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Best matches for O’Donnell LJ[au]:

Q-space trajectory imaging for multidimensional diffusion MRI of the human brain. Westin CF et al. Neuroimage. (2016)

Does diffusion MRI tell us anything about the white matter? An overview of methods and pitfalls. O'Donnell LJ et al. Schizophr Res. (2015)

Advances in computational and statistical diffusion MRI. O'Donnell LJ et al. NMR Biomed. (2019)

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Items: 1 to 50 of 81


SlicerDMRI: Diffusion MRI and Tractography Research Software for Brain Cancer Surgery Planning and Visualization.

Zhang F, Noh T, Juvekar P, Frisken SF, Rigolo L, Norton I, Kapur T, Pujol S, Wells W 3rd, Yarmarkovich A, Kindlmann G, Wassermann D, San Jose Estepar R, Rathi Y, Kikinis R, Johnson HJ, Westin CF, Pieper S, Golby AJ, O'Donnell LJ.

JCO Clin Cancer Inform. 2020 Mar;4:299-309. doi: 10.1200/CCI.19.00141.


Anatomical assessment of trigeminal nerve tractography using diffusion MRI: A comparison of acquisition b-values and single- and multi-fiber tracking strategies.

Xie G, Zhang F, Leung L, Mooney MA, Epprecht L, Norton I, Rathi Y, Kikinis R, Al-Mefty O, Makris N, Golby AJ, O'Donnell LJ.

Neuroimage Clin. 2020;25:102160. doi: 10.1016/j.nicl.2019.102160. Epub 2020 Jan 8.


Post-Traumatic Cerebral Microhemorrhages and their Effects Upon White Matter Connectivity in the Aging Human Brain.

Fan D, Chaudhari NN, Rostowsky KA, Calvillo M, Lee SK, Chowdhury NF, Zhang F, O'Donnell LJ, Irimia A.

Conf Proc IEEE Eng Med Biol Soc. 2019 Jul;2019:198-203. doi: 10.1109/EMBC.2019.8857921.


MK-curve - Characterizing the relation between mean kurtosis and alterations in the diffusion MRI signal.

Zhang F, Ning L, O'Donnell LJ, Pasternak O.

Neuroimage. 2019 Aug 1;196:68-80. doi: 10.1016/j.neuroimage.2019.04.015. Epub 2019 Apr 10.


Test-retest reproducibility of white matter parcellation using diffusion MRI tractography fiber clustering.

Zhang F, Wu Y, Norton I, Rathi Y, Golby AJ, O'Donnell LJ.

Hum Brain Mapp. 2019 Jul;40(10):3041-3057. doi: 10.1002/hbm.24579. Epub 2019 Mar 15.


Individual variations of the human corticospinal tract and its hand-related motor fibers using diffusion MRI tractography.

Dalamagkas K, Tsintou M, Rathi Y, O'Donnell LJ, Pasternak O, Gong X, Zhu A, Savadjiev P, Papadimitriou GM, Kubicki M, Yeterian EH, Makris N.

Brain Imaging Behav. 2019 Jan 8. doi: 10.1007/s11682-018-0006-y. [Epub ahead of print]


Polygenic Risk and Neural Substrates of Attention-Deficit/Hyperactivity Disorder Symptoms in Youths With a History of Mild Traumatic Brain Injury.

Stojanovski S, Felsky D, Viviano JD, Shahab S, Bangali R, Burton CL, Devenyi GA, O'Donnell LJ, Szatmari P, Chakravarty MM, Ameis S, Schachar R, Voineskos AN, Wheeler AL.

Biol Psychiatry. 2019 Mar 1;85(5):408-416. doi: 10.1016/j.biopsych.2018.06.024. Epub 2018 Jul 12.


An anatomically curated fiber clustering white matter atlas for consistent white matter tract parcellation across the lifespan.

Zhang F, Wu Y, Norton I, Rigolo L, Rathi Y, Makris N, O'Donnell LJ.

