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Items: 1 to 50 of 148

1.

Complete Genome Sequence of Thalassococcus sp. Strain S3, a Marine Roseobacter Clade Member Capable of Degrading Carbazole.

Vejarano F, Suzuki-Minakuchi C, Ohtsubo Y, Tsuda M, Okada K, Nojiri H.

Microbiol Resour Announc. 2019 Jul 11;8(28). pii: e00231-19. doi: 10.1128/MRA.00231-19.

2.

Non-trivial surface states of samarium hexaboride at the (111) surface.

Ohtsubo Y, Yamashita Y, Hagiwara K, Ideta SI, Tanaka K, Yukawa R, Horiba K, Kumigashira H, Miyamoto K, Okuda T, Hirano W, Iga F, Kimura SI.

Nat Commun. 2019 May 24;10(1):2298. doi: 10.1038/s41467-019-10353-3.

3.

Lessons from the genomes of lindane-degrading sphingomonads.

Nagata Y, Kato H, Ohtsubo Y, Tsuda M.

Environ Microbiol Rep. 2019 May 7. doi: 10.1111/1758-2229.12762. [Epub ahead of print] Review.

PMID:
31063253
4.

Suppression of substrate inhibition in phenanthrene-degrading Mycobacterium by co-cultivation with a non-degrading Burkholderia strain.

Ogawa N, Kato H, Kishida K, Ichihashi E, Ishige T, Yoshikawa H, Nagata Y, Ohtsubo Y, Tsuda M.

Microbiology. 2019 Jun;165(6):625-637. doi: 10.1099/mic.0.000801. Epub 2019 Apr 17.

PMID:
30994434
5.

Complete Genome Sequence of an Anaerobic Benzene-Degrading Bacterium, Azoarcus sp. Strain DN11.

Devanadera A, Vejarano F, Zhai Y, Suzuki-Minakuchi C, Ohtsubo Y, Tsuda M, Kasai Y, Takahata Y, Okada K, Nojiri H.

Microbiol Resour Announc. 2019 Mar 14;8(11). pii: e01699-18. doi: 10.1128/MRA.01699-18.

6.

Complete Genome Sequence of Bacillus licheniformis TAB7, a Compost-Deodorizing Strain with Potential for Plant Growth Promotion.

Mpofu E, Vejarano F, Suzuki-Minakuchi C, Ohtsubo Y, Tsuda M, Chakraborty J, Nakajima M, Okada K, Tada N, Kimura T, Nojiri H.

Microbiol Resour Announc. 2019 Jan 24;8(4). pii: e01659-18. doi: 10.1128/MRA.01659-18. eCollection 2019 Jan.

7.

Social dominance orientation as an obstacle to intergroup apology.

Mifune N, Inamasu K, Kohama S, Ohtsubo Y, Tago A.

PLoS One. 2019 Jan 25;14(1):e0211379. doi: 10.1371/journal.pone.0211379. eCollection 2019.

8.

Culture and cannabinoid receptor gene polymorphism interact to influence the perception of happiness.

Matsunaga M, Masuda T, Ishii K, Ohtsubo Y, Noguchi Y, Ochi M, Yamasue H.

PLoS One. 2018 Dec 21;13(12):e0209552. doi: 10.1371/journal.pone.0209552. eCollection 2018.

9.

Complete Genome Sequence of the Marine Carbazole-Degrading Bacterium Erythrobacter sp. Strain KY5.

Vejarano F, Suzuki-Minakuchi C, Ohtsubo Y, Tsuda M, Okada K, Nojiri H.

Microbiol Resour Announc. 2018 Aug 30;7(8). pii: e00935-18. doi: 10.1128/MRA.00935-18. eCollection 2018 Aug.

10.

Optimization of single strand DNA incorporation reaction by Moloney murine leukaemia virus reverse transcriptase.

Ohtsubo Y, Sasaki H, Nagata Y, Tsuda M.

DNA Res. 2018 Oct 1;25(5):477-487. doi: 10.1093/dnares/dsy018.

11.

Infrared Evaluation of Enantiometric Amount and Application to Racemization at the Interface Between L- and D-Alanine.

Kamei S, Hibi J, Ohtsubo Y, Watanabe H, Kimura SI.

