Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 50 of 293

1.

Patient Perspectives About Decisions to Share Medical Data and Biospecimens for Research.

Kim J, Kim H, Bell E, Bath T, Paul P, Pham A, Jiang X, Zheng K, Ohno-Machado L.

JAMA Netw Open. 2019 Aug 2;2(8):e199550. doi: 10.1001/jamanetworkopen.2019.9550.

2.

Machine learning-based predictive modeling of surgical intervention in glaucoma using systemic data from electronic health records.

Baxter SL, Marks C, Kuo TT, Ohno-Machado L, Weinreb RN.

Am J Ophthalmol. 2019 Jul 16. pii: S0002-9394(19)30328-9. doi: 10.1016/j.ajo.2019.07.005. [Epub ahead of print]

PMID:
31323204
3.

Privacy Policy and Technology in Biomedical Data Science.

Arellano AM, Dai W, Wang S, Jiang X, Ohno-Machado L.

Annu Rev Biomed Data Sci. 2018 Jul;1:115-129. doi: 10.1146/annurev-biodatasci-080917-013416.

4.

Time requirements of paper-based clinical workflows and after-hours documentation in a multi-specialty academic ophthalmology practice.

Baxter SL, Gali HE, Huang AE, Millen M, El-Kareh R, Nudleman E, Robbins SL, Heichel CWD, Camp AS, Korn BS, Lee JE, Kikkawa DO, Longhurst CA, Chiang MF, Hribar MR, Ohno-Machado L.

Am J Ophthalmol. 2019 Mar 22. pii: S0002-9394(19)30120-5. doi: 10.1016/j.ajo.2019.03.014. [Epub ahead of print]

PMID:
30910517
5.

Comparison of blockchain platforms: a systematic review and healthcare examples.

Kuo TT, Zavaleta Rojas H, Ohno-Machado L.

J Am Med Inform Assoc. 2019 May 1;26(5):462-478. doi: 10.1093/jamia/ocy185.

PMID:
30907419
6.

Fair compute loads enabled by blockchain: sharing models by alternating client and server roles.

Kuo TT, Gabriel RA, Ohno-Machado L.

J Am Med Inform Assoc. 2019 May 1;26(5):392-403. doi: 10.1093/jamia/ocy180.

PMID:
30892656
7.

Evaluating and sharing global genetic ancestry in biomedical datasets.

Harismendy O, Kim J, Xu X, Ohno-Machado L.

J Am Med Inform Assoc. 2019 May 1;26(5):457-461. doi: 10.1093/jamia/ocy194.

8.

Reflections on the journey of editing a scientific journal.

Ohno-Machado L.

J Am Med Inform Assoc. 2018 Dec 1;25(12):1584-1585. doi: 10.1093/jamia/ocy167. No abstract available.

PMID:
30541126
9.

Clinical informatics applications of medication reconciliation, decision support systems, and online portal patient-provider communications.

Ohno-Machado L.

J Am Med Inform Assoc. 2018 Nov 1;25(11):1431. doi: 10.1093/jamia/ocy150. No abstract available.

PMID:
30380084
10.

Data science and artificial intelligence to improve clinical practice and research.

Ohno-Machado L.

J Am Med Inform Assoc. 2018 Oct 1;25(10):1273. doi: 10.1093/jamia/ocy136. No abstract available.

PMID:
30312446
11.

Enhancing diversity to reduce health information disparities and build an evidence base for genomic medicine.

Hindorff LA, Bonham VL, Ohno-Machado L.

Per Med. 2018 Sep;15(5):403-412. doi: 10.2217/pme-2018-0037. Epub 2018 Sep 13.

12.

Sharing data from electronic health records within, across, and beyond healthcare institutions: Current trends and perspectives.

Ohno-Machado L.

J Am Med Inform Assoc. 2018 Sep 1;25(9):1113. doi: 10.1093/jamia/ocy116. No abstract available.

PMID:
30184157
13.

A Novel Stakeholder Engagement Approach for Patient-centered Outcomes Research.

Kim KK, Khodyakov D, Marie K, Taras H, Meeker D, Campos HO, Ohno-Machado L.

Med Care. 2018 Oct;56 Suppl 10 Suppl 1:S41-S47. doi: 10.1097/MLR.0000000000000790.

14.

Obesity Is Independently Associated With Higher Annual Burden and Costs of Hospitalization in Patients With Inflammatory Bowel Diseases.

