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Items: 5

1.

MiRIAD update: using alternative polyadenylation, protein interaction network analysis and additional species to enhance exploration of the role of intragenic miRNAs and their host genes.

Hinske LC, Dos Santos FRC, Ohara DT, Ohno-Machado L, Kreth S, Galante PAF.

Database (Oxford). 2017 Jan 1;2017. doi: 10.1093/database/bax053.

2.

miRIAD-integrating microRNA inter- and intragenic data.

Hinske LC, Fran├ža GS, Torres HA, Ohara DT, Lopes-Ramos CM, Heyn J, Reis LF, Ohno-Machado L, Kreth S, Galante PA.

Database (Oxford). 2014 Oct 6;2014. pii: bau099. doi: 10.1093/database/bau099. Print 2014.

3.

SurfaceomeDB: a cancer-orientated database for genes encoding cell surface proteins.

de Souza JE, Galante PA, de Almeida RV, da Cunha JP, Ohara DT, Ohno-Machado L, Old LJ, de Souza SJ.

Cancer Immun. 2012;12:15. Epub 2012 Dec 28.

4.

SPLOOCE: a new portal for the analysis of human splicing variants.

Kroll JE, Galante PA, Ohara DT, Navarro FC, Ohno-Machado L, de Souza SJ.

RNA Biol. 2012 Nov;9(11):1339-43. doi: 10.4161/rna.22182. Epub 2012 Oct 12.

5.

Bioinformatics construction of the human cell surfaceome.

da Cunha JP, Galante PA, de Souza JE, de Souza RF, Carvalho PM, Ohara DT, Moura RP, Oba-Shinja SM, Marie SK, Silva WA Jr, Perez RO, Stransky B, Pieprzyk M, Moore J, Caballero O, Gama-Rodrigues J, Habr-Gama A, Kuo WP, Simpson AJ, Camargo AA, Old LJ, de Souza SJ.

Proc Natl Acad Sci U S A. 2009 Sep 29;106(39):16752-7. doi: 10.1073/pnas.0907939106. Epub 2009 Sep 15.

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