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Items: 31

1.

Failure is not an option - mitochondrial genome segregation in trypanosomes.

Schneider A, Ochsenreiter T.

J Cell Sci. 2018 Sep 17;131(18). pii: jcs221820. doi: 10.1242/jcs.221820. Review.

PMID:
30224426
2.

Distinct 3' UTRs regulate the life-cycle-specific expression of two TCTP paralogs in Trypanosoma brucei.

Jojic B, Amodeo S, Bregy I, Ochsenreiter T.

J Cell Sci. 2018 May 10;131(9). pii: jcs206417. doi: 10.1242/jcs.206417.

3.

Characterization of the novel mitochondrial genome replication factor MiRF172 in Trypanosoma brucei.

Amodeo S, Jakob M, Ochsenreiter T.

J Cell Sci. 2018 Apr 25;131(8). pii: jcs211730. doi: 10.1242/jcs.211730.

4.

Molecular model of the mitochondrial genome segregation machinery in Trypanosoma brucei.

Hoffmann A, Käser S, Jakob M, Amodeo S, Peitsch C, Týč J, Vaughan S, Zuber B, Schneider A, Ochsenreiter T.

Proc Natl Acad Sci U S A. 2018 Feb 20;115(8):E1809-E1818. doi: 10.1073/pnas.1716582115. Epub 2018 Feb 6.

5.

Correction for Ekanayake et al., "Epigenetic Regulation of Transcription and Virulence in Trypanosoma cruzi by O-Linked Thymine Glucosylation of DNA".

Ekanayake DK, Minning T, Weatherly B, Gunasekera K, Nilsson D, Tarleton R, Ochsenreiter T, Sabatini R.

Mol Cell Biol. 2017 Jul 14;37(15). pii: e00239-17. doi: 10.1128/MCB.00239-17. Print 2017 Aug 1. No abstract available.

6.

A novel component of the mitochondrial genome segregation machinery in trypanosomes.

Hoffmann A, Jakob M, Ochsenreiter T.

Microb Cell. 2016 Jul 28;3(8):352-354. doi: 10.15698/mic2016.08.519.

7.

The nuclear RNA binding protein RBP33 influences mRNA and spliced leader RNA abundance in Trypanosoma brucei.

Cirovic O, Trikin R, Hoffmann A, Doiron N, Jakob M, Ochsenreiter T.

Mol Biochem Parasitol. 2017 Mar;212:16-20. doi: 10.1016/j.molbiopara.2016.12.008. Epub 2017 Jan 6.

PMID:
28069429
8.

Mitochondrial growth during the cell cycle of Trypanosoma brucei bloodstream forms.

Jakob M, Hoffmann A, Amodeo S, Peitsch C, Zuber B, Ochsenreiter T.

Sci Rep. 2016 Nov 22;6:36565. doi: 10.1038/srep36565.

9.

Correction: TAC102 Is a Novel Component of the Mitochondrial Genome Segregation Machinery in Trypanosomes.

Trikin R, Doiron N, Hoffmann A, Haenni B, Jakob M, Schnaufer A, Schimanski B, Zuber B, Ochsenreiter T.

PLoS Pathog. 2016 Jul 1;12(7):e1005750. doi: 10.1371/journal.ppat.1005750. eCollection 2016 Jul.

10.

TAC102 Is a Novel Component of the Mitochondrial Genome Segregation Machinery in Trypanosomes.

Trikin R, Doiron N, Hoffmann A, Haenni B, Jakob M, Schnaufer A, Schimanski B, Zuber B, Ochsenreiter T.

PLoS Pathog. 2016 May 11;12(5):e1005586. doi: 10.1371/journal.ppat.1005586. eCollection 2016 May. Erratum in: PLoS Pathog. 2016 Jul;12(7):e1005750.

11.

Trypanosoma brucei RRM1 is a nuclear RNA-binding protein and modulator of chromatin structure.

Naguleswaran A, Gunasekera K, Schimanski B, Heller M, Hemphill A, Ochsenreiter T, Roditi I.

MBio. 2015 Mar 17;6(2):e00114. doi: 10.1128/mBio.00114-15.

12.
13.

Trypanosomal TAC40 constitutes a novel subclass of mitochondrial β-barrel proteins specialized in mitochondrial genome inheritance.

Schnarwiler F, Niemann M, Doiron N, Harsman A, Käser S, Mani J, Chanfon A, Dewar CE, Oeljeklaus S, Jackson CB, Pusnik M, Schmidt O, Meisinger C, Hiller S, Warscheid B, Schnaufer AC, Ochsenreiter T, Schneider A.

Proc Natl Acad Sci U S A. 2014 May 27;111(21):7624-9. doi: 10.1073/pnas.1404854111. Epub 2014 May 12.

14.

Genome profiling of sterol synthesis shows convergent evolution in parasites and guides chemotherapeutic attack.

Fügi MA, Gunasekera K, Ochsenreiter T, Guan X, Wenk MR, Mäser P.

J Lipid Res. 2014 May;55(5):929-38. doi: 10.1194/jlr.M048017. Epub 2014 Mar 13.

15.

