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Items: 22

1.

Identifying Bird Remains Using Ancient DNA Barcoding.

Dalén L, Lagerholm VK, Nylander JAA, Barton N, Bochenski ZM, Tomek T, Rudling D, Ericson PGP, Irestedt M, Stewart JR.

Genes (Basel). 2017 Jun 21;8(6). pii: E169. doi: 10.3390/genes8060169.

2.

Metagenomic Analysis of the Indian Ocean Picocyanobacterial Community: Structure, Potential Function and Evolution.

Díez B, Nylander JA, Ininbergs K, Dupont CL, Allen AE, Yooseph S, Rusch DB, Bergman B.

PLoS One. 2016 May 19;11(5):e0155757. doi: 10.1371/journal.pone.0155757. eCollection 2016.

3.

Metagenomic Analysis from the Interior of a Speleothem in Tjuv-Ante's Cave, Northern Sweden.

Zepeda Mendoza ML, Lundberg J, Ivarsson M, Campos P, Nylander JA, Sallstedt T, Dalen L.

PLoS One. 2016 Mar 17;11(3):e0151577. doi: 10.1371/journal.pone.0151577. eCollection 2016.

4.

Phylogeny, evolution and classification of gall wasps: the plot thickens.

Ronquist F, Nieves-Aldrey JL, Buffington ML, Liu Z, Liljeblad J, Nylander JA.

PLoS One. 2015 May 20;10(5):e0123301. doi: 10.1371/journal.pone.0123301. eCollection 2015.

5.

Local hopping mobile DNA implicated in pseudogene formation and reductive evolution in an obligate cyanobacteria-plant symbiosis.

Vigil-Stenman T, Larsson J, Nylander JA, Bergman B.

BMC Genomics. 2015 Mar 17;16:193. doi: 10.1186/s12864-015-1386-7.

6.

Functional tradeoffs underpin salinity-driven divergence in microbial community composition.

Dupont CL, Larsson J, Yooseph S, Ininbergs K, Goll J, Asplund-Samuelsson J, McCrow JP, Celepli N, Allen LZ, Ekman M, Lucas AJ, Hagström Å, Thiagarajan M, Brindefalk B, Richter AR, Andersson AF, Tenney A, Lundin D, Tovchigrechko A, Nylander JA, Brami D, Badger JH, Allen AE, Rusch DB, Hoffman J, Norrby E, Friedman R, Pinhassi J, Venter JC, Bergman B.

PLoS One. 2014 Feb 27;9(2):e89549. doi: 10.1371/journal.pone.0089549. eCollection 2014.

7.

Dating the diversification of the major lineages of Passeriformes (Aves).

Ericson PG, Klopfstein S, Irestedt M, Nguyen JM, Nylander JA.

BMC Evol Biol. 2014 Jan 15;14:8. doi: 10.1186/1471-2148-14-8.

8.

Genome fluctuations in cyanobacteria reflect evolutionary, developmental and adaptive traits.

Larsson J, Nylander JA, Bergman B.

BMC Evol Biol. 2011 Jun 30;11:187. doi: 10.1186/1471-2148-11-187.

9.

Genome erosion in a nitrogen-fixing vertically transmitted endosymbiotic multicellular cyanobacterium.

Ran L, Larsson J, Vigil-Stenman T, Nylander JA, Ininbergs K, Zheng WW, Lapidus A, Lowry S, Haselkorn R, Bergman B.

PLoS One. 2010 Jul 8;5(7):e11486. doi: 10.1371/journal.pone.0011486. Erratum in: PLoS One. 2010;5(9) doi: 10.1371/annotation/835c5766-5128-41c4-b636-adfe0c503103.

10.

Resources for genetic management and genomics research on non-human primates at the National Primate Research Centers (NPRCs).

Kanthaswamy S, Capitanio JP, Dubay CJ, Ferguson B, Folks T, Ha JC, Hotchkiss CE, Johnson ZP, Katze MG, Kean LS, Kubisch HM, Lank S, Lyons LA, Miller GM, Nylander J, O'Connor DH, Palermo RE, Smith DG, Vallender EJ, Wiseman RW, Rogers J.

J Med Primatol. 2009 Oct;38 Suppl 1:17-23. doi: 10.1111/j.1600-0684.2009.00371.x.

PMID:
19863674
11.

Resource brief: the National Non-Human Primate DNA Bank.

Ferguson B, Capitanio J, Folks T, Hotchkiss C, Johnson Z, Kean L, Kubisch HM, Lank S, Lyons L, Miller GM, Nylander J, O'Connor D, Vallender EJ, Wiseman R.

Methods. 2009 Sep;49(1):3-4. doi: 10.1016/j.ymeth.2009.07.011.

12.

Tracing the impact of the Andean uplift on Neotropical plant evolution.

Antonelli A, Nylander JA, Persson C, Sanmartín I.

Proc Natl Acad Sci U S A. 2009 Jun 16;106(24):9749-54. doi: 10.1073/pnas.0811421106. Epub 2009 May 22.

13.

Plastid and nuclear DNA markers reveal intricate relationships at subfamilial and tribal levels in the soapberry family (Sapindaceae).

Buerki S, Forest F, Acevedo-Rodríguez P, Callmander MW, Nylander JA, Harrington M, Sanmartín I, Küpfer P, Alvarez N.

Mol Phylogenet Evol. 2009 May;51(2):238-58.

PMID:
19405193
14.

Allopolyploidy in Fragariinae (Rosaceae): comparing four DNA sequence regions, with comments on classification.

Lundberg M, Töpel M, Eriksen B, Nylander JA, Eriksson T.

Mol Phylogenet Evol. 2009 May;51(2):269-80. doi: 10.1016/j.ympev.2009.02.020. Epub 2009 Mar 5.

PMID:
19268709
15.

Accounting for phylogenetic uncertainty in biogeography: a Bayesian approach to dispersal-vicariance analysis of the thrushes (Aves: Turdus).

Nylander JA, Olsson U, Alström P, Sanmartín I.

Syst Biol. 2008 Apr;57(2):257-68. doi: 10.1080/10635150802044003.

PMID:
18425716
16.

AWTY (are we there yet?): a system for graphical exploration of MCMC convergence in Bayesian phylogenetics.

Nylander JA, Wilgenbusch JC, Warren DL, Swofford DL.

Bioinformatics. 2008 Feb 15;24(4):581-3. Epub 2007 Aug 30.

PMID:
17766271
17.
18.

Phylogenetic relationships of typical antbirds (Thamnophilidae) and test of incongruence based on Bayes factors.

Irestedt M, Fjeldså J, Nylander JA, Ericson PG.

BMC Evol Biol. 2004 Jul 30;4:23.

19.

Bayesian phylogenetic analysis of combined data.

Nylander JA, Ronquist F, Huelsenbeck JP, Nieves-Aldrey JL.

Syst Biol. 2004 Feb;53(1):47-67.

PMID:
14965900
20.
21.

Eagle's syndrome: a clinical report and review of the literature.

Manganaro AM, Nylander J.

Gen Dent. 1998 May-Jun;46(3):282-4. Review.

PMID:
9693542
22.

Malignant hyperthermia. Report of two cases.

Krakowiak FJ, Vatral JJ, Moore RC Jr, Pickett AB, Nylander JE, Gullett FC.

Oral Surg Oral Med Oral Pathol. 1979 Mar;47(3):218-22.

PMID:
283351

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