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Items: 1 to 50 of 304

1.

The Eleanor ncRNAs activate the topological domain of the ESR1 locus to balance against apoptosis.

Abdalla MOA, Yamamoto T, Maehara K, Nogami J, Ohkawa Y, Miura H, Poonperm R, Hiratani I, Nakayama H, Nakao M, Saitoh N.

Nat Commun. 2019 Aug 22;10(1):3778. doi: 10.1038/s41467-019-11378-4.

PMID:
31439835
2.

Biochemical analysis of nucleosome targeting by Tn5 transposase.

Sato S, Arimura Y, Kujirai T, Harada A, Maehara K, Nogami J, Ohkawa Y, Kurumizaka H.

Open Biol. 2019 Aug 30;9(8):190116. doi: 10.1098/rsob.190116. Epub 2019 Aug 14.

3.

Dmrt factors determine the positional information of cerebral cortical progenitors via differential suppression of homeobox genes.

Konno D, Kishida C, Maehara K, Ohkawa Y, Kiyonari H, Okada S, Matsuzaki F.

Development. 2019 Aug 13;146(15). pii: dev174243. doi: 10.1242/dev.174243.

PMID:
31371378
4.

Calcineurin broadly regulates the initiation of skeletal muscle-specific gene expression by binding target promoters and facilitating the interaction of the SWI/SNF chromatin remodeling enzyme.

Witwicka H, Nogami J, Syed SA, Maehara K, Padilla-Benavides T, Ohkawa Y, Imbalzano AN.

Mol Cell Biol. 2019 Jul 15. pii: MCB.00063-19. doi: 10.1128/MCB.00063-19. [Epub ahead of print]

5.

Regulation of ectopic heterochromatin-mediated epigenetic diversification by the JmjC family protein Epe1.

Sorida M, Hirauchi T, Ishizaki H, Kaito W, Shimada A, Mori C, Chikashige Y, Hiraoka Y, Suzuki Y, Ohkawa Y, Kato H, Takahata S, Murakami Y.

PLoS Genet. 2019 Jun 17;15(6):e1008129. doi: 10.1371/journal.pgen.1008129. eCollection 2019 Jun.

6.

Anti-tumour effects of antimicrobial peptides, components of the innate immune system, against haematopoietic tumours in Drosophila mxc mutants.

Araki M, Kurihara M, Kinoshita S, Awane R, Sato T, Ohkawa Y, Inoue YH.

Dis Model Mech. 2019 Jun 18;12(6). pii: dmm037721. doi: 10.1242/dmm.037721.

7.

CLEC3A, MMP7, and LCN2 as novel markers for predicting recurrence in resected G1 and G2 pancreatic neuroendocrine tumors.

Miki M, Oono T, Fujimori N, Takaoka T, Kawabe K, Miyasaka Y, Ohtsuka T, Saito D, Nakamura M, Ohkawa Y, Oda Y, Suyama M, Ito T, Ogawa Y.

Cancer Med. 2019 Jul;8(8):3748-3760. doi: 10.1002/cam4.2232. Epub 2019 May 25.

8.

Macrophage centripetal migration drives spontaneous healing process after spinal cord injury.

Kobayakawa K, Ohkawa Y, Yoshizaki S, Tamaru T, Saito T, Kijima K, Yokota K, Hara M, Kubota K, Matsumoto Y, Harimaya K, Ozato K, Masuda T, Tsuda M, Tamura T, Inoue K, Edgerton VR, Iwamoto Y, Nakashima Y, Okada S.

Sci Adv. 2019 May 15;5(5):eaav5086. doi: 10.1126/sciadv.aav5086. eCollection 2019 May.

9.

New era of research on cancer-associated glycosphingolipids.

Furukawa K, Ohmi Y, Ohkawa Y, Bhuiyan RH, Zhang P, Tajima O, Hashimoto N, Hamamura K, Furukawa K.

Cancer Sci. 2019 May;110(5):1544-1551. doi: 10.1111/cas.14005. Epub 2019 Apr 29. Review.

10.

Elucidation of the enigma of glycosphingolipids in the regulation of inflammation and degeneration - Great progress over the last 70 years.

Furukawa K, Ohmi Y, Kondo Y, Bhuiyan RH, Tajima O, Zhang P, Ohkawa Y, Furukawa K.

