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A Systems-Based Map of Human Brain Cell-Type Enriched Genes and Malignancy-Associated Endothelial Changes.

Dusart P, Hallström BM, Renné T, Odeberg J, Uhlén M, Butler LM.

Cell Rep. 2019 Nov 5;29(6):1690-1706.e4. doi: 10.1016/j.celrep.2019.09.088.


Correlation of computed tomography with carotid plaque transcriptomes associates calcification with lesion-stabilization.

Karlöf E, Seime T, Dias N, Lengquist M, Witasp A, Almqvist H, Kronqvist M, Gådin JR, Odeberg J, Maegdefessel L, Stenvinkel P, Matic LP, Hedin U.

Atherosclerosis. 2019 Sep;288:175-185. doi: 10.1016/j.atherosclerosis.2019.05.005. Epub 2019 May 11.


A systems-approach reveals human nestin is an endothelial-enriched, angiogenesis-independent intermediate filament protein.

Dusart P, Fagerberg L, Perisic L, Civelek M, Struck E, Hedin U, Uhlén M, Trégouët DA, Renné T, Odeberg J, Butler LM.

Sci Rep. 2018 Oct 2;8(1):14668. doi: 10.1038/s41598-018-32859-4.


A novel cysteine-linked antibacterial surface coating significantly inhibits bacterial colonization of nasal silicone prongs in a phase one pre-clinical trial.

Odeberg J, Wirsén A, Norberg Å, Frie J, Printz G, Lagercrantz H, Gudmundsson GH, Agerberth B, Jonsson B.

Mater Sci Eng C Mater Biol Appl. 2018 Dec 1;93:782-789. doi: 10.1016/j.msec.2018.08.040. Epub 2018 Aug 23.


Novel Multiomics Profiling of Human Carotid Atherosclerotic Plaques and Plasma Reveals Biliverdin Reductase B as a Marker of Intraplaque Hemorrhage.

Matic LP, Jesus Iglesias M, Vesterlund M, Lengquist M, Hong MG, Saieed S, Sanchez-Rivera L, Berg M, Razuvaev A, Kronqvist M, Lund K, Caidahl K, Gillgren P, Pontén F, Uhlén M, Schwenk JM, Hansson GK, Paulsson-Berne G, Fagman E, Roy J, Hultgren R, Bergström G, Lehtiö J, Odeberg J, Hedin U.

JACC Basic Transl Sci. 2018 Aug 1;3(4):464-480. doi: 10.1016/j.jacbts.2018.04.001. eCollection 2018 Aug.


Psychological, pharmacological, and combined treatments for binge eating disorder: a systematic review and meta-analysis.

Ghaderi A, Odeberg J, Gustafsson S, Råstam M, Brolund A, Pettersson A, Parling T.

PeerJ. 2018 Jun 21;6:e5113. doi: 10.7717/peerj.5113. eCollection 2018.


Correction to: The Sydney Heart Bank: improving translational research while eliminating or reducing the use of animal models of human heart disease.

Dos Remedios CG, Lal SP, Li A, McNamara J, Keogh A, Macdonald PS, Cooke R, Ehler E, Knöll R, Marston SB, Stelzer J, Granzier H, Bezzina C, van Dijk S, De Man F, Stienen GJM, Odeberg J, Pontén F, Linke WA, van der Velden J.

Biophys Rev. 2018 Jun;10(3):941. doi: 10.1007/s12551-018-0397-4.


Management of rivaroxaban- or apixaban-associated major bleeding with prothrombin complex concentrates: a cohort study.

Majeed A, Ågren A, Holmström M, Bruzelius M, Chaireti R, Odeberg J, Hempel EL, Magnusson M, Frisk T, Schulman S.

Blood. 2017 Oct 12;130(15):1706-1712. doi: 10.1182/blood-2017-05-782060. Epub 2017 Aug 23.


The Sydney Heart Bank: improving translational research while eliminating or reducing the use of animal models of human heart disease.