Nguyen NH, Ohno-Machado L, Sandborn WJ, Singh S.

Clin Gastroenterol Hepatol. 2019 Mar;17(4):709-718.e7. doi: 10.1016/j.cgh.2018.07.004. Epub 2018 Sep 28.

PMID:
30012429
15.

Perfectly Secure and Efficient Two-Party Electronic-Health-Record Linkage.

Chen F, Jiang X, Wang S, Schilling LM, Meeker D, Ong T, Matheny ME, Doctor JN, Ohno-Machado L, Vaidya J.

IEEE Internet Comput. 2018 Mar-Apr;22(2):32-41. doi: 10.1109/MIC.2018.112102542. Epub 2018 Jan 16.

16.

A Scalable Privacy-preserving Data Generation Methodology for Exploratory Analysis.

Vaidya J, Shafiq B, Asani M, Adam N, Jiang X, Ohno-Machado L.

AMIA Annu Symp Proc. 2018 Apr 16;2017:1695-1704. eCollection 2017.

17.

Genomics and electronic health record systems.

Ohno-Machado L, Kim J, Gabriel RA, Kuo GM, Hogarth MA.

Hum Mol Genet. 2018 May 1;27(R1):R48-R55. doi: 10.1093/hmg/ddy104. Review.

18.

Finding relevant biomedical datasets: the UC San Diego solution for the bioCADDIE Retrieval Challenge.

Wei W, Ji Z, He Y, Zhang K, Ha Y, Li Q, Ohno-Machado L.

Database (Oxford). 2018 Jan 1;2018. doi: 10.1093/database/bay017.

19.

Infections and Cardiovascular Complications are Common Causes for Hospitalization in Older Patients with Inflammatory Bowel Diseases.

Nguyen NH, Ohno-Machado L, Sandborn WJ, Singh S.

Inflamm Bowel Dis. 2018 Mar 19;24(4):916-923. doi: 10.1093/ibd/izx089.

PMID:
29562273
20.

Annual Burden and Costs of Hospitalization for High-Need, High-Cost Patients With Chronic Gastrointestinal and Liver Diseases.

Nguyen NH, Khera R, Ohno-Machado L, Sandborn WJ, Singh S.

Clin Gastroenterol Hepatol. 2018 Aug;16(8):1284-1292.e30. doi: 10.1016/j.cgh.2018.02.015. Epub 2018 Feb 21.

21.

DataMed - an open source discovery index for finding biomedical datasets.

Chen X, Gururaj AE, Ozyurt B, Liu R, Soysal E, Cohen T, Tiryaki F, Li Y, Zong N, Jiang M, Rogith D, Salimi M, Kim HE, Rocca-Serra P, Gonzalez-Beltran A, Farcas C, Johnson T, Margolis R, Alter G, Sansone SA, Fore IM, Ohno-Machado L, Grethe JS, Xu H.

J Am Med Inform Assoc. 2018 Jan 13. doi: 10.1093/jamia/ocx121. [Epub ahead of print]

PMID:
29346583
22.

Prerequisites for International Exchanges of Health Information for Record Research: Comparison of Australian, Austrian, Finnish, Swiss, and US Policies.

Suominen H, Müller H, Ohno-Machado L, Salanterä S, Schreier G, Hanlen L.

Stud Health Technol Inform. 2017;245:1312.

PMID:
29295395
23.

Biomedical informatics and data science: evolving fields with significant overlap.

Brennan PF, Chiang MF, Ohno-Machado L.

J Am Med Inform Assoc. 2018 Jan 1;25(1):2-3. doi: 10.1093/jamia/ocx146. No abstract available.

PMID:
29267964
24.

A community effort to protect genomic data sharing, collaboration and outsourcing.

Wang S, Jiang X, Tang H, Wang X, Bu D, Carey K, Dyke SO, Fox D, Jiang C, Lauter K, Malin B, Sofia H, Telenti A, Wang L, Wang W, Ohno-Machado L.

NPJ Genom Med. 2017 Oct 27;2:33. doi: 10.1038/s41525-017-0036-1. eCollection 2017. Review.

25.

A publicly available benchmark for biomedical dataset retrieval: the reference standard for the 2016 bioCADDIE dataset retrieval challenge.

Cohen T, Roberts K, Gururaj AE, Chen X, Pournejati S, Alter G, Hersh WR, Demner-Fushman D, Ohno-Machado L, Xu H.

Database (Oxford). 2017 Jan 1;2017. doi: 10.1093/database/bax061.