Proc Jpn Acad Ser B Phys Biol Sci. 2019;95(3):136-149. doi: 10.2183/pjab.95.011. Review.

11.

miR-124 dosage regulates prefrontal cortex function by dopaminergic modulation.

Kozuka T, Omori Y, Watanabe S, Tarusawa E, Yamamoto H, Chaya T, Furuhashi M, Morita M, Sato T, Hirose S, Ohkawa Y, Yoshimura Y, Hikida T, Furukawa T.

Sci Rep. 2019 Mar 5;9(1):3445. doi: 10.1038/s41598-019-38910-2.

12.

Locomotor Training Increases Synaptic Structure With High NGL-2 Expression After Spinal Cord Hemisection.

Kobayakawa K, DePetro KA, Zhong H, Pham B, Hara M, Harada A, Nogami J, Ohkawa Y, Edgerton VR.

Neurorehabil Neural Repair. 2019 Mar;33(3):225-231. doi: 10.1177/1545968319829456. Epub 2019 Feb 19.

PMID:
30782076
13.

Cell-autonomous and redundant roles of Hey1 and HeyL in muscle stem cells: HeyL requires Hes1 to bind diverse DNA sites.

Noguchi YT, Nakamura M, Hino N, Nogami J, Tsuji S, Sato T, Zhang L, Tsujikawa K, Tanaka T, Izawa K, Okada Y, Doi T, Kokubo H, Harada A, Uezumi A, Gessler M, Ohkawa Y, Fukada SI.

Development. 2019 Feb 20;146(4). pii: dev163618. doi: 10.1242/dev.163618.

14.

Pathological changes of distal motor neurons after complete spinal cord injury.

Yokota K, Kubota K, Kobayakawa K, Saito T, Hara M, Kijima K, Maeda T, Katoh H, Ohkawa Y, Nakashima Y, Okada S.

Mol Brain. 2019 Jan 9;12(1):4. doi: 10.1186/s13041-018-0422-3.

15.

A chromatin integration labelling method enables epigenomic profiling with lower input.

Harada A, Maehara K, Handa T, Arimura Y, Nogami J, Hayashi-Takanaka Y, Shirahige K, Kurumizaka H, Kimura H, Ohkawa Y.

Nat Cell Biol. 2019 Feb;21(2):287-296. doi: 10.1038/s41556-018-0248-3. Epub 2018 Dec 10.

PMID:
30532068
16.

Loss of Enzyme Activity in Mutated B4GALNT1 Gene Products in Patients with Hereditary Spastic Paraplegia Results in Relatively Mild Neurological Disorders: Similarity with Phenotypes of B4galnt1 Knockout Mice.

Bhuiyan RH, Ohmi Y, Ohkawa Y, Zhang P, Takano M, Hashimoto N, Okajima T, Furukawa K, Furukawa K.

Neuroscience. 2019 Jan 15;397:94-106. doi: 10.1016/j.neuroscience.2018.11.034. Epub 2018 Dec 4.

PMID:
30521973
17.

Fetal Leydig cells dedifferentiate and serve as adult Leydig stem cells.

Shima Y, Miyabayashi K, Sato T, Suyama M, Ohkawa Y, Doi M, Okamura H, Suzuki K.

Development. 2018 Dec 5;145(23). pii: dev169136. doi: 10.1242/dev.169136.

18.

Transcriptome profiling of refractory atopic keratoconjunctivitis by RNA sequencing.

Matsuda A, Asada Y, Suita N, Iwamoto S, Hirakata T, Yokoi N, Ohkawa Y, Okada Y, Yokomizo T, Ebihara N.

J Allergy Clin Immunol. 2019 Apr;143(4):1610-1614.e6. doi: 10.1016/j.jaci.2018.11.007. Epub 2018 Nov 22. No abstract available.

PMID:
30471305
19.

Differential roles of gangliosides in malignant properties of melanomas.

Ohmi Y, Kambe M, Ohkawa Y, Hamamura K, Tajima O, Takeuchi R, Furukawa K, Furukawa K.

PLoS One. 2018 Nov 21;13(11):e0206881. doi: 10.1371/journal.pone.0206881. eCollection 2018.

20.

Mouse polycomb group gene Cbx2 promotes osteoblastic but suppresses adipogenic differentiation in postnatal long bones.