Dos Remedios CG, Lal SP, Li A, McNamara J, Keogh A, Macdonald PS, Cooke R, Ehler E, Knöll R, Marston SB, Stelzer J, Granzier H, Bezzina C, van Dijk S, De Man F, Stienen GJM, Odeberg J, Pontén F, Linke WA, Linke W, van der Velden J.

Biophys Rev. 2017 Aug;9(4):431-441. doi: 10.1007/s12551-017-0305-3. Epub 2017 Aug 14. Review. Erratum in: Biophys Rev. 2018 Feb 1;:. Linke W [corrected to Linke WA].


Instruments for the assessment of suicide risk: A systematic review evaluating the certainty of the evidence.

Runeson B, Odeberg J, Pettersson A, Edbom T, Jildevik Adamsson I, Waern M.

PLoS One. 2017 Jul 19;12(7):e0180292. doi: 10.1371/journal.pone.0180292. eCollection 2017. Review.


Whole blood ristocetin-activated platelet impedance aggregometry (Multiplate) for the rapid detection of Von Willebrand disease.

Schmidt DE, Bruzelius M, Majeed A, Odeberg J, Holmström M, Ågren A.

Thromb Haemost. 2017 Jul 26;117(8):1528-1533. doi: 10.1160/TH17-02-0129. Epub 2017 Jul 6.


A prospective diagnostic accuracy study evaluating rotational thromboelastometry and thromboelastography in 100 patients with von Willebrand disease.

Schmidt DE, Majeed A, Bruzelius M, Odeberg J, Holmström M, Ågren A.

Haemophilia. 2017 Mar;23(2):309-318. doi: 10.1111/hae.13121. Epub 2016 Oct 26.


PDGFB, a new candidate plasma biomarker for venous thromboembolism: results from the VEREMA affinity proteomics study.

Bruzelius M, Iglesias MJ, Hong MG, Sanchez-Rivera L, Gyorgy B, Souto JC, Frånberg M, Fredolini C, Strawbridge RJ, Holmström M, Hamsten A, Uhlén M, Silveira A, Soria JM, Smadja DM, Butler LM, Schwenk JM, Morange PE, Trégouët DA, Odeberg J.

Blood. 2016 Dec 8;128(23):e59-e66. Epub 2016 Oct 14.


Analysis of Body-wide Unfractionated Tissue Data to Identify a Core Human Endothelial Transcriptome.

Butler LM, Hallström BM, Fagerberg L, Pontén F, Uhlén M, Renné T, Odeberg J.

Cell Syst. 2016 Sep 28;3(3):287-301.e3. doi: 10.1016/j.cels.2016.08.001. Epub 2016 Sep 15.


Phenotypic Modulation of Smooth Muscle Cells in Atherosclerosis Is Associated With Downregulation of LMOD1, SYNPO2, PDLIM7, PLN, and SYNM.

Perisic Matic L, Rykaczewska U, Razuvaev A, Sabater-Lleal M, Lengquist M, Miller CL, Ericsson I, Röhl S, Kronqvist M, Aldi S, Magné J, Paloschi V, Vesterlund M, Li Y, Jin H, Diez MG, Roy J, Baldassarre D, Veglia F, Humphries SE, de Faire U, Tremoli E, Odeberg J, Vukojević V, Lehtiö J, Maegdefessel L, Ehrenborg E, Paulsson-Berne G, Hansson GK, Lindeman JH, Eriksson P, Quertermous T, Hamsten A, Hedin U.

Arterioscler Thromb Vasc Biol. 2016 Sep;36(9):1947-61. doi: 10.1161/ATVBAHA.116.307893. Epub 2016 Jul 28.


Tissue microarray profiling in human heart failure.

Lal S, Nguyen L, Tezone R, Ponten F, Odeberg J, Li A, Dos Remedios C.

Proteomics. 2016 Sep;16(17):2319-26. doi: 10.1002/pmic.201600135. Epub 2016 Aug 11.


