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Items: 1 to 50 of 73

1.

Root-Associated Microbial Communities of Abies nordmanniana: Insights Into Interactions of Microbial Communities With Antioxidative Enzymes and Plant Growth.

Garcia-Lemos AM, Großkinsky DK, Stokholm MS, Lund OS, Nicolaisen MH, Roitsch TG, Veierskov B, Nybroe O.

Front Microbiol. 2019 Aug 22;10:1937. doi: 10.3389/fmicb.2019.01937. eCollection 2019.

2.

Suppression of arbuscular mycorrhizal fungal activity in a diverse collection of non-cultivated soils.

Cruz-Paredes C, Svenningsen NB, Nybroe O, Kjøller R, Frøslev TG, Jakobsen I.

FEMS Microbiol Ecol. 2019 Mar 1;95(3). pii: fiz020. doi: 10.1093/femsec/fiz020.

PMID:
30715290
3.

Bacterial Dispersers along Preferential Flow Paths of a Clay Till Depth Profile.

Krüger US, Dechesne A, Bak F, Badawi N, Nybroe O, Aamand J.

Appl Environ Microbiol. 2019 Mar 6;85(6). pii: e02658-18. doi: 10.1128/AEM.02658-18. Print 2019 Mar 15.

4.

Preferential flow paths shape the structure of bacterial communities in a clayey till depth profile.

Bak F, Nybroe O, Zheng B, Badawi N, Hao X, Nicolaisen MH, Aamand J.

FEMS Microbiol Ecol. 2019 Mar 1;95(3). pii: fiz008. doi: 10.1093/femsec/fiz008.

5.

The biofilm matrix polysaccharides cellulose and alginate both protect Pseudomonas putida mt-2 against reactive oxygen species generated under matric stress and copper exposure.

Svenningsen NB, Martínez-García E, Nicolaisen MH, de Lorenzo V, Nybroe O.

Microbiology. 2018 Jun;164(6):883-888. doi: 10.1099/mic.0.000667. Epub 2018 May 8.

PMID:
29738306
6.

Suppression of the activity of arbuscular mycorrhizal fungi by the soil microbiota.

Svenningsen NB, Watts-Williams SJ, Joner EJ, Battini F, Efthymiou A, Cruz-Paredes C, Nybroe O, Jakobsen I.

ISME J. 2018 May;12(5):1296-1307. doi: 10.1038/s41396-018-0059-3. Epub 2018 Jan 30.

7.

Novel Method Reveals a Narrow Phylogenetic Distribution of Bacterial Dispersers in Environmental Communities Exposed to Low-Hydration Conditions.

Krüger US, Bak F, Aamand J, Nybroe O, Badawi N, Smets BF, Dechesne A.

Appl Environ Microbiol. 2018 Mar 19;84(7). pii: e02857-17. doi: 10.1128/AEM.02857-17. Print 2018 Apr 1.

8.

Cupriavidus pinatubonensis AEO106 deals with copper-induced oxidative stress before engaging in biodegradation of the herbicide 4-chloro-2-methylphenoxyacetic acid.

Svenningsen NB, Damgaard M, Rasmussen M, Pérez-Pantoja D, Nybroe O, Nicolaisen MH.

BMC Microbiol. 2017 Oct 30;17(1):211. doi: 10.1186/s12866-017-1119-y.

9.

A novel baiting microcosm approach used to identify the bacterial community associated with Penicillium bilaii hyphae in soil.

Ghodsalavi B, Svenningsen NB, Hao X, Olsson S, Nicolaisen MH, Al-Soud WA, Sørensen SJ, Nybroe O.

PLoS One. 2017 Oct 27;12(10):e0187116. doi: 10.1371/journal.pone.0187116. eCollection 2017.

10.

Nitrogen regulation of the xyl genes of Pseudomonas putida mt-2 propagates into a significant effect of nitrate on m-xylene mineralization in soil.

Svenningsen NB, Nicolaisen MH, Hansen HC, de Lorenzo V, Nybroe O.

