pepper yellow leaf curl Aceh virus: a novel bipartite begomovirus isolated from chili pepper, tomato, and tobacco plants in Indonesia.

Kesumawati E, Okabe S, Homma K, Fujiwara I, Zakaria S, Kanzaki S, Koeda S.

Arch Virol. 2019 Sep;164(9):2379-2383. doi: 10.1007/s00705-019-04316-8. Epub 2019 Jun 15.

PMID:
31203434
19.

Sequential therapy with sorafenib and regorafenib for advanced hepatocellular carcinoma: a multicenter retrospective study in Japan.

Ogasawara S, Ooka Y, Itokawa N, Inoue M, Okabe S, Seki A, Haga Y, Obu M, Atsukawa M, Itobayashi E, Mizumoto H, Sugiura N, Azemoto R, Kanayama K, Kanzaki H, Maruta S, Maeda T, Kusakabe Y, Yokoyama M, Kobayashi K, Kiyono S, Nakamura M, Saito T, Suzuki E, Nakamoto S, Yasui S, Tawada A, Chiba T, Arai M, Kanda T, Maruyama H, Kato N.

Invest New Drugs. 2020 Feb;38(1):172-180. doi: 10.1007/s10637-019-00801-8. Epub 2019 Jun 6.

PMID:
31172442
20.

Complete Genome Sequence of a Novel Myoviridae Phage, SfΦ01, Infecting Shigella spp.

Kitajima M, Ishii S, Takagi T, Okabe S.

Microbiol Resour Announc. 2019 Jun 6;8(23). pii: e00349-19. doi: 10.1128/MRA.00349-19.

21.

Medication nonadherence after kidney transplantation: an internet-based survey in Japan.

Kobayashi S, Tsutsui J, Okabe S, Hideki I, Akaho R, Nishimura K.

Psychol Health Med. 2020 Jan;25(1):91-101. doi: 10.1080/13548506.2019.1622745. Epub 2019 May 30.

PMID:
31144516
22.

Dual nitrogen and oxygen isotope fractionation during anaerobic ammonium oxidation by anammox bacteria.

Kobayashi K, Makabe A, Yano M, Oshiki M, Kindaichi T, Casciotti KL, Okabe S.

ISME J. 2019 Oct;13(10):2426-2436. doi: 10.1038/s41396-019-0440-x. Epub 2019 May 28.

PMID:
31138875
23.

Sign-constrained linear regression for prediction of microbe concentration based on water quality datasets.

Kato T, Kobayashi A, Oishi W, Kadoya SS, Okabe S, Ohta N, Amarasiri M, Sano D.

J Water Health. 2019 Jun;17(3):404-415. doi: 10.2166/wh.2019.001.

PMID:
31095516
24.

Precise Temporal Regulation of Molecular Diffusion within Dendritic Spines by Actin Polymers during Structural Plasticity.

Obashi K, Matsuda A, Inoue Y, Okabe S.

Cell Rep. 2019 Apr 30;27(5):1503-1515.e8. doi: 10.1016/j.celrep.2019.04.006.

25.

Tumor suppressor protein CYLD regulates morphogenesis of dendrites and spines.

Li J, Sekine-Aizawa Y, Ebrahimi S, Tanaka S, Okabe S.

Eur J Neurosci. 2019 Aug;50(4):2722-2739. doi: 10.1111/ejn.14421. Epub 2019 May 14.

PMID:
31001844
26.

Computational geometry analysis of dendritic spines by structured illumination microscopy.

Kashiwagi Y, Higashi T, Obashi K, Sato Y, Komiyama NH, Grant SGN, Okabe S.

Nat Commun. 2019 Mar 20;10(1):1285. doi: 10.1038/s41467-019-09337-0.

27.

LAMP5 in presynaptic inhibitory terminals in the hindbrain and spinal cord: a role in startle response and auditory processing.

Koebis M, Urata S, Shinoda Y, Okabe S, Yamasoba T, Nakao K, Aiba A, Furuichi T.

Mol Brain. 2019 Mar 12;12(1):20. doi: 10.1186/s13041-019-0437-4.

28.

Specific interactions of rotavirus HAL1166 with Enterobacter cloacae SENG-6 and their contribution on rotavirus HAL1166 removal.

Amarasiri M, Kawai H, Kitajima M, Okabe S, Sano D.

Water Sci Technol. 2019 Jan;79(2):342-348. doi: 10.2166/wst.2019.050.