Appl Spectrosc. 2018 Jul;72(7):1074-1079. doi: 10.1177/0003702818770575. Epub 2018 Apr 20.

PMID:
29676603
12.

Establishment of plasmid vector and allelic exchange mutagenesis systems in a mycobacterial strain that is able to degrade polycyclic aromatic hydrocarbon.

Kishida K, Ogawa N, Ichihashi E, Kato H, Nagata Y, Ohtsubo Y, Tsuda M.

Biosci Biotechnol Biochem. 2018 Jul;82(7):1169-1171. doi: 10.1080/09168451.2018.1445522. Epub 2018 Mar 9.

PMID:
29521166
13.

Neural and Genetic Correlates of the Social Sharing of Happiness.

Matsunaga M, Kawamichi H, Umemura T, Hori R, Shibata E, Kobayashi F, Suzuki K, Ishii K, Ohtsubo Y, Noguchi Y, Ochi M, Yamasue H, Ohira H.

Front Neurosci. 2017 Dec 19;11:718. doi: 10.3389/fnins.2017.00718. eCollection 2017.

14.

Surface electronic states of Au-induced nanowires on Ge(0 0 1).

Yaji K, Yukawa R, Kim S, Ohtsubo Y, Le Fèvre P, Bertran F, Taleb-Ibrahimi A, Matsuda I, Nakatsuji K, Shin S, Komori F.

J Phys Condens Matter. 2018 Feb 21;30(7):075001. doi: 10.1088/1361-648X/aaa526.

PMID:
29300177
15.

Providing compensation promotes forgiveness for replaceable, but not irreplaceable, losses.

Komiya A, Ohtsubo Y, Oishi S, Mifune N.

J Soc Psychol. 2018;158(6):680-693. doi: 10.1080/00224545.2017.1395792. Epub 2017 Nov 27.

PMID:
29083269
16.

Perceived Shared Condemnation Intensifies Punitive Moral Emotions.

Konishi N, Oe T, Shimizu H, Tanaka K, Ohtsubo Y.

Sci Rep. 2017 Aug 4;7(1):7289. doi: 10.1038/s41598-017-07916-z.

17.

Compounds that enhance the tailing activity of Moloney murine leukemia virus reverse transcriptase.

Ohtsubo Y, Nagata Y, Tsuda M.

Sci Rep. 2017 Jul 26;7(1):6520. doi: 10.1038/s41598-017-04765-8.

18.

Association between salivary serotonin and the social sharing of happiness.

Matsunaga M, Ishii K, Ohtsubo Y, Noguchi Y, Ochi M, Yamasue H.

PLoS One. 2017 Jul 6;12(7):e0180391. doi: 10.1371/journal.pone.0180391. eCollection 2017.

19.

The Small Protein HemP Is a Transcriptional Activator for the Hemin Uptake Operon in Burkholderia multivorans ATCC 17616.

Sato T, Nonoyama S, Kimura A, Nagata Y, Ohtsubo Y, Tsuda M.

Appl Environ Microbiol. 2017 Aug 1;83(16). pii: e00479-17. doi: 10.1128/AEM.00479-17. Print 2017 Aug 15.

20.

Complete Genome Sequence of Bradyrhizobium diazoefficiens USDA 122, a Nitrogen-Fixing Soybean Symbiont.

Sugawara M, Tsukui T, Kaneko T, Ohtsubo Y, Sato S, Nagata Y, Tsuda M, Mitsui H, Minamisawa K.

Genome Announc. 2017 Mar 2;5(9). pii: e01743-16. doi: 10.1128/genomeA.01743-16.

21.

People Are More Generous to a Partner Who Pays Attention to Them.

Ohtsubo Y, Yamaguchi C.

Evol Psychol. 2017 Jan;15(1):1474704916687310. doi: 10.1177/1474704916687310.

PMID:
28248555
22.

Cross-cultural regularities in the cognitive architecture of pride.

Sznycer D, Al-Shawaf L, Bereby-Meyer Y, Curry OS, De Smet D, Ermer E, Kim S, Kim S, Li NP, Lopez Seal MF, McClung J, O J, Ohtsubo Y, Quillien T, Schaub M, Sell A, van Leeuwen F, Cosmides L, Tooby J.