Microb Biotechnol. 2016 Nov;9(6):814-823. doi: 10.1111/1751-7915.12404. Epub 2016 Aug 26.

11.

Adhesion to sand and ability to mineralise low pesticide concentrations are required for efficient bioaugmentation of flow-through sand filters.

Samuelsen ED, Badawi N, Nybroe O, Sørensen SR, Aamand J.

Appl Microbiol Biotechnol. 2017 Jan;101(1):411-421. doi: 10.1007/s00253-016-7909-6. Epub 2016 Oct 12.

PMID:
27734123
12.

Pseudomonas putida mt-2 tolerates reactive oxygen species generated during matric stress by inducing a major oxidative defense response.

Svenningsen NB, Pérez-Pantoja D, Nikel PI, Nicolaisen MH, de Lorenzo V, Nybroe O.

BMC Microbiol. 2015 Oct 6;15:202. doi: 10.1186/s12866-015-0542-1.

13.

Lipopeptide biosurfactant viscosin enhances dispersal of Pseudomonas fluorescens SBW25 biofilms.

Bonnichsen L, Bygvraa Svenningsen N, Rybtke M, de Bruijn I, Raaijmakers JM, Tolker-Nielsen T, Nybroe O.

Microbiology. 2015 Dec;161(12):2289-97. doi: 10.1099/mic.0.000191. Epub 2015 Sep 28.

14.

The biosurfactant viscosin transiently stimulates n-hexadecane mineralization by a bacterial consortium.

Bak F, Bonnichsen L, Jørgensen NO, Nicolaisen MH, Nybroe O.

Appl Microbiol Biotechnol. 2015 Feb;99(3):1475-83. doi: 10.1007/s00253-014-6054-3. Epub 2014 Sep 14.

15.

Evaluation of the leucine incorporation technique for detection of pollution-induced community tolerance to copper in a long-term agricultural field trial with urban waste fertilizers.

Lekfeldt JDS, Magid J, Holm PE, Nybroe O, Brandt KK.

Environ Pollut. 2014 Nov;194:78-85. doi: 10.1016/j.envpol.2014.07.013. Epub 2014 Aug 4.

PMID:
25094060
16.

Selection for Cu-tolerant bacterial communities with altered composition, but unaltered richness, via long-term Cu exposure.

Berg J, Brandt KK, Al-Soud WA, Holm PE, Hansen LH, Sørensen SJ, Nybroe O.

Appl Environ Microbiol. 2012 Oct;78(20):7438-46. Epub 2012 Aug 17.

17.

Proteinase production in Pseudomonas fluorescens ON2 is affected by carbon sources and allows surface-attached but not planktonic cells to utilize protein for growth in lake water.

Nicolaisen MH, Worm J, Jørgensen NO, Middelboe M, Nybroe O.

FEMS Microbiol Ecol. 2012 Apr;80(1):168-78. doi: 10.1111/j.1574-6941.2011.01285.x. Epub 2012 Jan 16.

18.

Low concentration of copper inhibits colonization of soil by the arbuscular mycorrhizal fungus Glomus intraradices and changes the microbial community structure.

Hagerberg D, Manique N, Brandt KK, Larsen J, Nybroe O, Olsson S.

Microb Ecol. 2011 May;61(4):844-52. doi: 10.1007/s00248-010-9795-2. Epub 2011 Jan 20.

PMID:
21249353
19.

Cu exposure under field conditions coselects for antibiotic resistance as determined by a novel cultivation-independent bacterial community tolerance assay.

Berg J, Thorsen MK, Holm PE, Jensen J, Nybroe O, Brandt KK.

Environ Sci Technol. 2010 Nov 15;44(22):8724-8. doi: 10.1021/es101798r. Epub 2010 Oct 22.

PMID:
20964403
20.

2,6-Dichlorobenzamide (BAM) herbicide mineralisation by Aminobacter sp. MSH1 during starvation depends on a subpopulation of intact cells maintaining vital membrane functions.