Katoh-Fukui Y, Baba T, Sato T, Otake H, Nagakui-Noguchi Y, Shindo M, Suyama M, Ohkawa Y, Tsumura H, Morohashi KI, Fukami M.

Bone. 2019 Mar;120:219-231. doi: 10.1016/j.bone.2018.10.021. Epub 2018 Oct 30.

PMID:
30389610
21.

[Surgical Treatment of Acute Infective Endocarditis after Transcatheter Aortic Valve Replacement].

Ohori S, Fujita K, Morimoto K, Suzuki M, Baba T, Yokoyama H, Nomura F, Ohkawa Y, Sugiki K, Ohno T.

Kyobu Geka. 2018 Oct;71(11):929-931. Japanese.

PMID:
30310004
22.

Ad4BP/SF-1 regulates cholesterol synthesis to boost the production of steroids.

Baba T, Otake H, Inoue M, Sato T, Ishihara Y, Moon JY, Tsuchiya M, Miyabayashi K, Ogawa H, Shima Y, Wang L, Sato R, Yamazaki T, Suyama M, Nomura M, Choi MH, Ohkawa Y, Morohashi KI.

Commun Biol. 2018 Mar 22;1:18. doi: 10.1038/s42003-018-0020-z. eCollection 2018.

23.

Prolonged inhibition of hepatocellular carcinoma cell proliferation by combinatorial expression of defined transcription factors.

Takashima Y, Horisawa K, Udono M, Ohkawa Y, Suzuki A.

Cancer Sci. 2018 Nov;109(11):3543-3553. doi: 10.1111/cas.13798. Epub 2018 Oct 15.

24.

Cancer-associated mutations of histones H2B, H3.1 and H2A.Z.1 affect the structure and stability of the nucleosome.

Arimura Y, Ikura M, Fujita R, Noda M, Kobayashi W, Horikoshi N, Sun J, Shi L, Kusakabe M, Harata M, Ohkawa Y, Tashiro S, Kimura H, Ikura T, Kurumizaka H.

Nucleic Acids Res. 2018 Nov 2;46(19):10007-10018. doi: 10.1093/nar/gky661.

25.

MNase, as a probe to study the sequence-dependent site exposures in the +1 nucleosomes of yeast.

Luo D, Kato D, Nogami J, Ohkawa Y, Kurumizaka H, Kono H.

Nucleic Acids Res. 2018 Aug 21;46(14):7124-7137. doi: 10.1093/nar/gky502.

26.

Genome-wide analysis of the spatiotemporal regulation of firing and dormant replication origins in human cells.

Sugimoto N, Maehara K, Yoshida K, Ohkawa Y, Fujita M.

Nucleic Acids Res. 2018 Jul 27;46(13):6683-6696. doi: 10.1093/nar/gky476.

27.

The Autism-Related Protein CHD8 Cooperates with C/EBPβ to Regulate Adipogenesis.

Kita Y, Katayama Y, Shiraishi T, Oka T, Sato T, Suyama M, Ohkawa Y, Miyata K, Oike Y, Shirane M, Nishiyama M, Nakayama KI.

Cell Rep. 2018 May 15;23(7):1988-2000. doi: 10.1016/j.celrep.2018.04.050.

28.

Gangliosides in Inflammation and Neurodegeneration.

Furukawa K, Ohmi Y, Tajima O, Ohkawa Y, Kondo Y, Shuting J, Hashimoto N, Furukawa K.

Prog Mol Biol Transl Sci. 2018;156:265-287. doi: 10.1016/bs.pmbts.2018.01.009. Epub 2018 Apr 10. Review.

PMID:
29747817
29.

Histone H3.3 sub-variant H3mm7 is required for normal skeletal muscle regeneration.

Harada A, Maehara K, Ono Y, Taguchi H, Yoshioka K, Kitajima Y, Xie Y, Sato Y, Iwasaki T, Nogami J, Okada S, Komatsu T, Semba Y, Takemoto T, Kimura H, Kurumizaka H, Ohkawa Y.

Nat Commun. 2018 Apr 11;9(1):1400. doi: 10.1038/s41467-018-03845-1.

30.

Cryo-EM structure of the nucleosome containing the ALB1 enhancer DNA sequence.

Takizawa Y, Tanaka H, Machida S, Koyama M, Maehara K, Ohkawa Y, Wade PA, Wolf M, Kurumizaka H.