Proc Natl Acad Sci U S A. 2017 Feb 21;114(8):1874-1879. doi: 10.1073/pnas.1614389114. Epub 2017 Feb 6.

23.

Efficient N-tailing of blunt DNA ends by Moloney murine leukemia virus reverse transcriptase.

Ohtsubo Y, Nagata Y, Tsuda M.

Sci Rep. 2017 Feb 2;7:41769. doi: 10.1038/srep41769.

24.

Host Range of the Conjugative Transfer System of IncP-9 Naphthalene-Catabolic Plasmid NAH7 and Characterization of Its oriT Region and Relaxase.

Kishida K, Inoue K, Ohtsubo Y, Nagata Y, Tsuda M.

Appl Environ Microbiol. 2016 Dec 15;83(1). pii: e02359-16. doi: 10.1128/AEM.02359-16. Print 2017 Jan 1.

25.

Comparison of the complete genome sequences of four γ-hexachlorocyclohexane-degrading bacterial strains: insights into the evolution of bacteria able to degrade a recalcitrant man-made pesticide.

Tabata M, Ohhata S, Nikawadori Y, Kishida K, Sato T, Kawasumi T, Kato H, Ohtsubo Y, Tsuda M, Nagata Y.

DNA Res. 2016 Dec;23(6):581-599. Epub 2016 Aug 30.

26.

Surface Kondo effect and non-trivial metallic state of the Kondo insulator YbB12.

Hagiwara K, Ohtsubo Y, Matsunami M, Ideta S, Tanaka K, Miyazaki H, Rault JE, Fèvre PL, Bertran F, Taleb-Ibrahimi A, Yukawa R, Kobayashi M, Horiba K, Kumigashira H, Sumida K, Okuda T, Iga F, Kimura S.

Nat Commun. 2016 Aug 31;7:12690. doi: 10.1038/ncomms12690.

27.

The price of being seen to be just: an intention signalling strategy for indirect reciprocity.

Tanaka H, Ohtsuki H, Ohtsubo Y.

Proc Biol Sci. 2016 Jul 27;283(1835). pii: 20160694. doi: 10.1098/rspb.2016.0694.

28.

Complete Genome Sequence of Sphingopyxis terrae Strain 203-1 (NBRC 111660), a Polyethylene Glycol Degrader.

Ohtsubo Y, Nonoyama S, Nagata Y, Numata M, Tsuchikane K, Hosoyama A, Yamazoe A, Tsuda M, Fujita N, Kawai F.

Genome Announc. 2016 Jun 9;4(3). pii: e00530-16. doi: 10.1128/genomeA.00530-16.

29.

Complete Genome Sequence of Sphingopyxis macrogoltabida Strain 203N (NBRC 111659), a Polyethylene Glycol Degrader.

Ohtsubo Y, Nonoyama S, Nagata Y, Numata M, Tsuchikane K, Hosoyama A, Yamazoe A, Tsuda M, Fujita N, Kawai F.

Genome Announc. 2016 Jun 9;4(3). pii: e00529-16. doi: 10.1128/genomeA.00529-16.

30.

One-dimensional metallic surface states of Pt-induced atomic nanowires on Ge(0 0 1).

Yaji K, Kim S, Mochizuki I, Takeichi Y, Ohtsubo Y, Le Fèvre P, Bertran F, Taleb-Ibrahimi A, Shin S, Komori F.

J Phys Condens Matter. 2016 Jul 20;28(28):284001. doi: 10.1088/0953-8984/28/28/284001. Epub 2016 May 26.

PMID:
27228337
31.

Complete Genome Sequence of Algoriphagus sp. Strain M8-2, Isolated from a Brackish Lake.

Muraguchi Y, Kushimoto K, Ohtsubo Y, Suzuki T, Dohra H, Kimbara K, Shintani M.

Genome Announc. 2016 May 12;4(3). pii: e00347-16. doi: 10.1128/genomeA.00347-16.

32.

Complete genome sequence of Burkholderia caribensis Bcrs1W (NBRC110739), a strain co-residing with phenanthrene degrader Mycobacterium sp. EPa45.

Ohtsubo Y, Nonoyama S, Ogawa N, Kato H, Nagata Y, Tsuda M.