Neuroimage. 2018 Oct 1;179:429-447. doi: 10.1016/j.neuroimage.2018.06.027. Epub 2018 Jun 18.


Investigation into local white matter abnormality in emotional processing and sensorimotor areas using an automatically annotated fiber clustering in major depressive disorder.

Wu Y, Zhang F, Makris N, Ning Y, Norton I, She S, Peng H, Rathi Y, Feng Y, Wu H, O'Donnell LJ.

Neuroimage. 2018 Nov 1;181:16-29. doi: 10.1016/j.neuroimage.2018.06.019. Epub 2018 Jul 6.


Genetic load determines atrophy in hand cortico-striatal pathways in presymptomatic Huntington's disease.

Hong Y, O'Donnell LJ, Savadjiev P, Zhang F, Wassermann D, Pasternak O, Johnson H, Paulsen J, Vonsattel JP, Makris N, Westin CF, Rathi Y.

Hum Brain Mapp. 2018 Oct;39(10):3871-3883. doi: 10.1002/hbm.24217. Epub 2018 May 24.


A comparison of three fiber tract delineation methods and their impact on white matter analysis.

Sydnor VJ, Rivas-Grajales AM, Lyall AE, Zhang F, Bouix S, Karmacharya S, Shenton ME, Westin CF, Makris N, Wassermann D, O'Donnell LJ, Kubicki M.

Neuroimage. 2018 Sep;178:318-331. doi: 10.1016/j.neuroimage.2018.05.044. Epub 2018 May 19.


Free water modeling of peritumoral edema using multi-fiber tractography: Application to tracking the arcuate fasciculus for neurosurgical planning.

Gong S, Zhang F, Norton I, Essayed WI, Unadkat P, Rigolo L, Pasternak O, Rathi Y, Hou L, Golby AJ, O'Donnell LJ.

PLoS One. 2018 May 10;13(5):e0197056. doi: 10.1371/journal.pone.0197056. eCollection 2018.


Utilizing Mutual Information Analysis to Explore the Relationship Between Gray and White Matter Structural Pathologies in Schizophrenia.

Lyall AE, Savadjiev P, Del Re EC, Seitz J, O'Donnell LJ, Westin CF, Mesholam-Gately RI, Petryshen T, Wojcik JD, Nestor P, Niznikiewicz M, Goldstein J, Seidman LJ, McCarley RW, Shenton ME, Kubicki M.

Schizophr Bull. 2019 Mar 7;45(2):386-395. doi: 10.1093/schbul/sby028.


Suprathreshold fiber cluster statistics: Leveraging white matter geometry to enhance tractography statistical analysis.

Zhang F, Wu W, Ning L, McAnulty G, Waber D, Gagoski B, Sarill K, Hamoda HM, Song Y, Cai W, Rathi Y, O'Donnell LJ.

Neuroimage. 2018 May 1;171:341-354. doi: 10.1016/j.neuroimage.2018.01.006. Epub 2018 Jan 11.


Image Registration to Compensate for EPI Distortion in Patients with Brain Tumors: An Evaluation of Tract-Specific Effects.

Albi A, Meola A, Zhang F, Kahali P, Rigolo L, Tax CMW, Ciris PA, Essayed WI, Unadkat P, Norton I, Rathi Y, Olubiyi O, Golby AJ, O'Donnell LJ.

J Neuroimaging. 2018 Mar;28(2):173-182. doi: 10.1111/jon.12485. Epub 2018 Jan 10.


Advances in computational and statistical diffusion MRI.

O'Donnell LJ, Daducci A, Wassermann D, Lenglet C.

NMR Biomed. 2019 Apr;32(4):e3805. doi: 10.1002/nbm.3805. Epub 2017 Nov 14. Review.


Brain-Behavior Participant Similarity Networks Among Youth and Emerging Adults with Schizophrenia Spectrum, Autism Spectrum, or Bipolar Disorder and Matched Controls.