Proteome remodelling during development from blood to insect-form Trypanosoma brucei quantified by SILAC and mass spectrometry.

Gunasekera K, Wüthrich D, Braga-Lagache S, Heller M, Ochsenreiter T.

BMC Genomics. 2012 Oct 16;13:556. doi: 10.1186/1471-2164-13-556.

16.

Dual targeting of isoleucyl-tRNA synthetase in Trypanosoma brucei is mediated through alternative trans-splicing.

Rettig J, Wang Y, Schneider A, Ochsenreiter T.

Nucleic Acids Res. 2012 Feb;40(3):1299-306. doi: 10.1093/nar/gkr794. Epub 2011 Oct 5.

17.

Gene expression in Trypanosoma brucei: lessons from high-throughput RNA sequencing.

Siegel TN, Gunasekera K, Cross GA, Ochsenreiter T.

Trends Parasitol. 2011 Oct;27(10):434-41. doi: 10.1016/j.pt.2011.05.006. Epub 2011 Jul 6. Review.

18.

Epigenetic regulation of transcription and virulence in Trypanosoma cruzi by O-linked thymine glucosylation of DNA.

Ekanayake DK, Minning T, Weatherly B, Gunasekera K, Nilsson D, Tarleton R, Ochsenreiter T, Sabatini R.

Mol Cell Biol. 2011 Apr;31(8):1690-700. doi: 10.1128/MCB.01277-10. Epub 2011 Feb 14. Erratum in: Mol Cell Biol. 2017 Jul 14;37(15):.

19.

Spliced leader trapping reveals widespread alternative splicing patterns in the highly dynamic transcriptome of Trypanosoma brucei.

Nilsson D, Gunasekera K, Mani J, Osteras M, Farinelli L, Baerlocher L, Roditi I, Ochsenreiter T.

PLoS Pathog. 2010 Aug 5;6(8):e1001037. doi: 10.1371/journal.ppat.1001037.

20.

The Trypanosoma brucei MitoCarta and its regulation and splicing pattern during development.

Zhang X, Cui J, Nilsson D, Gunasekera K, Chanfon A, Song X, Wang H, Xu Y, Ochsenreiter T.

Nucleic Acids Res. 2010 Nov;38(21):7378-87. doi: 10.1093/nar/gkq618. Epub 2010 Jul 26.

21.

RNA editing in kinetoplastids.

Hajduk S, Ochsenreiter T.

RNA Biol. 2010 Mar-Apr;7(2):229-36. Epub 2010 Mar 1.

PMID:
20220308
22.

Alternative RNA editing produces a novel protein involved in mitochondrial DNA maintenance in trypanosomes.

Ochsenreiter T, Anderson S, Wood ZA, Hajduk SL.

Mol Cell Biol. 2008 Sep;28(18):5595-604. doi: 10.1128/MCB.00637-08. Epub 2008 Jul 7.

23.

Alternative mRNA editing in trypanosomes is extensive and may contribute to mitochondrial protein diversity.

Ochsenreiter T, Cipriano M, Hajduk SL.

PLoS One. 2008 Feb 13;3(2):e1566. doi: 10.1371/journal.pone.0001566.

24.

KISS: the kinetoplastid RNA editing sequence search tool.

Ochsenreiter T, Cipriano M, Hajduk SL.

RNA. 2007 Jan;13(1):1-4. Epub 2006 Nov 22.

25.
26.

Characterization of large-insert DNA libraries from soil for environmental genomic studies of Archaea.

Treusch AH, Kletzin A, Raddatz G, Ochsenreiter T, Quaiser A, Meurer G, Schuster SC, Schleper C.

Environ Microbiol. 2004 Sep;6(9):970-80.

PMID:
15305922
27.

Phylogenomics of hyperthermophilic Archaea and Bacteria.

Klenk HP, Spitzer M, Ochsenreiter T, Fuellen G.

Biochem Soc Trans. 2004 Apr;32(Pt 2):175-8. Review.

PMID:
15046566
28.

Acidobacteria form a coherent but highly diverse group within the bacterial domain: evidence from environmental genomics.

Quaiser A, Ochsenreiter T, Lanz C, Schuster SC, Treusch AH, Eck J, Schleper C.

Mol Microbiol. 2003 Oct;50(2):563-75.

29.

Diversity and abundance of Crenarchaeota in terrestrial habitats studied by 16S RNA surveys and real time PCR.

Ochsenreiter T, Selezi D, Quaiser A, Bonch-Osmolovskaya L, Schleper C.

Environ Microbiol. 2003 Sep;5(9):787-97.

PMID:
12919414
30.

First insight into the genome of an uncultivated crenarchaeote from soil.

Quaiser A, Ochsenreiter T, Klenk HP, Kletzin A, Treusch AH, Meurer G, Eck J, Sensen CW, Schleper C.

Environ Microbiol. 2002 Oct;4(10):603-11.

PMID:
12366755
31.

Diversity of Archaea in hypersaline environments characterized by molecular-phylogenetic and cultivation studies.

Ochsenreiter T, Pfeifer F, Schleper C.

Extremophiles. 2002 Aug;6(4):267-74. Epub 2002 Mar 9.

PMID:
12215811

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