GeneiASE: Detection of condition-dependent and static allele-specific expression from RNA-seq data without haplotype information.

Edsgärd D, Iglesias MJ, Reilly SJ, Hamsten A, Tornvall P, Odeberg J, Emanuelsson O.

Sci Rep. 2016 Feb 18;6:21134. doi: 10.1038/srep21134.


Cardiovascular disease and mortality after a first episode of venous thromboembolism in young and middle-aged women.

Ljungqvist M, Holmström M, Kieler H, Odeberg J, Lärfars G.

Thromb Res. 2016 Feb;138:80-85. doi: 10.1016/j.thromres.2015.11.039. Epub 2015 Dec 2.


Influence of pre-existing inflammation on the outcome of acute coronary syndrome: a cross-sectional study.

Odeberg J, Freitag M, Forssell H, Vaara I, Persson ML, Odeberg H, Halling A, Råstam L, Lindblad U.

BMJ Open. 2016 Jan 12;6(1):e009968. doi: 10.1136/bmjopen-2015-009968.


Gene expression signatures, pathways and networks in carotid atherosclerosis.

Perisic L, Aldi S, Sun Y, Folkersen L, Razuvaev A, Roy J, Lengquist M, Åkesson S, Wheelock CE, Maegdefessel L, Gabrielsen A, Odeberg J, Hansson GK, Paulsson-Berne G, Hedin U.

J Intern Med. 2016 Mar;279(3):293-308. doi: 10.1111/joim.12448. Epub 2015 Nov 30.


F11 is associated with recurrent VTE in women. A prospective cohort study.

Bruzelius M, Ljungqvist M, Bottai M, Bergendal A, Strawbridge RJ, Holmström M, Silveira A, Kieler H, Hamsten A, Lärfars G, Odeberg J.

Thromb Haemost. 2016 Jan;115(2):406-14. doi: 10.1160/TH15-06-0459. Epub 2015 Oct 1.


Poor survival in glioblastoma patients is associated with early signs of immunosenescence in the CD4 T-cell compartment after surgery.

Fornara O, Odeberg J, Wolmer Solberg N, Tammik C, Skarman P, Peredo I, Stragliotto G, Rahbar A, Söderberg-Nauclér C.

Oncoimmunology. 2015 Jun 5;4(9):e1036211. eCollection 2015 Sep.


Cytomegalovirus infection induces a stem cell phenotype in human primary glioblastoma cells: prognostic significance and biological impact.

Fornara O, Bartek J Jr, Rahbar A, Odeberg J, Khan Z, Peredo I, Hamerlik P, Bartek J, Stragliotto G, Landázuri N, Söderberg-Nauclér C.

Cell Death Differ. 2016 Feb;23(2):261-9. doi: 10.1038/cdd.2015.91. Epub 2015 Jul 3.


The effect of conservative treatment of urinary incontinence among older and frail older people: a systematic review.

Stenzelius K, Molander U, Odeberg J, Hammarström M, Franzen K, Midlöv P, Samuelsson E, Andersson G.

Age Ageing. 2015 Sep;44(5):736-44. doi: 10.1093/ageing/afv070. Epub 2015 Jun 25. Review.


Effect of pharmacological treatment for urinary incontinence in the elderly and frail elderly: A systematic review.

Samuelsson E, Odeberg J, Stenzelius K, Molander U, Hammarström M, Franzen K, Andersson G, Midlöv P.

Geriatr Gerontol Int. 2015 May;15(5):521-34. doi: 10.1111/ggi.12451. Epub 2015 Feb 5. Review.


Proteomics. Tissue-based map of the human proteome.

Uhlén M, Fagerberg L, Hallström BM, Lindskog C, Oksvold P, Mardinoglu A, Sivertsson Å, Kampf C, Sjöstedt E, Asplund A, Olsson I, Edlund K, Lundberg E, Navani S, Szigyarto CA, Odeberg J, Djureinovic D, Takanen JO, Hober S, Alm T, Edqvist PH, Berling H, Tegel H, Mulder J, Rockberg J, Nilsson P, Schwenk JM, Hamsten M, von Feilitzen K, Forsberg M, Persson L, Johansson F, Zwahlen M, von Heijne G, Nielsen J, Pontén F.