Stefanik L, Erdman L, Ameis SH, Foussias G, Mulsant BH, Behdinan T, Goldenberg A, O'Donnell LJ, Voineskos AN.

Neuropsychopharmacology. 2018 Apr;43(5):1180-1188. doi: 10.1038/npp.2017.274. Epub 2017 Nov 6.


SlicerDMRI: Open Source Diffusion MRI Software for Brain Cancer Research.

Norton I, Essayed W, Zhang F, Pujol S, Yarmarkovich A, Golby AJ, Kindlmann G, Wassermann D, Estepar RSJ, Rathi Y, Pieper S, Kikinis R, Johnson HJ, Westin CF, O'Donnell LJ.

Cancer Res. 2017 Nov 1;77(21):e101-e103. doi: 10.1158/0008-5472.CAN-17-0332. Erratum in: Cancer Res. 2018 May 1;78(9):2445.


Whole brain white matter connectivity analysis using machine learning: An application to autism.

Zhang F, Savadjiev P, Cai W, Song Y, Rathi Y, Tunç B, Parker D, Kapur T, Schultz RT, Makris N, Verma R, O'Donnell LJ.

Neuroimage. 2018 May 15;172:826-837. doi: 10.1016/j.neuroimage.2017.10.029. Epub 2017 Oct 25.


Performance of unscented Kalman filter tractography in edema: Analysis of the two-tensor model.

Liao R, Ning L, Chen Z, Rigolo L, Gong S, Pasternak O, Golby AJ, Rathi Y, O'Donnell LJ.

Neuroimage Clin. 2017 Jun 26;15:819-831. doi: 10.1016/j.nicl.2017.06.027. eCollection 2017.


White matter tractography for neurosurgical planning: A topography-based review of the current state of the art.

Essayed WI, Zhang F, Unadkat P, Cosgrove GR, Golby AJ, O'Donnell LJ.

Neuroimage Clin. 2017 Jun 15;15:659-672. doi: 10.1016/j.nicl.2017.06.011. eCollection 2017. Review.


Longitudinal diffusion changes in prodromal and early HD: Evidence of white-matter tract deterioration.

Shaffer JJ, Ghayoor A, Long JD, Kim RE, Lourens S, O'Donnell LJ, Westin CF, Rathi Y, Magnotta V, Paulsen JS, Johnson HJ.

Hum Brain Mapp. 2017 Mar;38(3):1460-1477. doi: 10.1002/hbm.23465. Epub 2017 Jan 3.


Automated white matter fiber tract identification in patients with brain tumors.

O'Donnell LJ, Suter Y, Rigolo L, Kahali P, Zhang F, Norton I, Albi A, Olubiyi O, Meola A, Essayed WI, Unadkat P, Ciris PA, Wells WM 3rd, Rathi Y, Westin CF, Golby AJ.

Neuroimage Clin. 2016 Nov 25;13:138-153. eCollection 2017.


Q-space trajectory imaging for multidimensional diffusion MRI of the human brain.

Westin CF, Knutsson H, Pasternak O, Szczepankiewicz F, Özarslan E, van Westen D, Mattisson C, Bogren M, O'Donnell LJ, Kubicki M, Topgaard D, Nilsson M.

Neuroimage. 2016 Jul 15;135:345-62. doi: 10.1016/j.neuroimage.2016.02.039. Epub 2016 Feb 23.


Corticospinal tract modeling for neurosurgical planning by tracking through regions of peritumoral edema and crossing fibers using two-tensor unscented Kalman filter tractography.

Chen Z, Tie Y, Olubiyi O, Zhang F, Mehrtash A, Rigolo L, Kahali P, Norton I, Pasternak O, Rathi Y, Golby AJ, O'Donnell LJ.

Int J Comput Assist Radiol Surg. 2016 Aug;11(8):1475-86. doi: 10.1007/s11548-015-1344-5. Epub 2016 Jan 13.


