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Modelling brain development to detect white matter injury in term and preterm born neonates.

O'Muircheartaigh J, Robinson E, Pietsch M, Wolfers T, Aljabar P, Grande LC, Teixeira RP, Bozek J, Schuh A, Makropoulos A, Batalle D, Hutter J, Vecchiato K, Steinweg JK, Fitzgibbon S, Hughes E, Price A, Marquand A, Reuckert D, Rutherford M, Hajnal J, Counsell SJ, Edwards D.

Brain. 2020 Jan 16. pii: awz412. doi: 10.1093/brain/awz412. [Epub ahead of print]


Motion-corrected MRI with DISORDER: Distributed and incoherent sample orders for reconstruction deblurring using encoding redundancy.

Cordero-Grande L, Ferrazzi G, Teixeira RPAG, O'Muircheartaigh J, Price AN, Hajnal JV.

Magn Reson Med. 2020 Jan 3. doi: 10.1002/mrm.28157. [Epub ahead of print]


The heterogeneous functional architecture of the posteromedial cortex is associated with selective functional connectivity differences in Alzheimer's disease.

Khan W, Amad A, Giampietro V, Werden E, De Simoni S, O'Muircheartaigh J, Westman E, O'Daly O, Williams SCR, Brodtmann A; Alzheimer's Disease Neuroimaging Initiative.

Hum Brain Mapp. 2019 Dec 19. doi: 10.1002/hbm.24894. [Epub ahead of print]


Perfusion and apparent oxygenation in the human placenta (PERFOX).

Hutter J, Harteveld AA, Jackson LH, Franklin S, Bos C, van Osch MJP, O'Muircheartaigh J, Ho A, Chappell L, Hajnal JV, Rutherford M, De Vita E.

Magn Reson Med. 2020 Feb;83(2):549-560. doi: 10.1002/mrm.27950. Epub 2019 Aug 21.


From pattern classification to stratification: towards conceptualizing the heterogeneity of Autism Spectrum Disorder.

Wolfers T, Floris DL, Dinga R, van Rooij D, Isakoglou C, Kia SM, Zabihi M, Llera A, Chowdanayaka R, Kumar VJ, Peng H, Laidi C, Batalle D, Dimitrova R, Charman T, Loth E, Lai MC, Jones E, Baumeister S, Moessnang C, Banaschewski T, Ecker C, Dumas G, O'Muircheartaigh J, Murphy D, Buitelaar JK, Marquand AF, Beckmann CF.

Neurosci Biobehav Rev. 2019 Sep;104:240-254. doi: 10.1016/j.neubiorev.2019.07.010. Epub 2019 Jul 19. Review.


Social Brain Functional Maturation in Newborn Infants With and Without a Family History of Autism Spectrum Disorder.

Ciarrusta J, O'Muircheartaigh J, Dimitrova R, Batalle D, Cordero-Grande L, Price A, Hughes E, Steinweg JK, Kangas J, Perry E, Javed A, Stoencheva V, Akolekar R, Victor S, Hajnal J, Murphy D, Edwards D, Arichi T, McAlonan G.

JAMA Netw Open. 2019 Apr 5;2(4):e191868. doi: 10.1001/jamanetworkopen.2019.1868.


Abnormal Microstructural Development of the Cerebral Cortex in Neonates With Congenital Heart Disease Is Associated With Impaired Cerebral Oxygen Delivery.

Kelly CJ, Christiaens D, Batalle D, Makropoulos A, Cordero-Grande L, Steinweg JK, O'Muircheartaigh J, Khan H, Lee G, Victor S, Alexander DC, Zhang H, Simpson J, Hajnal JV, Edwards AD, Rutherford MA, Counsell SJ.

J Am Heart Assoc. 2019 Mar 5;8(5):e009893. doi: 10.1161/JAHA.118.009893.


Quantitative neuroimaging measures of myelin in the healthy brain and in multiple sclerosis.

O'Muircheartaigh J, Vavasour I, Ljungberg E, Li DKB, Rauscher A, Levesque V, Garren H, Clayton D, Tam R, Traboulsee A, Kolind S.

Hum Brain Mapp. 2019 May;40(7):2104-2116. doi: 10.1002/hbm.24510. Epub 2019 Jan 15.