J Biotechnol. 2016 Jun 20;228:67-68. doi: 10.1016/j.jbiotec.2016.04.042. Epub 2016 Apr 26.

PMID:
27130496
33.

Complete Genome Sequence of a γ-Hexachlorocyclohexane Degrader, Sphingobium sp. Strain TKS, Isolated from a γ-Hexachlorocyclohexane-Degrading Microbial Community.

Tabata M, Ohhata S, Kawasumi T, Nikawadori Y, Kishida K, Sato T, Ohtsubo Y, Tsuda M, Nagata Y.

Genome Announc. 2016 Apr 7;4(2). pii: e00247-16. doi: 10.1128/genomeA.00247-16.

34.

Complete Genome Sequence of a γ-Hexachlorocyclohexane-Degrading Bacterium, Sphingobium sp. Strain MI1205.

Tabata M, Ohhata S, Nikawadori Y, Sato T, Kishida K, Ohtsubo Y, Tsuda M, Nagata Y.

Genome Announc. 2016 Apr 7;4(2). pii: e00246-16. doi: 10.1128/genomeA.00246-16.

35.

Spin to Charge Conversion at Room Temperature by Spin Pumping into a New Type of Topological Insulator: α-Sn Films.

Rojas-Sánchez JC, Oyarzún S, Fu Y, Marty A, Vergnaud C, Gambarelli S, Vila L, Jamet M, Ohtsubo Y, Taleb-Ibrahimi A, Le Fèvre P, Bertran F, Reyren N, George JM, Fert A.

Phys Rev Lett. 2016 Mar 4;116(9):096602. doi: 10.1103/PhysRevLett.116.096602. Epub 2016 Mar 1.

PMID:
26991190
36.

Complete Genome Sequence of Methylobacterium sp. Strain AMS5, an Isolate from a Soybean Stem.

Minami T, Ohtsubo Y, Anda M, Nagata Y, Tsuda M, Mitsui H, Sugawara M, Minamisawa K.

Genome Announc. 2016 Mar 17;4(2). pii: e00144-16. doi: 10.1128/genomeA.00144-16.

37.

Complete Genome Sequence of Cyanobacterium Leptolyngbya sp. NIES-3755.

Hirose Y, Fujisawa T, Ohtsubo Y, Katayama M, Misawa N, Wakazuki S, Shimura Y, Nakamura Y, Kawachi M, Yoshikawa H, Eki T, Kanesaki Y.

Genome Announc. 2016 Mar 17;4(2). pii: e00090-16. doi: 10.1128/genomeA.00090-16.

38.

Complete genome sequence of cyanobacterium Fischerella sp. NIES-3754, providing thermoresistant optogenetic tools.

Hirose Y, Fujisawa T, Ohtsubo Y, Katayama M, Misawa N, Wakazuki S, Shimura Y, Nakamura Y, Kawachi M, Yoshikawa H, Eki T, Kanesaki Y.

J Biotechnol. 2016 Feb 20;220:45-6. doi: 10.1016/j.jbiotec.2016.01.011. Epub 2016 Jan 16.

PMID:
26784989
39.

Surface Tomonaga-Luttinger-Liquid State on Bi/InSb(001).

Ohtsubo Y, Kishi J, Hagiwara K, Le Fèvre P, Bertran F, Taleb-Ibrahimi A, Yamane H, Ideta S, Matsunami M, Tanaka K, Kimura S.

Phys Rev Lett. 2015 Dec 18;115(25):256404. doi: 10.1103/PhysRevLett.115.256404. Epub 2015 Dec 17.

PMID:
26722934
40.

Complete Genome Sequence of Sphingopyxis macrogoltabida Type Strain NBRC 15033, Originally Isolated as a Polyethylene Glycol Degrader.

Ohtsubo Y, Nagata Y, Numata M, Tsuchikane K, Hosoyama A, Yamazoe A, Tsuda M, Fujita N, Kawai F.

Genome Announc. 2015 Dec 10;3(6). pii: e01401-15. doi: 10.1128/genomeA.01401-15.

41.

Complete Genome Sequence of a Polypropylene Glycol-Degrading Strain, Microbacterium sp. No. 7.

Ohtsubo Y, Nagata Y, Numata M, Tsuchikane K, Hosoyama A, Yamazoe A, Tsuda M, Fujita N, Kawai F.