Reconstruction of the arcuate fasciculus for surgical planning in the setting of peritumoral edema using two-tensor unscented Kalman filter tractography.

Chen Z, Tie Y, Olubiyi O, Rigolo L, Mehrtash A, Norton I, Pasternak O, Rathi Y, Golby AJ, O'Donnell LJ.

Neuroimage Clin. 2015 Mar 20;7:815-22. doi: 10.1016/j.nicl.2015.03.009. eCollection 2015.


Does diffusion MRI tell us anything about the white matter? An overview of methods and pitfalls.

O'Donnell LJ, Pasternak O.

Schizophr Res. 2015 Jan;161(1):133-41. doi: 10.1016/j.schres.2014.09.007. Epub 2014 Sep 29. Review.


Fiber clustering versus the parcellation-based connectome.

O'Donnell LJ, Golby AJ, Westin CF.

Neuroimage. 2013 Oct 15;80:283-9. doi: 10.1016/j.neuroimage.2013.04.066. Epub 2013 Apr 28.


Computer-assisted photo identification outperforms visible implant elastomers in an endangered salamander, Eurycea tonkawae.

Bendik NF, Morrison TA, Gluesenkamp AG, Sanders MS, O'Donnell LJ.

PLoS One. 2013;8(3):e59424. doi: 10.1371/journal.pone.0059424. Epub 2013 Mar 21.


Unbiased groupwise registration of white matter tractography.

O'Donnell LJ, Wells WM 3rd, Golby AJ, Westin CF.

Med Image Comput Comput Assist Interv. 2012;15(Pt 3):123-30.


fMRI-DTI modeling via landmark distance atlases for prediction and detection of fiber tracts.

O'Donnell LJ, Rigolo L, Norton I, Wells WM 3rd, Westin CF, Golby AJ.

Neuroimage. 2012 Mar;60(1):456-70. doi: 10.1016/j.neuroimage.2011.11.014. Epub 2011 Dec 2.


Fiber geometry in the corpus callosum in schizophrenia: evidence for transcallosal misconnection.

Whitford TJ, Savadjiev P, Kubicki M, O'Donnell LJ, Terry DP, Bouix S, Westin CF, Schneiderman JS, Bobrow L, Rausch AC, Niznikiewicz M, Nestor PG, Pantelis C, Wood SJ, McCarley RW, Shenton ME.

Schizophr Res. 2011 Oct;132(1):69-74. doi: 10.1016/j.schres.2011.07.010. Epub 2011 Aug 9.


Visual pathway study using in vivo diffusion tensor imaging tractography to complement classic anatomy.

Wu W, Rigolo L, O'Donnell LJ, Norton I, Shriver S, Golby AJ.

Neurosurgery. 2012 Mar;70(1 Suppl Operative):145-56; discussion 156. doi: 10.1227/NEU.0b013e31822efcae.


An introduction to diffusion tensor image analysis.

O'Donnell LJ, Westin CF.

Neurosurg Clin N Am. 2011 Apr;22(2):185-96, viii. doi: 10.1016/ Review.


The fiber laterality histogram: a new way to measure white matter asymmetry.

O'Donnell LJ, Westin CF, Norton I, Whalen S, Rigolo L, Propper R, Golby AJ.

Med Image Comput Comput Assist Interv. 2010;13(Pt 2):225-32.


Corpus callosum abnormalities and their association with psychotic symptoms in patients with schizophrenia.

Whitford TJ, Kubicki M, Schneiderman JS, O'Donnell LJ, King R, Alvarado JL, Khan U, Markant D, Nestor PG, Niznikiewicz M, McCarley RW, Westin CF, Shenton ME.

Biol Psychiatry. 2010 Jul 1;68(1):70-7. doi: 10.1016/j.biopsych.2010.03.025. Epub 2010 May 21.