PMID:
30865605
29.

Development of a simple analytical method to determine arsenite using a DNA aptamer and gold nanoparticles.

Matsunaga K, Okuyama Y, Hirano R, Okabe S, Takahashi M, Satoh H.

Chemosphere. 2019 Jun;224:538-543. doi: 10.1016/j.chemosphere.2019.02.182. Epub 2019 Feb 27.

PMID:
30836249
30.

Comparative Principles for Next-Generation Neuroscience.

Miller CT, Hale ME, Okano H, Okabe S, Mitra P.

Front Behav Neurosci. 2019 Feb 5;13:12. doi: 10.3389/fnbeh.2019.00012. eCollection 2019.

31.

Neuroethical Issues of the Brain/MINDS Project of Japan.

Sadato N, Morita K, Kasai K, Fukushi T, Nakamura K, Nakazawa E, Okano H, Okabe S.

Neuron. 2019 Feb 6;101(3):385-389. doi: 10.1016/j.neuron.2019.01.006.

32.

Ultrastructural Observation of Glutamatergic Synapses by Focused Ion Beam Scanning Electron Microscopy (FIB/SEM).

Takahashi-Nakazato A, Parajuli LK, Iwasaki H, Tanaka S, Okabe S.

Methods Mol Biol. 2019;1941:17-27. doi: 10.1007/978-1-4939-9077-1_2.

PMID:
30707424
33.

Membrane Fouling Potentials of an Exoelectrogenic Fouling-Causing Bacterium Cultured With Different External Electron Acceptors.

Ishizaki S, Papry RI, Miyake H, Narita Y, Okabe S.

Front Microbiol. 2019 Jan 14;9:3284. doi: 10.3389/fmicb.2018.03284. eCollection 2018.

34.

Cellular cartography of the organ of Corti based on optical tissue clearing and machine learning.

Urata S, Iida T, Yamamoto M, Mizushima Y, Fujimoto C, Matsumoto Y, Yamasoba T, Okabe S.

Elife. 2019 Jan 18;8. pii: e40946. doi: 10.7554/eLife.40946.

35.

Spatial impact of microglial distribution on dynamics of dendritic spines.

Iida T, Tanaka S, Okabe S.

Eur J Neurosci. 2019 Jun;49(11):1400-1417. doi: 10.1111/ejn.14325. Epub 2019 Jan 16.

PMID:
30585660
36.

Comparative Study on Variation of Quality of Life of Patients of Preemptive Kidney Transplantation and Nonpreemptive Kidney Transplantation.

Matsumura S, Unagami K, Okabe S, Fukuda H, Suzuki A, Fuchinoue S, Tanabe K, Ishida H.

Transplant Proc. 2018 Dec;50(10):3321-3328. doi: 10.1016/j.transproceed.2018.08.024. Epub 2018 Sep 7.

PMID:
30577202
37.

BIM deletion polymorphism accounts for lack of favorable outcome in Japanese females with follicular lymphoma.

Ito Y, Umezu T, Tadokoro K, Saito Y, Katagiri S, Suguro T, Asano M, Yoshizawa S, Akahane D, Tanaka Y, Fujimoto H, Okabe S, Gotoh M, Tauchi T, Kawana C, Ohyashiki JH, Nakamura N, Ohyashiki K.

Leuk Lymphoma. 2019 May;60(5):1283-1288. doi: 10.1080/10428194.2018.1529310. Epub 2018 Nov 27.

PMID:
30480474
38.

Copanlisib, a novel phosphoinositide 3-kinase inhibitor, combined with carfilzomib inhibits multiple myeloma cell proliferation.

Okabe S, Tanaka Y, Tauchi T, Ohyashiki K.

Ann Hematol. 2019 Mar;98(3):723-733. doi: 10.1007/s00277-018-3547-7. Epub 2018 Nov 15.

PMID:
30430191
39.

Depressive Symptoms and Associated Factors in Female Students in Fukushima Four Years after the Fukushima Nuclear Power Plant Disaster.

Ito S, Sasaki M, Okabe S, Konno N, Goto A.

Int J Environ Res Public Health. 2018 Oct 30;15(11). pii: E2411. doi: 10.3390/ijerph15112411.

40.
41.

High-Throughput flaA Short Variable Region Sequencing to Assess Campylobacter Diversity in Fecal Samples From Birds.

