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Items: 17

1.

Bioenergetics analysis of ammonia-oxidizing bacteria and the estimation of their maximum growth yield.

González-Cabaleiro R, Curtis TP, Ofiţeru ID.

Water Res. 2019 May 1;154:238-245. doi: 10.1016/j.watres.2019.01.054. Epub 2019 Feb 10.

2.

Neutral mechanisms and niche differentiation in steady-state insular microbial communities revealed by single cell analysis.

Liu Z, Cichocki N, Hübschmann T, Süring C, Ofiţeru ID, Sloan WT, Grimm V, Müller S.

Environ Microbiol. 2019 Jan;21(1):164-181. doi: 10.1111/1462-2920.14437. Epub 2018 Nov 8.

PMID:
30289191
3.

Corrigendum to "Electron bifurcation mechanism and homoacetogenesis explain products yields in mixed culture anaerobic fermentations"[Water Res. 141(2018) 349-356].

Regueira A, González-Cabaleiro R, Ofiţeru ID, Rodríguez J, Lema JM.

Water Res. 2018 Oct 1;142:528. doi: 10.1016/j.watres.2018.07.010. Epub 2018 Jul 11. No abstract available.

PMID:
30001878
4.

Electron bifurcation mechanism and homoacetogenesis explain products yields in mixed culture anaerobic fermentations.

Regueira A, González-Cabaleiro R, Ofiţeru ID, Rodríguez J, Lema JM.

Water Res. 2018 Sep 15;141:349-356. doi: 10.1016/j.watres.2018.05.013. Epub 2018 May 11. Erratum in: Water Res. 2018 Oct 1;142:528.

5.

SynBioHub: A Standards-Enabled Design Repository for Synthetic Biology.

McLaughlin JA, Myers CJ, Zundel Z, Mısırlı G, Zhang M, Ofiteru ID, Goñi-Moreno A, Wipat A.

ACS Synth Biol. 2018 Feb 16;7(2):682-688. doi: 10.1021/acssynbio.7b00403. Epub 2018 Jan 30.

PMID:
29316788
6.

Heterogeneity in Pure Microbial Systems: Experimental Measurements and Modeling.

González-Cabaleiro R, Mitchell AM, Smith W, Wipat A, Ofiţeru ID.

Front Microbiol. 2017 Sep 20;8:1813. doi: 10.3389/fmicb.2017.01813. eCollection 2017. Review.

7.

A mechanistic Individual-based Model of microbial communities.

Jayathilake PG, Gupta P, Li B, Madsen C, Oyebamiji O, González-Cabaleiro R, Rushton S, Bridgens B, Swailes D, Allen B, McGough AS, Zuliani P, Ofiteru ID, Wilkinson D, Chen J, Curtis T.

PLoS One. 2017 Aug 3;12(8):e0181965. doi: 10.1371/journal.pone.0181965. eCollection 2017.

8.

Microbial catabolic activities are naturally selected by metabolic energy harvest rate.

González-Cabaleiro R, Ofiţeru ID, Lema JM, Rodríguez J.

ISME J. 2015 Dec;9(12):2630-41. doi: 10.1038/ismej.2015.69. Epub 2015 Jul 10.

9.

A preliminary and qualitative study of resource ratio theory to nitrifying lab-scale bioreactors.

Bellucci M, Ofiţeru ID, Beneduce L, Graham DW, Head IM, Curtis TP.

Microb Biotechnol. 2015 May;8(3):590-603. doi: 10.1111/1751-7915.12284. Epub 2015 Apr 15.

10.

Multi-scale modelling of bioreactor-separator system for wastewater treatment with two-dimensional activated sludge floc dynamics.

Ofiţeru ID, Bellucci M, Picioreanu C, Lavric V, Curtis TP.

Water Res. 2014 Mar 1;50:382-95. doi: 10.1016/j.watres.2013.10.053. Epub 2013 Oct 30.

11.

Nitrification in hybrid bioreactors treating simulated domestic wastewater.

Bellucci M, Ofiţeru ID, Head IM, Curtis TP, Graham DW.

J Appl Microbiol. 2013 Aug;115(2):621-30. doi: 10.1111/jam.12233. Epub 2013 May 16.

12.

Conditional confined oscillatory dynamics of Escherichia coli strain K12-MG1655 in chemostat systems.

Ofiţeru ID, Ferdeş M, Knapp CW, Graham DW, Lavric V.

Appl Microbiol Biotechnol. 2012 Apr;94(1):185-92. doi: 10.1007/s00253-011-3697-1. Epub 2011 Nov 16.

PMID:
22086070
13.

Low-dissolved-oxygen nitrifying systems exploit ammonia-oxidizing bacteria with unusually high yields.

Bellucci M, Ofiteru ID, Graham DW, Head IM, Curtis TP.

Appl Environ Microbiol. 2011 Nov;77(21):7787-96. doi: 10.1128/AEM.00330-11. Epub 2011 Sep 16.

14.

Non-linear population dynamics in chemostats associated with live-dead cell cycling in Escherichia coli strain K12-MG1655.

Chi Fru E, Ofiţeru ID, Lavric V, Graham DW.

Appl Microbiol Biotechnol. 2011 Feb;89(3):791-8. doi: 10.1007/s00253-010-2895-6. Epub 2010 Oct 3.

PMID:
20890753
15.

Combined niche and neutral effects in a microbial wastewater treatment community.

Ofiteru ID, Lunn M, Curtis TP, Wells GF, Criddle CS, Francis CA, Sloan WT.

Proc Natl Acad Sci U S A. 2010 Aug 31;107(35):15345-50. doi: 10.1073/pnas.1000604107. Epub 2010 Aug 12.

16.

Continuous hybridoma bioreactor: sensitivity analysis and optimal control.

Lavric V, Ofiţeru ID, Woinaroschy A.

Biotechnol Appl Biochem. 2006 May;44(Pt 2):81-92.

PMID:
16409168
17.

A sensitivity analysis of the fed-batch animal-cell bioreactor with respect to some control parameters.

Lavric V, Ofiţeru ID, Woinaroschy A.

Biotechnol Appl Biochem. 2005 Feb;41(Pt 1):29-35.

PMID:
15270673

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