A combined fMRI and DTI examination of functional language lateralization and arcuate fasciculus structure: Effects of degree versus direction of hand preference.

Propper RE, O'Donnell LJ, Whalen S, Tie Y, Norton IH, Suarez RO, Zollei L, Radmanesh A, Golby AJ.

Brain Cogn. 2010 Jul;73(2):85-92. doi: 10.1016/j.bandc.2010.03.004. Epub 2010 Apr 7.


Quantitative examination of a novel clustering method using magnetic resonance diffusion tensor tractography.

Voineskos AN, O'Donnell LJ, Lobaugh NJ, Markant D, Ameis SH, Niethammer M, Mulsant BH, Pollock BG, Kennedy JL, Westin CF, Shenton ME.

Neuroimage. 2009 Apr 1;45(2):370-6. doi: 10.1016/j.neuroimage.2008.12.028. Epub 2008 Dec 29.


Tract-based morphometry for white matter group analysis.

O'Donnell LJ, Westin CF, Golby AJ.

Neuroimage. 2009 Apr 15;45(3):832-44. doi: 10.1016/j.neuroimage.2008.12.023. Epub 2008 Dec 25.


Nonlinear registration of diffusion MR images based on fiber bundles.

Ziyan U, Sabuncu MR, O'Donnell LJ, Westin CF.

Med Image Comput Comput Assist Interv. 2007;10(Pt 1):351-8.


Tract-based morphometry.

O'Donnell LJ, Westin CF, Golby AJ.

Med Image Comput Comput Assist Interv. 2007;10(Pt 2):161-8.


Automatic tractography segmentation using a high-dimensional white matter atlas.

O'Donnell LJ, Westin CF.

IEEE Trans Med Imaging. 2007 Nov;26(11):1562-75.


Prokinetic effect of alpha-adrenergic antagonist, and beta-adrenergic antagonist on gall-bladder motility in humans with gall-stone disease.

Sengupta S, Modak P, McCauley N, O'Donnell LJ.

Eur J Gastroenterol Hepatol. 2007 Jul;19(7):581-3.


Effect of oral clarithromycin on gall-bladder motility in normal subjects and those with gall-stones.

Sengupta S, Modak P, McCauley N, O'Donnell LJ.

Aliment Pharmacol Ther. 2006 Jul 1;24(1):95-9.


A method for clustering white matter fiber tracts.

O'Donnell LJ, Kubicki M, Shenton ME, Dreusicke MH, Grimson WE, Westin CF.

AJNR Am J Neuroradiol. 2006 May;27(5):1032-6.


24-hour secretion patterns of plasma oestradiol 17beta in pony mares in late gestation.

O'Donnell LJ, Sheerin BR, Hendry JM, Thatcher MJ, Thatcher WW, LeBlanc MM.

Reprod Domest Anim. 2003 Jun;38(3):233-5.


Prokinetic effect of indoramin, an alpha-adrenergic antagonist, on human gall-bladder.

Sengupta S, Cooney R, Baj M, Ni'Muircheartaigh R, O'Donnell LJ.

Aliment Pharmacol Ther. 2002 Oct;16(10):1801-3.


Endothelin content, expression, and receptor type in normal and diseased human gallbladder.

McCartney SA, Greaves RR, Warner TD, O'Donnell LJ, Domizio P, Farthing MJ.

Dig Dis Sci. 2002 Aug;47(8):1786-92.


An integrated visualization system for surgical planning and guidance using image fusion and an open MR.

Gering DT, Nabavi A, Kikinis R, Hata N, O'Donnell LJ, Grimson WE, Jolesz FA, Black PM, Wells WM 3rd.

J Magn Reson Imaging. 2001 Jun;13(6):967-75.


Differential effect of prostaglandins on gallstone-free and gallstone-containing human gallbladder.

Greaves RR, O'Donnell LJ, Farthing MJ.

Dig Dis Sci. 2000 Dec;45(12):2376-81.


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