Zhang Q, Al-Ghalith GA, Kobayashi M, Segawa T, Maeda M, Okabe S, Knights D, Ishii S.

Front Microbiol. 2018 Sep 25;9:2201. doi: 10.3389/fmicb.2018.02201. eCollection 2018.

42.

Red-Shifted Fluorogenic Substrate for Detection of lacZ-Positive Cells in Living Tissue with Single-Cell Resolution.

Ito H, Kawamata Y, Kamiya M, Tsuda-Sakurai K, Tanaka S, Ueno T, Komatsu T, Hanaoka K, Okabe S, Miura M, Urano Y.

Angew Chem Int Ed Engl. 2018 Nov 26;57(48):15702-15706. doi: 10.1002/anie.201808670. Epub 2018 Nov 2.

PMID:
30255610
43.

Mesophyll conductance to CO2 in leaves of Siebold's beech (Fagus crenata) seedlings under elevated ozone.

Watanabe M, Kamimaki Y, Mori M, Okabe S, Arakawa I, Kinose Y, Nakaba S, Izuta T.

J Plant Res. 2018 Nov;131(6):907-914. doi: 10.1007/s10265-018-1063-4. Epub 2018 Sep 10.

PMID:
30203164
44.

Therapeutic targeting of Aurora A kinase in Philadelphia chromosome-positive ABL tyrosine kinase inhibitor-resistant cells.

Okabe S, Tauchi T, Tanaka Y, Ohyashiki K.

Oncotarget. 2018 Aug 21;9(65):32496-32506. doi: 10.18632/oncotarget.25985. eCollection 2018 Aug 21.

45.

Development of G-quadruplex ligands for selective induction of a parallel-type topology.

Ma Y, Tsushima Y, Sakuma M, Sasaki S, Iida K, Okabe S, Seimiya H, Hirokawa T, Nagasawa K.

Org Biomol Chem. 2018 Oct 17;16(40):7375-7382. doi: 10.1039/c8ob01702f.

PMID:
30187070
46.

Inflammasome-derived cytokine IL18 suppresses amyloid-induced seizures in Alzheimer-prone mice.

Tzeng TC, Hasegawa Y, Iguchi R, Cheung A, Caffrey DR, Thatcher EJ, Mao W, Germain G, Tamburro ND, Okabe S, Heneka MT, Latz E, Futai K, Golenbock DT.

Proc Natl Acad Sci U S A. 2018 Sep 4;115(36):9002-9007. doi: 10.1073/pnas.1801802115. Epub 2018 Aug 20.

47.

[Easy screening of outpatients for atrial fibrillation by analyzing fingertip pulse wave variation].

Okabe S, Sato A, Kasuya H, Sugiyama K, Endo S, Mitsunari H, Kamata K, Yamagata M, Katayanagi T.

Nihon Ronen Igakkai Zasshi. 2018;55(3):402-410. doi: 10.3143/geriatrics.55.402. Japanese.

48.

Collaborative Study for Analysis of Subvisible Particles Using Flow Imaging and Light Obscuration: Experiences in Japanese Biopharmaceutical Consortium.

Kiyoshi M, Shibata H, Harazono A, Torisu T, Maruno T, Akimaru M, Asano Y, Hirokawa M, Ikemoto K, Itakura Y, Iwura T, Kikitsu A, Kumagai T, Mori N, Murase H, Nishimura H, Oda A, Ogawa T, Ojima T, Okabe S, Saito S, Saitoh S, Suetomo H, Takegami K, Takeuchi M, Yasukawa H, Uchiyama S, Ishii-Watabe A.

J Pharm Sci. 2019 Feb;108(2):832-841. doi: 10.1016/j.xphs.2018.08.006. Epub 2018 Aug 16.

49.

Acetic acid is an oxidative stressor in gastric cancer cells.

Terasaki M, Ito H, Kurokawa H, Tamura M, Okabe S, Matsui H, Hyodo I.

J Clin Biochem Nutr. 2018 Jul;63(1):36-41. doi: 10.3164/jcbn.17-49. Epub 2018 Apr 3.

50.

New-Onset Anorexia Nervosa After Living Kidney Transplantation.

Kobayashi S, Kai K, Okabe S, Tsutsui J, Tsutsumi T, Fuchinoue S, Nishimura K.

Psychosomatics. 2019 Mar - Apr;60(2):216-220. doi: 10.1016/j.psym.2018.05.013. Epub 2018 Jun 4. No abstract available.

PMID:
30086994

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