Open Biol. 2018 Mar;8(3). pii: 170255. doi: 10.1098/rsob.170255.

31.

Direct Reprogramming of Spiral Ganglion Non-neuronal Cells into Neurons: Toward Ameliorating Sensorineural Hearing Loss by Gene Therapy.

Noda T, Meas SJ, Nogami J, Amemiya Y, Uchi R, Ohkawa Y, Nishimura K, Dabdoub A.

Front Cell Dev Biol. 2018 Feb 14;6:16. doi: 10.3389/fcell.2018.00016. eCollection 2018.

32.

Enhancement of malignant properties of human glioma cells by ganglioside GD3/GD2.

Iwasawa T, Zhang P, Ohkawa Y, Momota H, Wakabayashi T, Ohmi Y, Bhuiyan RH, Furukawa K, Furukawa K.

Int J Oncol. 2018 Apr;52(4):1255-1266. doi: 10.3892/ijo.2018.4266. Epub 2018 Feb 7.

PMID:
29436609
33.

Sensitive detection of fluorescence in western blotting by merging images.

Kondo Y, Higa S, Iwasaki T, Matsumoto T, Maehara K, Harada A, Baba Y, Fujita M, Ohkawa Y.

PLoS One. 2018 Jan 19;13(1):e0191532. doi: 10.1371/journal.pone.0191532. eCollection 2018.

34.

Identification of miR-305, a microRNA that promotes aging, and its target mRNAs in Drosophila.

Ueda M, Sato T, Ohkawa Y, Inoue YH.

Genes Cells. 2018 Feb;23(2):80-93. doi: 10.1111/gtc.12555. Epub 2018 Jan 5.

35.

Ser7 of RNAPII-CTD facilitates heterochromatin formation by linking ncRNA to RNAi.

Kajitani T, Kato H, Chikashige Y, Tsutsumi C, Hiraoka Y, Kimura H, Ohkawa Y, Obuse C, Hermand D, Murakami Y.

Proc Natl Acad Sci U S A. 2017 Dec 26;114(52):E11208-E11217. doi: 10.1073/pnas.1714579115. Epub 2017 Dec 13.

36.

Roles of histone H3.5 in human spermatogenesis and spermatogenic disorders.

Shiraishi K, Shindo A, Harada A, Kurumizaka H, Kimura H, Ohkawa Y, Matsuyama H.

Andrology. 2018 Jan;6(1):158-165. doi: 10.1111/andr.12438. Epub 2017 Nov 27.

37.

ASC amino acid transporter 2, defined by enzyme-mediated activation of radical sources, enhances malignancy of GD2-positive small-cell lung cancer.

Esaki N, Ohkawa Y, Hashimoto N, Tsuda Y, Ohmi Y, Bhuiyan RH, Kotani N, Honke K, Enomoto A, Takahashi M, Furukawa K, Furukawa K.

Cancer Sci. 2018 Jan;109(1):141-153. doi: 10.1111/cas.13448. Epub 2018 Jan 3.

38.

Histone methyltransferase G9a is a key regulator of the starvation-induced behaviors in Drosophila melanogaster.

Shimaji K, Tanaka R, Maeda T, Ozaki M, Yoshida H, Ohkawa Y, Sato T, Suyama M, Yamaguchi M.

Sci Rep. 2017 Nov 7;7(1):14763. doi: 10.1038/s41598-017-15344-2.

39.

Temporal regulation of chromatin during myoblast differentiation.

Harada A, Ohkawa Y, Imbalzano AN.

Semin Cell Dev Biol. 2017 Dec;72:77-86. doi: 10.1016/j.semcdb.2017.10.022. Epub 2017 Oct 28. Review.

40.

Biochemical and immunological characterization of a novel monoclonal antibody against mouse leukotriene B4 receptor 1.

Sasaki F, Koga T, Saeki K, Okuno T, Kazuno S, Fujimura T, Ohkawa Y, Yokomizo T.

PLoS One. 2017 Sep 18;12(9):e0185133. doi: 10.1371/journal.pone.0185133. eCollection 2017.

41.

The requirement of Mettl3-promoted MyoD mRNA maintenance in proliferative myoblasts for skeletal muscle differentiation.