26.

MiRIAD update: using alternative polyadenylation, protein interaction network analysis and additional species to enhance exploration of the role of intragenic miRNAs and their host genes.

Hinske LC, Dos Santos FRC, Ohara DT, Ohno-Machado L, Kreth S, Galante PAF.

Database (Oxford). 2017 Jan 1;2017. doi: 10.1093/database/bax053.

27.

User needs analysis and usability assessment of DataMed - a biomedical data discovery index.

Dixit R, Rogith D, Narayana V, Salimi M, Gururaj A, Ohno-Machado L, Xu H, Johnson TR.

J Am Med Inform Assoc. 2017 Nov 30. doi: 10.1093/jamia/ocx134. [Epub ahead of print]

PMID:
29202203
28.

Population Health Management for Inflammatory Bowel Disease.

Dulai PS, Singh S, Ohno-Machado L, Sandborn WJ.

Gastroenterology. 2018 Jan;154(1):37-45. doi: 10.1053/j.gastro.2017.09.052. Epub 2017 Nov 7. Review.

PMID:
29122544
29.

Mechanisms to protect the privacy of families when using the transmission disequilibrium test in genome-wide association studies.

Wang M, Ji Z, Wang S, Kim J, Yang H, Jiang X, Ohno-Machado L.

Bioinformatics. 2017 Dec 1;33(23):3716-3725. doi: 10.1093/bioinformatics/btx470.

30.

JAMIA is going green.

Ohno-Machado L.

J Am Med Inform Assoc. 2017 Nov 1;24(6):1045. doi: 10.1093/jamia/ocx103. No abstract available.

PMID:
29016975
31.

Blockchain distributed ledger technologies for biomedical and health care applications.

Kuo TT, Kim HE, Ohno-Machado L.

J Am Med Inform Assoc. 2017 Nov 1;24(6):1211-1220. doi: 10.1093/jamia/ocx068. Review.

32.

Education of informatics professionals and development of electronic information resources for clinicians, patients, health scientists, and study participants.

Ohno-Machado L.

J Am Med Inform Assoc. 2017 Jul 1;24(4):679. doi: 10.1093/jamia/ocx058. No abstract available.

PMID:
28927160
33.

DATS, the data tag suite to enable discoverability of datasets.

Sansone SA, Gonzalez-Beltran A, Rocca-Serra P, Alter G, Grethe JS, Xu H, Fore IM, Lyle J, Gururaj AE, Chen X, Kim HE, Zong N, Li Y, Liu R, Ozyurt IB, Ohno-Machado L.

Sci Data. 2017 Jun 6;4:170059. doi: 10.1038/sdata.2017.59.

34.

Finding useful data across multiple biomedical data repositories using DataMed.

Ohno-Machado L, Sansone SA, Alter G, Fore I, Grethe J, Xu H, Gonzalez-Beltran A, Rocca-Serra P, Gururaj AE, Bell E, Soysal E, Zong N, Kim HE.

Nat Genet. 2017 May 26;49(6):816-819. doi: 10.1038/ng.3864. No abstract available.

35.

Developing a framework for digital objects in the Big Data to Knowledge (BD2K) commons: Report from the Commons Framework Pilots workshop.

Jagodnik KM, Koplev S, Jenkins SL, Ohno-Machado L, Paten B, Schurer SC, Dumontier M, Verborgh R, Bui A, Ping P, McKenna NJ, Madduri R, Pillai A, Ma'ayan A.

J Biomed Inform. 2017 Jul;71:49-57. doi: 10.1016/j.jbi.2017.05.006. Epub 2017 May 10.

36.

Advancing healthcare and biomedical research via new data-driven approaches.

Ohno-Machado L.

J Am Med Inform Assoc. 2017 May 1;24(3):471. doi: 10.1093/jamia/ocx036. No abstract available.

PMID:
28403381
37.

A risk prediction score for acute kidney injury in the intensive care unit.

Malhotra R, Kashani KB, Macedo E, Kim J, Bouchard J, Wynn S, Li G, Ohno-Machado L, Mehta R.

Nephrol Dial Transplant. 2017 May 1;32(5):814-822. doi: 10.1093/ndt/gfx026.

PMID:
28402551
38.

Electronic health records: usability and utilization by health care providers and patients.

Ohno-Machado L.

J Am Med Inform Assoc. 2017 Apr 1;24(e1):e1. doi: 10.1093/jamia/ocx013. No abstract available.