Science. 2015 Jan 23;347(6220):1260419. doi: 10.1126/science.1260419.


The kidney transcriptome and proteome defined by transcriptomics and antibody-based profiling.

Habuka M, Fagerberg L, Hallström BM, Kampf C, Edlund K, Sivertsson Å, Yamamoto T, Pontén F, Uhlén M, Odeberg J.

PLoS One. 2014 Dec 31;9(12):e116125. doi: 10.1371/journal.pone.0116125. eCollection 2014.


Surgery for urinary incontinence in women 65 years and older: a systematic review.

Franzen K, Andersson G, Odeberg J, Midlöv P, Samuelsson E, Stenzelius K, Hammarström M.

Int Urogynecol J. 2015 Aug;26(8):1095-102. doi: 10.1007/s00192-014-2573-9. Epub 2014 Dec 5. Review.


Predicting venous thrombosis in women using a combination of genetic markers and clinical risk factors.

Bruzelius M, Bottai M, Sabater-Lleal M, Strawbridge RJ, Bergendal A, Silveira A, Sundström A, Kieler H, Hamsten A, Odeberg J.

J Thromb Haemost. 2015 Feb;13(2):219-27. doi: 10.1111/jth.12808. Epub 2015 Jan 12.


Association of venous thromboembolism with hormonal contraception and thrombophilic genotypes.

Bergendal A, Persson I, Odeberg J, Sundström A, Holmström M, Schulman S, Björgell O, Kieler H.

Obstet Gynecol. 2014 Sep;124(3):600-9. doi: 10.1097/AOG.0000000000000411. Erratum in: Obstet Gynecol. 2015 Feb;125(2):495.


The influence of smoking and impaired glucose homoeostasis on the outcome in patients presenting with an acute coronary syndrome: a cross-sectional study.

Odeberg J, Freitag M, Forssell H, Vaara I, Persson ML, Odeberg H, Halling A, Råstam L, Lindblad U.

BMJ Open. 2014 Jul 3;4(7):e005077. doi: 10.1136/bmjopen-2014-005077.


[Urinary incontinence in the elderly can be treated--lack of knowledge about frail elderly].

Hammarström M, Odeberg J.

Lakartidningen. 2014 May 14-20;111(20):876-8. Swedish. No abstract available.


Influence of coronary artery disease-associated genetic variants on risk of venous thromboembolism.

Bruzelius M, Strawbridge RJ, Trégouët DA, Wiggins KL, Gertow K, Sabater-Lleal M, Öhrvik J, Bergendal A, Silveira A, Sundström A, Kieler H, Syvänen AC, Smith NL, Morange PE, Odeberg J, Hamsten A.

Thromb Res. 2014 Aug;134(2):426-32. doi: 10.1016/j.thromres.2014.03.054. Epub 2014 Apr 4.


Molecular- and organelle-based predictive paradigm underlying recovery by left ventricular assist device support.

Liem DA, Nsair A, Setty SP, Cadeiras M, Wang D, Maclellan R, Lotz C, Lin AJ, Tabaraki J, Li H, Ge J, Odeberg J, Ponten F, Larson E, Mulder J, Lundberg E, Weiss JN, Uhlen M, Ping P, Deng MC.

Circ Heart Fail. 2014 Mar 1;7(2):359-66. doi: 10.1161/CIRCHEARTFAILURE.113.000250. Review. No abstract available.


[Birth control pills, surgery and casting leads to high risk of venous thrombosis in women. Better prophylaxis is needed for surgical procedures, as shown in case-control study].

Kieler H, Persson I, Sundström A, Hedenmalm K, Odeberg J, Bergendal A.