Concurrent analysis of white matter bundles and grey matter networks in the chimpanzee.

Mars RB, O'Muircheartaigh J, Folloni D, Li L, Glasser MF, Jbabdi S, Bryant KL.

Brain Struct Funct. 2019 Apr;224(3):1021-1033. doi: 10.1007/s00429-018-1817-8. Epub 2018 Dec 19.


Myelin water fraction changes in febrile seizures.

Moldovan K, Boxerman JL, O'Muircheartaigh J, Dean D, Eyerly-Webb S, Cosgrove GR, Pucci FG, Deoni SCL, Spader HS.

Clin Neurol Neurosurg. 2018 Dec;175:61-67. doi: 10.1016/j.clineuro.2018.10.005. Epub 2018 Oct 10.


Multi-modal functional MRI to explore placental function over gestation.

Hutter J, Slator PJ, Jackson L, Gomes ADS, Ho A, Story L, O'Muircheartaigh J, Teixeira RPAG, Chappell LC, Alexander DC, Rutherford MA, Hajnal JV.

Magn Reson Med. 2019 Feb;81(2):1191-1204. doi: 10.1002/mrm.27447. Epub 2018 Sep 21.


Human amygdala functional network development: A cross-sectional study from 3 months to 5 years of age.

Gabard-Durnam LJ, O'Muircheartaigh J, Dirks H, Dean DC 3rd, Tottenham N, Deoni S.

Dev Cogn Neurosci. 2018 Nov;34:63-74. doi: 10.1016/j.dcn.2018.06.004. Epub 2018 Jul 21.


Construction of a neonatal cortical surface atlas using Multimodal Surface Matching in the Developing Human Connectome Project.

Bozek J, Makropoulos A, Schuh A, Fitzgibbon S, Wright R, Glasser MF, Coalson TS, O'Muircheartaigh J, Hutter J, Price AN, Cordero-Grande L, Teixeira RPAG, Hughes E, Tusor N, Baruteau KP, Rutherford MA, Edwards AD, Hajnal JV, Smith SM, Rueckert D, Jenkinson M, Robinson EC.

Neuroimage. 2018 Oct 1;179:11-29. doi: 10.1016/j.neuroimage.2018.06.018. Epub 2018 Jun 14.


Different patterns of cortical maturation before and after 38 weeks gestational age demonstrated by diffusion MRI in vivo.

Batalle D, O'Muircheartaigh J, Makropoulos A, Kelly CJ, Dimitrova R, Hughes EJ, Hajnal JV, Zhang H, Alexander DC, Edwards AD, Counsell SJ.

Neuroimage. 2019 Jan 15;185:764-775. doi: 10.1016/j.neuroimage.2018.05.046. Epub 2018 May 23.


Thalamic volume reduction in drug-naive patients with new-onset genetic generalized epilepsy.

Perani S, Tierney TM, Centeno M, Shamshiri EA, Yaakub SN, O'Muircheartaigh J, Carmichael DW, Richardson MP.

Epilepsia. 2018 Jan;59(1):226-234. doi: 10.1111/epi.13955. Epub 2017 Nov 18.


Annual Research Review: Not just a small adult brain: understanding later neurodevelopment through imaging the neonatal brain.

Batalle D, Edwards AD, O'Muircheartaigh J.

J Child Psychol Psychiatry. 2018 Apr;59(4):350-371. doi: 10.1111/jcpp.12838. Epub 2017 Nov 3. Review.


Contribution to speech development of the right anterior putamen revealed with multivariate tensor-based morphometry.

Vlasova R, Yalin Wang, Dirks H, Dean D, O'Muircheartaigh J, Gonzalez S, Binh Kien Nguyen, Nelson MD, Deoni S, Lepore N.

Conf Proc IEEE Eng Med Biol Soc. 2017 Jul;2017:3085-3087. doi: 10.1109/EMBC.2017.8037509.


Central sulcus development in early childhood.

Gajawelli N, Deoni S, Dirks H, Dean D, O'Muircheartaigh J, Yalin Wang, Nelson MD, Coulon O, Lepore N.

Conf Proc IEEE Eng Med Biol Soc. 2017 Jul;2017:161-164. doi: 10.1109/EMBC.2017.8036787.


Traveling Slow Oscillations During Sleep: A Marker of Brain Connectivity in Childhood.