PMID:
28395061
39.

Addressing Beacon re-identification attacks: quantification and mitigation of privacy risks.

Raisaro JL, Tramèr F, Ji Z, Bu D, Zhao Y, Carey K, Lloyd D, Sofia H, Baker D, Flicek P, Shringarpure S, Bustamante C, Wang S, Jiang X, Ohno-Machado L, Tang H, Wang X, Hubaux JP.

J Am Med Inform Assoc. 2017 Jul 1;24(4):799-805. doi: 10.1093/jamia/ocw167.

40.

Ensembles of NLP Tools for Data Element Extraction from Clinical Notes.

Kuo TT, Rao P, Maehara C, Doan S, Chaparro JD, Day ME, Farcas C, Ohno-Machado L, Hsu CN.

AMIA Annu Symp Proc. 2017 Feb 10;2016:1880-1889. eCollection 2016.

41.

Feasibility of Representing Data from Published Nursing Research Using the OMOP Common Data Model.

Kim H, Choi J, Jang I, Quach J, Ohno-Machado L.

AMIA Annu Symp Proc. 2017 Feb 10;2016:715-723. eCollection 2016.

42.

Integrated precision medicine: the role of electronic health records in delivering personalized treatment.

Sitapati A, Kim H, Berkovich B, Marmor R, Singh S, El-Kareh R, Clay B, Ohno-Machado L.

Wiley Interdiscip Rev Syst Biol Med. 2017 May;9(3). doi: 10.1002/wsbm.1378. Epub 2017 Feb 16. Review.

43.

Health information technology and patient safety.

Ohno-Machado L.

J Am Med Inform Assoc. 2017 Mar 1;24(2):243. doi: 10.1093/jamia/ocx008. No abstract available.

PMID:
28204518
44.

Whole genome sequencing of an African American family highlights toll like receptor 6 variants in Kawasaki disease susceptibility.

Kim J, Shimizu C, Kingsmore SF, Veeraraghavan N, Levy E, Ribeiro Dos Santos AM, Yang H, Flatley J, Hoang LT, Hibberd ML, Tremoulet AH, Harismendy O, Ohno-Machado L, Burns JC.

PLoS One. 2017 Feb 2;12(2):e0170977. doi: 10.1371/journal.pone.0170977. eCollection 2017.

45.

A Predictive Model for Extended Postanesthesia Care Unit Length of Stay in Outpatient Surgeries.

Gabriel RA, Waterman RS, Kim J, Ohno-Machado L.

Anesth Analg. 2017 May;124(5):1529-1536. doi: 10.1213/ANE.0000000000001827.

PMID:
28079580
46.

PRINCESS: Privacy-protecting Rare disease International Network Collaboration via Encryption through Software guard extensionS.

Chen F, Wang S, Jiang X, Ding S, Lu Y, Kim J, Sahinalp SC, Shimizu C, Burns JC, Wright VJ, Png E, Hibberd ML, Lloyd DD, Yang H, Telenti A, Bloss CS, Fox D, Lauter K, Ohno-Machado L.

Bioinformatics. 2017 Mar 15;33(6):871-878. doi: 10.1093/bioinformatics/btw758.

47.

Using health information technology for clinical decision support and predictive analytics.

Ohno-Machado L.

J Am Med Inform Assoc. 2017 Jan;24(1):1. doi: 10.1093/jamia/ocw163. No abstract available.

PMID:
28039394
48.

Data-driven informatics tools targeting patients and providers.

Ohno-Machado L; Editor-in-Chief.

J Am Med Inform Assoc. 2016 Nov;23(6):1039. doi: 10.1093/jamia/ocw149. No abstract available.

PMID:
27880716
49.

Protecting genomic data analytics in the cloud: state of the art and opportunities.

Tang H, Jiang X, Wang X, Wang S, Sofia H, Fox D, Lauter K, Malin B, Telenti A, Xiong L, Ohno-Machado L.

BMC Med Genomics. 2016 Oct 13;9(1):63.

50.

Biospecimen Sharing Among Hispanic Women in a Safety-Net Clinic: Implications for the Precision Medicine Initiative.

Nodora JN, Komenaka IK, Bouton ME, Ohno-Machado L, Schwab R, Kim HE, Farcas C, Perez G, Elena Martinez M.

J Natl Cancer Inst. 2016 Sep 28;109(2). doi: 10.1093/jnci/djw201. Print 2017 Feb.

Supplemental Content

Loading ...
Support Center