Sjøholm OR, Nybroe O, Aamand J, Sørensen J.

Environ Pollut. 2010 Dec;158(12):3618-25. doi: 10.1016/j.envpol.2010.08.006. Epub 2010 Sep 9.

PMID:
20828902
21.

Natural functions of lipopeptides from Bacillus and Pseudomonas: more than surfactants and antibiotics.

Raaijmakers JM, De Bruijn I, Nybroe O, Ongena M.

FEMS Microbiol Rev. 2010 Nov;34(6):1037-62. doi: 10.1111/j.1574-6976.2010.00221.x. Review.

22.

Vogesella mureinivorans sp. nov., a peptidoglycan-degrading bacterium from lake water.

Jørgensen NO, Brandt KK, Nybroe O, Hansen M.

Int J Syst Evol Microbiol. 2010 Oct;60(Pt 10):2467-72. doi: 10.1099/ijs.0.018630-0. Epub 2009 Nov 27.

PMID:
19946047
23.

Degrader density determines spatial variability of 2,6-dichlorobenzamide mineralisation in soil.

Sjøholm OR, Aamand J, Sørensen J, Nybroe O.

Environ Pollut. 2010 Jan;158(1):292-8. doi: 10.1016/j.envpol.2009.07.002. Epub 2009 Aug 7.

PMID:
19665269
24.

Delftia lacustris sp. nov., a peptidoglycan-degrading bacterium from fresh water, and emended description of Delftia tsuruhatensis as a peptidoglycan-degrading bacterium.

Jørgensen NO, Brandt KK, Nybroe O, Hansen M.

Int J Syst Evol Microbiol. 2009 Sep;59(Pt 9):2195-9. doi: 10.1099/ijs.0.008375-0. Epub 2009 Jul 15. Erratum in: Int J Syst Evol Microbiol. 2012 Jan;62(Pt 1):259.

PMID:
19605727
25.

Bacteriophages drive strain diversification in a marine Flavobacterium: implications for phage resistance and physiological properties.

Middelboe M, Holmfeldt K, Riemann L, Nybroe O, Haaber J.

Environ Microbiol. 2009 Aug;11(8):1971-82. doi: 10.1111/j.1462-2920.2009.01920.x. Epub 2009 Mar 31.

PMID:
19508553
26.

Increased pollution-induced bacterial community tolerance to sulfadiazine in soil hotspots amended with artificial root exudates.

Brandt KK, Sjøholm OR, Krogh KA, Halling-Sørensen B, Nybroe O.

Environ Sci Technol. 2009 Apr 15;43(8):2963-8.

PMID:
19475978
27.

Functional GacS in Pseudomonas DSS73 prevents digestion by Caenorhabditis elegans and protects the nematode from killer flagellates.

Bjørnlund L, Rønn R, Péchy-Tarr M, Maurhofer M, Keel C, Nybroe O.

ISME J. 2009 Jul;3(7):770-9. doi: 10.1038/ismej.2009.28. Epub 2009 Apr 2.

PMID:
19340083
28.

Bacterial feeders, the nematode Caenorhabditis elegans and the flagellate Cercomonas longicauda, have different effects on outcome of competition among the Pseudomonas biocontrol strains CHA0 and DSS73.

Pedersen AL, Nybroe O, Winding A, Ekelund F, Bjørnlund L.

Microb Ecol. 2009 Apr;57(3):501-9. doi: 10.1007/s00248-008-9455-y. Epub 2008 Oct 31.

PMID:
18975025
29.

Effect of availability of nitrogen compounds on community structure of aquatic bacteria in model systems.

Frette L, Jørgensen NO, Nybroe O, Del Giorgio PA, Kroer N.

Microb Ecol. 2009 Jan;57(1):104-16. doi: 10.1007/s00248-008-9404-9. Epub 2008 Jun 11.

PMID:
18545866
30.

Differential bioavailability of copper complexes to bioluminescent Pseudomonas fluorescens reporter strains.

Nybroe O, Brandt KK, Ibrahim YM, Tom-Petersen A, Holm PE.