Lakartidningen. 2013 Dec 4-17;110(49-50):2233-7. Swedish. No abstract available.


Neuroprotective effects of human spinal cord-derived neural precursor cells after transplantation to the injured spinal cord.

Emgård M, Piao J, Aineskog H, Liu J, Calzarossa C, Odeberg J, Holmberg L, Samuelsson EB, Bezubik B, Vincent PH, Falci SP, Seiger Å, Åkesson E, Sundström E.

Exp Neurol. 2014 Mar;253:138-45. doi: 10.1016/j.expneurol.2013.12.022. Epub 2014 Jan 8.


Analysis of the human tissue-specific expression by genome-wide integration of transcriptomics and antibody-based proteomics.

Fagerberg L, Hallström BM, Oksvold P, Kampf C, Djureinovic D, Odeberg J, Habuka M, Tahmasebpoor S, Danielsson A, Edlund K, Asplund A, Sjöstedt E, Lundberg E, Szigyarto CA, Skogs M, Takanen JO, Berling H, Tegel H, Mulder J, Nilsson P, Schwenk JM, Lindskog C, Danielsson F, Mardinoglu A, Sivertsson A, von Feilitzen K, Forsberg M, Zwahlen M, Olsson I, Navani S, Huss M, Nielsen J, Ponten F, Uhlén M.

Mol Cell Proteomics. 2014 Feb;13(2):397-406. doi: 10.1074/mcp.M113.035600. Epub 2013 Dec 5.


Integration of cardiac proteome biology and medicine by a specialized knowledgebase.

Zong NC, Li H, Li H, Lam MP, Jimenez RC, Kim CS, Deng N, Kim AK, Choi JH, Zelaya I, Liem D, Meyer D, Odeberg J, Fang C, Lu HJ, Xu T, Weiss J, Duan H, Uhlen M, Yates JR 3rd, Apweiler R, Ge J, Hermjakob H, Ping P.

Circ Res. 2013 Oct 12;113(9):1043-53. doi: 10.1161/CIRCRESAHA.113.301151. Epub 2013 Aug 21.


Profiling of atherosclerotic lesions by gene and tissue microarrays reveals PCSK6 as a novel protease in unstable carotid atherosclerosis.

Perisic L, Hedin E, Razuvaev A, Lengquist M, Osterholm C, Folkersen L, Gillgren P, Paulsson-Berne G, Ponten F, Odeberg J, Hedin U.

Arterioscler Thromb Vasc Biol. 2013 Oct;33(10):2432-43. doi: 10.1161/ATVBAHA.113.301743. Epub 2013 Aug 1.


Heart research advances using database search engines, Human Protein Atlas and the Sydney Heart Bank.

Li A, Estigoy C, Raftery M, Cameron D, Odeberg J, Pontén F, Lal S, Dos Remedios CG.

Heart Lung Circ. 2013 Oct;22(10):819-26. doi: 10.1016/j.hlc.2013.06.006. Epub 2013 Jul 13. Review.


Frequent detection of human cytomegalovirus in neuroblastoma: a novel therapeutic target?

Wolmer-Solberg N, Baryawno N, Rahbar A, Fuchs D, Odeberg J, Taher C, Wilhelmi V, Milosevic J, Mohammad AA, Martinsson T, Sveinbjörnsson B, Johnsen JI, Kogner P, Söderberg-Nauclér C.

Int J Cancer. 2013 Nov 15;133(10):2351-61. doi: 10.1002/ijc.28265. Epub 2013 Jul 13.


Profiling post-centrifugation delay of serum and plasma with antibody bead arrays.

Qundos U, Hong MG, Tybring G, Divers M, Odeberg J, Uhlen M, Nilsson P, Schwenk JM.

J Proteomics. 2013 Dec 16;95:46-54. doi: 10.1016/j.jprot.2013.04.020. Epub 2013 Apr 28.


Human cytomegalovirus particles directly suppress CD4 T-lymphocyte activation and proliferation.

