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Items: 1 to 50 of 58

1.

Mutational analysis of a Drosophila neuroblast enhancer governing nubbin expression during CNS development.

Ross J, Kuzin A, Brody T, Odenwald WF.

Genesis. 2018 Jul 13. doi: 10.1002/dvg.23237. [Epub ahead of print]

PMID:
30005136
2.

Structure and cis-regulatory analysis of a Drosophila grainyhead neuroblast enhancer.

Kuzin A, Smith S, Brody T, Odenwald WF.

Genesis. 2018 Mar;56(3):e23094. doi: 10.1002/dvg.23094.

PMID:
29417712
3.

Flavivirus and Filovirus EvoPrinters: New alignment tools for the comparative analysis of viral evolution.

Brody T, Yavatkar AS, Park DS, Kuzin A, Ross J, Odenwald WF.

PLoS Negl Trop Dis. 2017 Jun 16;11(6):e0005673. doi: 10.1371/journal.pntd.0005673. eCollection 2017 Jun.

4.

cis-regulatory analysis of the Drosophila pdm locus reveals a diversity of neural enhancers.

Ross J, Kuzin A, Brody T, Odenwald WF.

BMC Genomics. 2015 Sep 16;16:700. doi: 10.1186/s12864-015-1897-2.

5.

Making Drosophila lineage-restricted drivers via patterned recombination in neuroblasts.

Awasaki T, Kao CF, Lee YJ, Yang CP, Huang Y, Pfeiffer BD, Luan H, Jing X, Huang YF, He Y, Schroeder MD, Kuzin A, Brody T, Zugates CT, Odenwald WF, Lee T.

Nat Neurosci. 2014 Apr;17(4):631-7. doi: 10.1038/nn.3654. Epub 2014 Feb 23.

PMID:
24561995
6.

Drosophila intermediate neural progenitors produce lineage-dependent related series of diverse neurons.

Wang YC, Yang JS, Johnston R, Ren Q, Lee YJ, Luan H, Brody T, Odenwald WF, Lee T.

Development. 2014 Jan;141(2):253-8. doi: 10.1242/dev.103069. Epub 2013 Dec 4. Erratum in: Development. 2014 Jan;141(2):488.

7.

Cis-regulatory complexity within a large non-coding region in the Drosophila genome.

Kundu M, Kuzin A, Lin TY, Lee CH, Brody T, Odenwald WF.

PLoS One. 2013 Apr 22;8(4):e60137. doi: 10.1371/journal.pone.0060137. Print 2013.

8.

Isolation and characterization of Staphylococcus aureus strains from a Paso del Norte dairy.

Matyi SA, Dupre JM, Johnson WL, Hoyt PR, White DG, Brody T, Odenwald WF, Gustafson JE.

J Dairy Sci. 2013 Jun;96(6):3535-42. doi: 10.3168/jds.2013-6590. Epub 2013 Apr 19.

9.

Unique alterations of an ultraconserved non-coding element in the 3'UTR of ZIC2 in holoprosencephaly.

Roessler E, Hu P, Hong SK, Srivastava K, Carrington B, Sood R, Petrykowska H, Elnitski L, Ribeiro LA, Richieri-Costa A, Feldman B, Odenwald WF, Muenke M.

PLoS One. 2012;7(7):e39026. doi: 10.1371/journal.pone.0039026. Epub 2012 Jul 31.

10.

The cis-regulatory dynamics of the Drosophila CNS determinant castor are controlled by multiple sub-pattern enhancers.

Kuzin A, Kundu M, Ross J, Koizumi K, Brody T, Odenwald WF.

Gene Expr Patterns. 2012 Aug-Sep;12(7-8):261-72. doi: 10.1016/j.gep.2012.05.004. Epub 2012 Jun 9.

11.

Use of a Drosophila genome-wide conserved sequence database to identify functionally related cis-regulatory enhancers.

Brody T, Yavatkar AS, Kuzin A, Kundu M, Tyson LJ, Ross J, Lin TY, Lee CH, Awasaki T, Lee T, Odenwald WF.

Dev Dyn. 2012 Jan;241(1):169-89. doi: 10.1002/dvdy.22728. Epub 2011 Aug 30.

12.

Functional analysis of conserved sequences within a temporally restricted neural precursor cell enhancer.

Kuzin A, Kundu M, Brody T, Odenwald WF.

Mech Dev. 2011 Mar-Apr;128(3-4):165-77. doi: 10.1016/j.mod.2011.02.001. Epub 2011 Feb 16.

13.

Conserved sequence block clustering and flanking inter-cluster flexibility delineate enhancers that regulate nerfin-1 expression during Drosophila CNS development.

Kuzin A, Kundu M, Ekatomatis A, Brody T, Odenwald WF.