Genome Announc. 2015 Dec 10;3(6). pii: e01400-15. doi: 10.1128/genomeA.01400-15.

42.

Complete genome sequence of cyanobacterium Nostoc sp. NIES-3756, a potentially useful strain for phytochrome-based bioengineering.

Hirose Y, Fujisawa T, Ohtsubo Y, Katayama M, Misawa N, Wakazuki S, Shimura Y, Nakamura Y, Kawachi M, Yoshikawa H, Eki T, Kanesaki Y.

J Biotechnol. 2016 Jan 20;218:51-2. doi: 10.1016/j.jbiotec.2015.12.002. Epub 2015 Dec 4.

PMID:
26656223
43.

Complete Genome Sequence of Polypropylene Glycol- and Polyethylene Glycol-Degrading Sphingopyxis macrogoltabida Strain EY-1.

Ohtsubo Y, Nagata Y, Numata M, Tsuchikane K, Hosoyama A, Yamazoe A, Tsuda M, Fujita N, Kawai F.

Genome Announc. 2015 Dec 3;3(6). pii: e01399-15. doi: 10.1128/genomeA.01399-15.

44.

Hierarchical spin-orbital polarization of a giant Rashba system.

Bawden L, Riley JM, Kim CH, Sankar R, Monkman EJ, Shai DE, Wei HI, Lochocki EB, Wells JW, Meevasana W, Kim TK, Hoesch M, Ohtsubo Y, Le Fèvre P, Fennie CJ, Shen KM, Chou F, King PD.

Sci Adv. 2015 Sep 25;1(8):e1500495. doi: 10.1126/sciadv.1500495. eCollection 2015 Sep.

45.

Complete Genome Sequence of a Phenanthrene Degrader, Burkholderia sp. HB-1 (NBRC 110738).

Ohtsubo Y, Moriya A, Kato H, Ogawa N, Nagata Y, Tsuda M.

Genome Announc. 2015 Nov 5;3(6). pii: e01283-15. doi: 10.1128/genomeA.01283-15.

46.

Bacterial clade with the ribosomal RNA operon on a small plasmid rather than the chromosome.

Anda M, Ohtsubo Y, Okubo T, Sugawara M, Nagata Y, Tsuda M, Minamisawa K, Mitsui H.

Proc Natl Acad Sci U S A. 2015 Nov 17;112(46):14343-7. doi: 10.1073/pnas.1514326112. Epub 2015 Nov 3.

47.

Complete Genome Sequence of Polyvinyl Alcohol-Degrading Strain Sphingopyxis sp. 113P3 (NBRC 111507).

Ohtsubo Y, Nagata Y, Numata M, Tsuchikane K, Hosoyama A, Yamazoe A, Tsuda M, Fujita N, Kawai F.

Genome Announc. 2015 Oct 15;3(5). pii: e01169-15. doi: 10.1128/genomeA.01169-15.

48.

Time-series metagenomic analysis reveals robustness of soil microbiome against chemical disturbance.

Kato H, Mori H, Maruyama F, Toyoda A, Oshima K, Endo R, Fuchu G, Miyakoshi M, Dozono A, Ohtsubo Y, Nagata Y, Hattori M, Fujiyama A, Kurokawa K, Tsuda M.

DNA Res. 2015 Dec;22(6):413-24. doi: 10.1093/dnares/dsv023. Epub 2015 Oct 1.

49.

Properties and biotechnological applications of natural and engineered haloalkane dehalogenases.

Nagata Y, Ohtsubo Y, Tsuda M.

Appl Microbiol Biotechnol. 2015 Dec;99(23):9865-81. doi: 10.1007/s00253-015-6954-x. Epub 2015 Sep 16. Review.

PMID:
26373728
50.

Complete Genome Sequence of a Phenanthrene Degrader, Mycobacterium sp. Strain EPa45 (NBRC 110737), Isolated from a Phenanthrene-Degrading Consortium.

Kato H, Ogawa N, Ohtsubo Y, Oshima K, Toyoda A, Mori H, Nagata Y, Kurokawa K, Hattori M, Fujiyama A, Tsuda M.

Genome Announc. 2015 Jul 16;3(4). pii: e00782-15. doi: 10.1128/genomeA.00782-15.

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