Fornara O, Odeberg J, Khan Z, Stragliotto G, Peredo I, Butler L, Söderberg-Nauclér C.

Immunobiology. 2013 Aug;218(8):1034-40. doi: 10.1016/j.imbio.2013.01.002. Epub 2013 Jan 16.


Contribution of antibody-based protein profiling to the human Chromosome-centric Proteome Project (C-HPP).

Fagerberg L, Oksvold P, Skogs M, Algenäs C, Lundberg E, Pontén F, Sivertsson A, Odeberg J, Klevebring D, Kampf C, Asplund A, Sjöstedt E, Al-Khalili Szigyarto C, Edqvist PH, Olsson I, Rydberg U, Hudson P, Ottosson Takanen J, Berling H, Björling L, Tegel H, Rockberg J, Nilsson P, Navani S, Jirström K, Mulder J, Schwenk JM, Zwahlen M, Hober S, Forsberg M, von Feilitzen K, Uhlén M.

J Proteome Res. 2013 Jun 7;12(6):2439-48. doi: 10.1021/pr300924j. Epub 2012 Dec 31.


Risk factors for venous thromboembolism in pre-and postmenopausal women.

Bergendal A, Bremme K, Hedenmalm K, Lärfars G, Odeberg J, Persson I, Sundström A, Kieler H.

Thromb Res. 2012 Oct;130(4):596-601. doi: 10.1016/j.thromres.2012.05.024. Epub 2012 Jun 14.


A genome-wide association study identifies KNG1 as a genetic determinant of plasma factor XI Level and activated partial thromboplastin time.

Sabater-Lleal M, Martinez-Perez A, Buil A, Folkersen L, Souto JC, Bruzelius M, Borrell M, Odeberg J, Silveira A, Eriksson P, Almasy L, Hamsten A, Soria JM.

Arterioscler Thromb Vasc Biol. 2012 Aug;32(8):2008-16. doi: 10.1161/ATVBAHA.112.248492. Epub 2012 Jun 14.


Combined chromatin and expression analysis reveals specific regulatory mechanisms within cytokine genes in the macrophage early immune response.

Iglesias MJ, Reilly SJ, Emanuelsson O, Sennblad B, Pirmoradian Najafabadi M, Folkersen L, Mälarstig A, Lagergren J, Eriksson P, Hamsten A, Odeberg J.

PLoS One. 2012;7(2):e32306. doi: 10.1371/journal.pone.0032306. Epub 2012 Feb 27. Erratum in: PLoS One. 2012;7(4): doi/10.1371/annotation/689ae222-9eb1-4f80-8ebe-6b80e8ad45ce. Jesus Iglesias, Maria [corrected to Iglesias, Maria Jesus].


A case series of five episodes of massive LMWH non-fatal self-induced overdose in a single patient.

Odeberg J, Carlsson A, Hällsjö-Sander C, Agren A.

Thromb Res. 2012 May;129(5):668-70. doi: 10.1016/j.thromres.2011.12.033. Epub 2012 Jan 18. No abstract available.


Antibody-based protein profiling of the human chromosome 21.

Uhlén M, Oksvold P, Älgenäs C, Hamsten C, Fagerberg L, Klevebring D, Lundberg E, Odeberg J, Pontén F, Kondo T, Sivertsson Å.

Mol Cell Proteomics. 2012 Mar;11(3):M111.013458. doi: 10.1074/mcp.M111.013458. Epub 2011 Oct 31.


Detection of human cytomegalovirus in medulloblastomas reveals a potential therapeutic target.

Baryawno N, Rahbar A, Wolmer-Solberg N, Taher C, Odeberg J, Darabi A, Khan Z, Sveinbjörnsson B, FuskevÅg OM, Segerström L, Nordenskjöld M, Siesjö P, Kogner P, Johnsen JI, Söderberg-Nauclér C.

J Clin Invest. 2011 Oct;121(10):4043-55. doi: 10.1172/JCI57147. Epub 2011 Sep 26.

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