Kurth S, Riedner BA, Dean DC, O'Muircheartaigh J, Huber R, Jenni OG, Deoni SCL, LeBourgeois MK.

Sleep. 2017 Sep 1;40(9). doi: 10.1093/sleep/zsx121.


Concurrent white matter bundles and grey matter networks using independent component analysis.

O'Muircheartaigh J, Jbabdi S.

Neuroimage. 2018 Apr 15;170:296-306. doi: 10.1016/j.neuroimage.2017.05.012. Epub 2017 May 14. Review.


A Novel Way to Measure and Predict Development: A Heuristic Approach to Facilitate the Early Detection of Neurodevelopmental Disorders.

Marschik PB, Pokorny FB, Peharz R, Zhang D, O'Muircheartaigh J, Roeyers H, Bölte S, Spittle AJ, Urlesberger B, Schuller B, Poustka L, Ozonoff S, Pernkopf F, Pock T, Tammimies K, Enzinger C, Krieber M, Tomantschger I, Bartl-Pokorny KD, Sigafoos J, Roche L, Esposito G, Gugatschka M, Nielsen-Saines K, Einspieler C, Kaufmann WE; BEE-PRI Study Group.

Curr Neurol Neurosci Rep. 2017 May;17(5):43. doi: 10.1007/s11910-017-0748-8. Review.


Putamen Development in Children 12 to 21 Months Old.

Vlasova R, Gajawelli N, Wang Y, Dirks H, Dean D, O'Muircheartaigh J, Lao Y, Yoon J, Nelson MD, Deoni S, Lepore N.

Proc SPIE Int Soc Opt Eng. 2016 Dec;10160. pii: 101600E. doi: 10.1117/12.2257278. Epub 2017 Jan 26.


Increased Sleep Depth in Developing Neural Networks: New Insights from Sleep Restriction in Children.

Kurth S, Dean DC 3rd, Achermann P, O'Muircheartaigh J, Huber R, Deoni SC, LeBourgeois MK.

Front Hum Neurosci. 2016 Sep 21;10:456. eCollection 2016.


Mapping an index of the myelin g-ratio in infants using magnetic resonance imaging.

Dean DC 3rd, O'Muircheartaigh J, Dirks H, Travers BG, Adluru N, Alexander AL, Deoni SCL.

Neuroimage. 2016 May 15;132:225-237. doi: 10.1016/j.neuroimage.2016.02.040. Epub 2016 Feb 22.


Characterization of the central sulcus in the brain in early childhood.

Gajawelli N, Deoni S, Dirks H, Dean D, O'Muircheartaigh J, Sawardekar S, Ezis A, Wang Y, Nelson MD, Coulon O, Lepore N.

Conf Proc IEEE Eng Med Biol Soc. 2015;2015:149-52. doi: 10.1109/EMBC.2015.7318322.


Examining the relationships between cortical maturation and white matter myelination throughout early childhood.

Croteau-Chonka EC, Dean DC 3rd, Remer J, Dirks H, O'Muircheartaigh J, Deoni SCL.

Neuroimage. 2016 Jan 15;125:413-421. doi: 10.1016/j.neuroimage.2015.10.038. Epub 2015 Oct 21.


Myelination Is Associated with Processing Speed in Early Childhood: Preliminary Insights.

Chevalier N, Kurth S, Doucette MR, Wiseheart M, Deoni SC, Dean DC 3rd, O'Muircheartaigh J, Blackwell KA, Munakata Y, LeBourgeois MK.

PLoS One. 2015 Oct 6;10(10):e0139897. doi: 10.1371/journal.pone.0139897. eCollection 2015.


Cortical maturation and myelination in healthy toddlers and young children.

Deoni SC, Dean DC 3rd, Remer J, Dirks H, O'Muircheartaigh J.

Neuroimage. 2015 Jul 15;115:147-61. doi: 10.1016/j.neuroimage.2015.04.058. Epub 2015 May 2.


Specialization and integration of functional thalamocortical connectivity in the human infant.

Toulmin H, Beckmann CF, O'Muircheartaigh J, Ball G, Nongena P, Makropoulos A, Ederies A, Counsell SJ, Kennea N, Arichi T, Tusor N, Rutherford MA, Azzopardi D, Gonzalez-Cinca N, Hajnal JV, Edwards AD.