Gene Expr Patterns. 2009 Feb;9(2):65-72. doi: 10.1016/j.gep.2008.10.005. Epub 2008 Nov 24.

14.

The neural substrate of spectral preference in Drosophila.

Gao S, Takemura SY, Ting CY, Huang S, Lu Z, Luan H, Rister J, Thum AS, Yang M, Hong ST, Wang JW, Odenwald WF, White BH, Meinertzhagen IA, Lee CH.

Neuron. 2008 Oct 23;60(2):328-42. doi: 10.1016/j.neuron.2008.08.010.

15.

Horizontal gene transfers link a human MRSA pathogen to contagious bovine mastitis bacteria.

Brody T, Yavatkar AS, Lin Y, Ross J, Kuzin A, Kundu M, Fann Y, Odenwald WF.

PLoS One. 2008 Aug 27;3(8):e3074. doi: 10.1371/journal.pone.0003074.

16.

Sequence conservation and combinatorial complexity of Drosophila neural precursor cell enhancers.

Brody T, Rasband W, Baler K, Kuzin A, Kundu M, Odenwald WF.

BMC Genomics. 2008 Aug 1;9:371. doi: 10.1186/1471-2164-9-371.

17.

Databases and Web sites for neurogenetics.

Brody T, Odenwald W.

Curr Protoc Neurosci. 2004 Sep;Appendix 5:Appendix 5B. doi: 10.1002/0471142301.nsa05bs28.

PMID:
18428593
18.

Rapid detection and curation of conserved DNA via enhanced-BLAT and EvoPrinterHD analysis.

Yavatkar AS, Lin Y, Ross J, Fann Y, Brody T, Odenwald WF.

BMC Genomics. 2008 Feb 28;9:106. doi: 10.1186/1471-2164-9-106.

19.
20.

Homeostatic mechanisms for iron storage revealed by genetic manipulations and live imaging of Drosophila ferritin.

Missirlis F, Kosmidis S, Brody T, Mavrakis M, Holmberg S, Odenwald WF, Skoulakis EM, Rouault TA.

Genetics. 2007 Sep;177(1):89-100. Epub 2007 Jul 1.

21.

cis-Decoder discovers constellations of conserved DNA sequences shared among tissue-specific enhancers.

Brody T, Rasband W, Baler K, Kuzin A, Kundu M, Odenwald WF.

Genome Biol. 2007;8(5):R75.

22.

Regulation of temporal identities during Drosophila neuroblast lineage development.

Brody T, Odenwald WF.

Curr Opin Cell Biol. 2005 Dec;17(6):672-5. Epub 2005 Oct 21. Review.

PMID:
16243502
23.

EVOPRINTER, a multigenomic comparative tool for rapid identification of functionally important DNA.

Odenwald WF, Rasband W, Kuzin A, Brody T.

Proc Natl Acad Sci U S A. 2005 Oct 11;102(41):14700-5. Epub 2005 Oct 3.

24.

Changing fates on the road to neuronal diversity.

Odenwald WF.

Dev Cell. 2005 Feb;8(2):133-4.

25.

Nerfin-1 is required for early axon guidance decisions in the developing Drosophila CNS.

Kuzin A, Brody T, Moore AW, Odenwald WF.

Dev Biol. 2005 Jan 15;277(2):347-65.

26.

Drosophila homeodomain protein Nkx6 coordinates motoneuron subtype identity and axonogenesis.

Broihier HT, Kuzin A, Zhu Y, Odenwald W, Skeath JB.

Development. 2004 Nov;131(21):5233-42. Epub 2004 Sep 29.

27.

The basic helix-loop-helix leucine zipper transcription factor Mitf is conserved in Drosophila and functions in eye development.

Hallsson JH, Haflidadóttir BS, Stivers C, Odenwald W, Arnheiter H, Pignoni F, Steingrímsson E.

Genetics. 2004 May;167(1):233-41.

28.

Mutations that affect the ability of the vnd/NK-2 homeoprotein to regulate gene expression: transgenic alterations and tertiary structure.

Koizumi K, Lintas C, Nirenberg M, Maeng JS, Ju JH, Mack JW, Gruschus JM, Odenwald WF, Ferretti JA.

Proc Natl Acad Sci U S A. 2003 Mar 18;100(6):3119-24. Epub 2003 Mar 7.

29.

Cellular diversity in the developing nervous system: a temporal view from Drosophila.

Brody T, Odenwald WF.

Development. 2002 Aug;129(16):3763-70. Review.

30.
31.

Regulatory DNA required for vnd/NK-2 homeobox gene expression pattern in neuroblasts.

Shao X, Koizumi K, Nosworthy N, Tan DP, Odenwald W, Nirenberg M.