Kudou K, Komatsu T, Nogami J, Maehara K, Harada A, Saeki H, Oki E, Maehara Y, Ohkawa Y.

Open Biol. 2017 Sep;7(9). pii: 170119. doi: 10.1098/rsob.170119.

42.

The novel heme-dependent inducible protein, SRRD regulates heme biosynthesis and circadian rhythms.

Adachi Y, Umeda M, Kawazoe A, Sato T, Ohkawa Y, Kitajima S, Izawa S, Sagami I, Taketani S.

Arch Biochem Biophys. 2017 Oct 1;631:19-29. doi: 10.1016/j.abb.2017.08.006. Epub 2017 Aug 9.

PMID:
28802827
43.

Persistent detection of alternatively spliced BCR-ABL variant results in a failure to achieve deep molecular response.

Yuda J, Miyamoto T, Odawara J, Ohkawa Y, Semba Y, Hayashi M, Miyamura K, Tanimoto M, Yamamoto K, Taniwaki M, Akashi K.

Cancer Sci. 2017 Nov;108(11):2204-2212. doi: 10.1111/cas.13353. Epub 2017 Sep 21.

44.

Evolution of the sperm methylome of primates is associated with retrotransposon insertions and genome instability.

Fukuda K, Inoguchi Y, Ichiyanagi K, Ichiyanagi T, Go Y, Nagano M, Yanagawa Y, Takaesu N, Ohkawa Y, Imai H, Sasaki H.

Hum Mol Genet. 2017 Sep 15;26(18):3508-3519. doi: 10.1093/hmg/ddx236.

PMID:
28637190
45.

Interaction of reactive astrocytes with type I collagen induces astrocytic scar formation through the integrin-N-cadherin pathway after spinal cord injury.

Hara M, Kobayakawa K, Ohkawa Y, Kumamaru H, Yokota K, Saito T, Kijima K, Yoshizaki S, Harimaya K, Nakashima Y, Okada S.

Nat Med. 2017 Jul;23(7):818-828. doi: 10.1038/nm.4354. Epub 2017 Jun 19.

PMID:
28628111
46.

Glycolipids: Essential regulator of neuro-inflammation, metabolism and gliomagenesis.

Furukawa K, Ohmi Y, Ji S, Zhang P, Bhuiyan RH, Ohkawa Y, Tajima O, Hashimoto N, Furukawa K.

Biochim Biophys Acta Gen Subj. 2017 Oct;1861(10):2479-2484. doi: 10.1016/j.bbagen.2017.06.007. Epub 2017 Jun 7. Review.

PMID:
28602513
47.

Chd2 regulates chromatin for proper gene expression toward differentiation in mouse embryonic stem cells.

Semba Y, Harada A, Maehara K, Oki S, Meno C, Ueda J, Yamagata K, Suzuki A, Onimaru M, Nogami J, Okada S, Akashi K, Ohkawa Y.

Nucleic Acids Res. 2017 Sep 6;45(15):8758-8772. doi: 10.1093/nar/gkx475.

48.

Comparison of the Long-Term Outcomes of Mechanical and Bioprosthetic Aortic Valves - A Propensity Score Analysis.

Minakata K, Tanaka S, Tamura N, Yanagi S, Ohkawa Y, Okonogi S, Kaneko T, Usui A, Abe T, Shimamoto M, Takahara Y, Yamanaka K, Yaku H, Sakata R.

Circ J. 2017 Jul 25;81(8):1198-1206. doi: 10.1253/circj.CJ-17-0154. Epub 2017 Apr 12.

49.

Crystal structure of the overlapping dinucleosome composed of hexasome and octasome.

Kato D, Osakabe A, Arimura Y, Mizukami Y, Horikoshi N, Saikusa K, Akashi S, Nishimura Y, Park SY, Nogami J, Maehara K, Ohkawa Y, Matsumoto A, Kono H, Inoue R, Sugiyama M, Kurumizaka H.

Science. 2017 Apr 14;356(6334):205-208. doi: 10.1126/science.aak9867.

PMID:
28408607
50.

Control of tissue size and development by a regulatory element in the yorkie 3'UTR.

Umegawachi T, Yoshida H, Koshida H, Yamada M, Ohkawa Y, Sato T, Suyama M, Krause HM, Yamaguchi M.

Am J Cancer Res. 2017 Mar 1;7(3):673-687. eCollection 2017.

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