Proc Natl Acad Sci U S A. 2015 May 19;112(20):6485-90. doi: 10.1073/pnas.1422638112. Epub 2015 May 4.


White Matter Connectivity of the Thalamus Delineates the Functional Architecture of Competing Thalamocortical Systems.

O'Muircheartaigh J, Keller SS, Barker GJ, Richardson MP.

Cereb Cortex. 2015 Nov;25(11):4477-89. doi: 10.1093/cercor/bhv063. Epub 2015 Apr 21.


Morphometric MRI alterations and postoperative seizure control in refractory temporal lobe epilepsy.

Keller SS, Richardson MP, O'Muircheartaigh J, Schoene-Bake JC, Elger C, Weber B.

Hum Brain Mapp. 2015 May;36(5):1637-47. doi: 10.1002/hbm.22722. Epub 2015 Feb 19.


Estimating the age of healthy infants from quantitative myelin water fraction maps.

Dean DC 3rd, O'Muircheartaigh J, Dirks H, Waskiewicz N, Lehman K, Walker L, Piryatinsky I, Deoni SC.

Hum Brain Mapp. 2015 Apr;36(4):1233-44. doi: 10.1002/hbm.22671. Epub 2015 Jan 30.


Thalamotemporal alteration and postoperative seizures in temporal lobe epilepsy.

Keller SS, Richardson MP, Schoene-Bake JC, O'Muircheartaigh J, Elkommos S, Kreilkamp B, Goh YY, Marson AG, Elger C, Weber B.

Ann Neurol. 2015 May;77(5):760-74. doi: 10.1002/ana.24376. Epub 2015 Mar 13.


Pharmacologic modulation of hand pain in osteoarthritis: a double-blind placebo-controlled functional magnetic resonance imaging study using naproxen.

Sanders D, Krause K, O'Muircheartaigh J, Thacker MA, Huggins JP, Vennart W, Massat NJ, Choy E, Williams SC, Howard MA.

Arthritis Rheumatol. 2015 Mar;67(3):741-51. doi: 10.1002/art.38987.


White matter maturation profiles through early childhood predict general cognitive ability.

Deoni SC, O'Muircheartaigh J, Elison JT, Walker L, Doernberg E, Waskiewicz N, Dirks H, Piryatinsky I, Dean DC 3rd, Jumbe NL.

Brain Struct Funct. 2016 Mar;221(2):1189-203. doi: 10.1007/s00429-014-0947-x. Epub 2014 Nov 29.


Multivariate decoding of cerebral blood flow measures in a clinical model of on-going postsurgical pain.

O'Muircheartaigh J, Marquand A, Hodkinson DJ, Krause K, Khawaja N, Renton TF, Huggins JP, Vennart W, Williams SC, Howard MA.

Hum Brain Mapp. 2015 Feb;36(2):633-42. doi: 10.1002/hbm.22652. Epub 2014 Oct 12.


Nutritional influences on early white matter development: response to Anderson and Burggren.

Deoni SC, Dean DC 3rd, Walker L, Dirks H, O'Muircheartaigh J.

Neuroimage. 2014 Oct 15;100:703-5. doi: 10.1016/j.neuroimage.2014.07.016. Epub 2014 Jul 24.


Structural changes in the temporal lobe and piriform cortex in frontal lobe epilepsy.

Centeno M, Vollmar C, Stretton J, Symms MR, Thompson PJ, Richardson MP, O'Muircheartaigh J, Duncan JS, Koepp MJ.

Epilepsy Res. 2014 Jul;108(5):978-81. doi: 10.1016/j.eplepsyres.2014.03.001. Epub 2014 Mar 28.


Characterizing longitudinal white matter development during early childhood.

Dean DC 3rd, O'Muircheartaigh J, Dirks H, Waskiewicz N, Walker L, Doernberg E, Piryatinsky I, Deoni SC.

Brain Struct Funct. 2015 Jul;220(4):1921-33. doi: 10.1007/s00429-014-0763-3. Epub 2014 Apr 8.


White matter development and early cognition in babies and toddlers.

O'Muircheartaigh J, Dean DC 3rd, Ginestet CE, Walker L, Waskiewicz N, Lehman K, Dirks H, Piryatinsky I, Deoni SC.