Proc Natl Acad Sci U S A. 2002 Jan 8;99(1):113-7. Epub 2001 Dec 18. Erratum in: Proc Natl Acad Sci U S A 2002 Jun 11;99(12):8458-9.

32.

A search for Drosophila neural precursor genes identifies ran.

Koizumi K, Stivers C, Brody T, Zangeneh S, Mozer B, Odenwald WF.

Dev Genes Evol. 2001 Feb;211(2):67-75.

PMID:
11455416
33.

The IA-2 gene family: homologs in Caenorhabditis elegans, Drosophila and zebrafish.

Cai T, Krause MW, Odenwald WF, Toyama R, Notkins AL.

Diabetologia. 2001 Jan;44(1):81-8.

PMID:
11206415
34.
35.
36.

Compromised HOXA5 function can limit p53 expression in human breast tumours.

Raman V, Martensen SA, Reisman D, Evron E, Odenwald WF, Jaffee E, Marks J, Sukumar S.

Nature. 2000 Jun 22;405(6789):974-8.

PMID:
10879542
37.
38.

Regulation of POU genes by castor and hunchback establishes layered compartments in the Drosophila CNS.

Kambadur R, Koizumi K, Stivers C, Nagle J, Poole SJ, Odenwald WF.

Genes Dev. 1998 Jan 15;12(2):246-60.

39.

Molecular characterization and developmental expression of a retinoid- and fatty acid-binding glycoprotein from Drosophila. A putative lipophorin.

Kutty RK, Kutty G, Kambadur R, Duncan T, Koonin EV, Rodriguez IR, Odenwald WF, Wiggert B.

J Biol Chem. 1996 Aug 23;271(34):20641-9.

40.

Pollux, a novel Drosophila adhesion molecule, belongs to a family of proteins expressed in plants, yeast, nematodes, and man.

Zhang SD, Kassis J, Olde B, Mellerick DM, Odenwald WF.

Genes Dev. 1996 May 1;10(9):1108-19.

41.

Misexpression of the white (w) gene triggers male-male courtship in Drosophila.

Zhang SD, Odenwald WF.

Proc Natl Acad Sci U S A. 1995 Jun 6;92(12):5525-9.

42.

Herpes simplex virus pathogenesis in transgenic mice is altered by the homeodomain protein Hox 1.3.

Mitchell WJ, De Santo RJ, Zhang SD, Odenwald WF, Arnheiter H.

J Virol. 1993 Aug;67(8):4484-91.

43.

castor encodes a novel zinc finger protein required for the development of a subset of CNS neurons in Drosophila.

Mellerick DM, Kassis JA, Zhang SD, Odenwald WF.

Neuron. 1992 Nov;9(5):789-803.

PMID:
1418995
44.

Altering the insertional specificity of a Drosophila transposable element.

Kassis JA, Noll E, VanSickle EP, Odenwald WF, Perrimon N.

Proc Natl Acad Sci U S A. 1992 Mar 1;89(5):1919-23.

45.

The Drosophila gene escargot encodes a zinc finger motif found in snail-related genes.

Whiteley M, Noguchi PD, Sensabaugh SM, Odenwald WF, Kassis JA.

Mech Dev. 1992 Feb;36(3):117-27.

PMID:
1571289
46.

Progressive restriction in the distribution of the Hox-1.3 homeodomain protein during embryogenesis.

Tani M, Odenwald WF, Lazzarini RA, Friedrich VL Jr.

J Neurosci Res. 1989 Dec;24(4):457-69. Review.

PMID:
2689656
47.

A major single-stranded DNA binding protein from ovaries of the frog, Xenopus laevis, is lactate dehydrogenase.

Kaiserman HB, Odenwald WF, Stowers DJ, Poll EH, Benbow RM.

Biochim Biophys Acta. 1989 Jun 1;1008(1):23-30.

PMID:
2470407
48.

Remarkable intron and exon sequence conservation in human and mouse homeobox Hox 1.3 genes.

Tournier-Lasserve E, Odenwald WF, Garbern J, Trojanowski J, Lazzarini RA.

Mol Cell Biol. 1989 May;9(5):2273-8.

49.

The Hox-1.3 homeo box protein is a sequence-specific DNA-binding phosphoprotein.

Odenwald WF, Garbern J, Arnheiter H, Tournier-Lasserve E, Lazzarini RA.

Genes Dev. 1989 Feb;3(2):158-72. Erratum in: Genes Dev 1989 Aug;3(8):1267.

50.

Differential expression of the homeobox gene Hox-1.3 in F9 embryonal carcinoma cells.

Murphy SP, Garbern J, Odenwald WF, Lazzarini RA, Linney E.

Proc Natl Acad Sci U S A. 1988 Aug;85(15):5587-91.

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