Environ Toxicol Chem. 2008 Nov;27(11):2246-52. doi: 10.1897/08-025.1.

PMID:
18532872
32.

Large variabilities in host strain susceptibility and phage host range govern interactions between lytic marine phages and their Flavobacterium hosts.

Holmfeldt K, Middelboe M, Nybroe O, Riemann L.

Appl Environ Microbiol. 2007 Nov;73(21):6730-9. Epub 2007 Aug 31.

34.
35.
36.

Genes involved in cyclic lipopeptide production are important for seed and straw colonization by Pseudomonas sp. strain DSS73.

Nielsen TH, Nybroe O, Koch B, Hansen M, Sørensen J.

Appl Environ Microbiol. 2005 Jul;71(7):4112-6.

37.

Copper amendment of agricultural soil selects for bacterial antibiotic resistance in the field.

Berg J, Tom-Petersen A, Nybroe O.

Lett Appl Microbiol. 2005;40(2):146-51.

38.

Functional characteristics of culturable bacterioplankton from marine and estuarine environments.

Frette L, Johnsen K, Jørgensen NO, Nybroe O, Kroer N.

Int Microbiol. 2004 Sep;7(3):219-27.

39.

Time and moisture effects on total and bioavailable copper in soil water extracts.

Tom-Petersen A, Hansen HC, Nybroe O.

J Environ Qual. 2004 Mar-Apr;33(2):505-12.

PMID:
15074801
40.

Occurrence and degradation of peptidoglycan in aquatic environments.

Jørgensen NO, Stepanaukas R, Pedersen AG, Hansen M, Nybroe O.

FEMS Microbiol Ecol. 2003 Dec 1;46(3):269-80. doi: 10.1016/S0168-6496(03)00194-6.

41.

Effects of copper amendment on the bacterial community in agricultural soil analyzed by the T-RFLP technique.

Tom-Petersen A, Leser TD, Marsh TL, Nybroe O.

FEMS Microbiol Ecol. 2003 Oct 1;46(1):53-62. doi: 10.1016/S0168-6496(03)00192-2.

42.

Surface motility in Pseudomonas sp. DSS73 is required for efficient biological containment of the root-pathogenic microfungi Rhizoctonia solani and Pythium ultimum.

Andersen JB, Koch B, Nielsen TH, Sørensen D, Hansen M, Nybroe O, Christophersen C, Sørensen J, Molin S, Givskov M.

Microbiology. 2003 Jan;149(Pt 1):37-46.

PMID:
12576578
43.

Lipopeptide production in Pseudomonas sp. strain DSS73 is regulated by components of sugar beet seed exudate via the Gac two-component regulatory system.

Koch B, Nielsen TH, Sørensen D, Andersen JB, Christophersen C, Molin S, Givskov M, Sørensen J, Nybroe O.

Appl Environ Microbiol. 2002 Sep;68(9):4509-16.

44.

An altered Pseudomonas diversity is recovered from soil by using nutrient-poor Pseudomonas-selective soil extract media.

Aagot N, Nybroe O, Nielsen P, Johnsen K.

Appl Environ Microbiol. 2001 Nov;67(11):5233-9.

45.
46.

Carbon limitation induces sigma(S)-dependent gene expression in Pseudomonas fluorescens in soil.

Koch B, Worm J, Jensen LE, Højberg O, Nybroe O.

Appl Environ Microbiol. 2001 Aug;67(8):3363-70.

48.

Interactions between proteolytic and non-proteolytic Pseudomonas fluorescens affect protein degradation in a model community.

Worm J, Jensen LE, Hansen TS, Søndergaard M, Nybroe O.

FEMS Microbiol Ecol. 2000 Apr 1;32(2):103-109.

49.

Emergency derepression: stringency allows RNA polymerase to override negative control by an active repressor.

Kvint K, Hosbond C, Farewell A, Nybroe O, Nyström T.

Mol Microbiol. 2000 Jan;35(2):435-43.

50.

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