Hum Brain Mapp. 2014 Sep;35(9):4475-87. doi: 10.1002/hbm.22488. Epub 2014 Feb 27.


Thalamotemporal impairment in temporal lobe epilepsy: a combined MRI analysis of structure, integrity, and connectivity.

Keller SS, O'Muircheartaigh J, Traynor C, Towgood K, Barker GJ, Richardson MP.

Epilepsia. 2014 Feb;55(2):306-15. doi: 10.1111/epi.12520. Epub 2014 Jan 21.


Brain differences in infants at differential genetic risk for late-onset Alzheimer disease: a cross-sectional imaging study.

Dean DC 3rd, Jerskey BA, Chen K, Protas H, Thiyyagura P, Roontiva A, O'Muircheartaigh J, Dirks H, Waskiewicz N, Lehman K, Siniard AL, Turk MN, Hua X, Madsen SK, Thompson PM, Fleisher AS, Huentelman MJ, Deoni SC, Reiman EM.

JAMA Neurol. 2014 Jan;71(1):11-22. doi: 10.1001/jamaneurol.2013.4544.


Risk-taking behavior in juvenile myoclonic epilepsy.

Wandschneider B, Centeno M, Vollmar C, Stretton J, O'Muircheartaigh J, Thompson PJ, Kumari V, Symms M, Barker GJ, Duncan JS, Richardson MP, Koepp MJ.

Epilepsia. 2013 Dec;54(12):2158-65. doi: 10.1111/epi.12413. Epub 2013 Oct 18.


Interactions between white matter asymmetry and language during neurodevelopment.

O'Muircheartaigh J, Dean DC 3rd, Dirks H, Waskiewicz N, Lehman K, Jerskey BA, Deoni SC.

J Neurosci. 2013 Oct 9;33(41):16170-7. doi: 10.1523/JNEUROSCI.1463-13.2013.


Modeling healthy male white matter and myelin development: 3 through 60months of age.

Dean DC 3rd, O'Muircheartaigh J, Dirks H, Waskiewicz N, Lehman K, Walker L, Han M, Deoni SC.

Neuroimage. 2014 Jan 1;84:742-52. doi: 10.1016/j.neuroimage.2013.09.058. Epub 2013 Oct 2.


Pediatric neuroimaging using magnetic resonance imaging during non-sedated sleep.

Dean DC 3rd, Dirks H, O'Muircheartaigh J, Walker L, Jerskey BA, Lehman K, Han M, Waskiewicz N, Deoni SC.

Pediatr Radiol. 2014 Jan;44(1):64-72. doi: 10.1007/s00247-013-2752-8. Epub 2013 Aug 6.


Breastfeeding and early white matter development: A cross-sectional study.

Deoni SC, Dean DC 3rd, Piryatinsky I, O'Muircheartaigh J, Waskiewicz N, Lehman K, Han M, Dirks H.

Neuroimage. 2013 Nov 15;82:77-86. doi: 10.1016/j.neuroimage.2013.05.090. Epub 2013 May 28.


Advances in myelin imaging with potential clinical application to pediatric imaging.

Spader HS, Ellermeier A, O'Muircheartaigh J, Dean DC 3rd, Dirks H, Boxerman JL, Cosgrove GR, Deoni SC.

Neurosurg Focus. 2013 Apr;34(4):E9. doi: 10.3171/2013.1.FOCUS12426. Review.


Abnormal thalamocortical structural and functional connectivity in juvenile myoclonic epilepsy.

O'Muircheartaigh J, Vollmar C, Barker GJ, Kumari V, Symms MR, Thompson P, Duncan JS, Koepp MJ, Richardson MP.

Brain. 2012 Dec;135(Pt 12):3635-44. doi: 10.1093/brain/aws296.


Alterations in resting-state regional cerebral blood flow demonstrate ongoing pain in osteoarthritis: An arterial spin-labeled magnetic resonance imaging study.

Howard MA, Sanders D, Krause K, O'Muircheartaigh J, Fotopoulou A, Zelaya F, Thacker M, Massat N, Huggins JP, Vennart W, Choy E, Daniels M, Williams SC.

Arthritis Rheum. 2012 Dec;64(12):3936-46. doi: 10.1002/art.37685.

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