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Items: 43

1.

BioSankey: Visualization of Microbial Communities Over Time.

Platzer A, Polzin J, Rembart K, Han PP, Rauer D, Nussbaumer T.

J Integr Bioinform. 2018 Jun 13. pii: /j/jib.ahead-of-print/jib-2017-0063/jib-2017-0063.xml. doi: 10.1515/jib-2017-0063. [Epub ahead of print]

PMID:
29897884
2.

miR172 downregulates the translation of cleistogamy 1 in barley.

Anwar N, Ohta M, Yazawa T, Sato Y, Li C, Tagiri A, Sakuma M, Nussbaumer T, Bregitzer P, Pourkheirandish M, Wu J, Komatsuda T.

Ann Bot. 2018 May 22. doi: 10.1093/aob/mcy058. [Epub ahead of print]

PMID:
29790929
3.

Ultrafast rotation of magnetically levitated macroscopic steel spheres.

Schuck M, Steinert D, Nussbaumer T, Kolar JW.

Sci Adv. 2018 Jan 5;4(1):e1701519. doi: 10.1126/sciadv.1701519. eCollection 2018 Jan.

4.

Peripheral blood vessels are a niche for blood-borne meningococci.

Capel E, Barnier JP, Zomer AL, Bole-Feysot C, Nussbaumer T, Jamet A, Lécuyer H, Euphrasie D, Virion Z, Frapy E, Pélissier P, Join-Lambert O, Rattei T, Bourdoulous S, Nassif X, Coureuil M.

Virulence. 2017 Nov 17;8(8):1808-1819. doi: 10.1080/21505594.2017.1391446. Epub 2017 Nov 27.

PMID:
29099305
5.

The desert plant Phoenix dactylifera closes stomata via nitrate-regulated SLAC1 anion channel.

Müller HM, Schäfer N, Bauer H, Geiger D, Lautner S, Fromm J, Riederer M, Bueno A, Nussbaumer T, Mayer K, Alquraishi SA, Alfarhan AH, Neher E, Al-Rasheid KAS, Ache P, Hedrich R.

New Phytol. 2017 Oct;216(1):150-162. doi: 10.1111/nph.14672. Epub 2017 Jul 3.

PMID:
28670699
6.

Seoul Virus Infection in Humans, France, 2014-2016.

Reynes JM, Carli D, Bour JB, Boudjeltia S, Dewilde A, Gerbier G, Nussbaumer T, Jacomo V, Rapt MP, Rollin PE, Septfons A.

Emerg Infect Dis. 2017 Jun;23(6):973-977. doi: 10.3201/eid2306.160927. Epub 2017 Jun 15.

7.

Time-course expression QTL-atlas of the global transcriptional response of wheat to Fusarium graminearum.

Samad-Zamini M, Schweiger W, Nussbaumer T, Mayer KFX, Buerstmayr H.

Plant Biotechnol J. 2017 Nov;15(11):1453-1464. doi: 10.1111/pbi.12729. Epub 2017 Apr 21.

8.

Natural haplotypes of FLM non-coding sequences fine-tune flowering time in ambient spring temperatures in Arabidopsis.

Lutz U, Nussbaumer T, Spannagl M, Diener J, Mayer KF, Schwechheimer C.

Elife. 2017 Mar 15;6. pii: e22114. doi: 10.7554/eLife.22114.

9.

PGSB/MIPS PlantsDB Database Framework for the Integration and Analysis of Plant Genome Data.

Spannagl M, Nussbaumer T, Bader K, Gundlach H, Mayer KF.

Methods Mol Biol. 2017;1533:33-44.

PMID:
27987163
10.

transPLANT Resources for Triticeae Genomic Data.

Spannagl M, Alaux M, Lange M, Bolser DM, Bader KC, Letellier T, Kimmel E, Flores R, Pommier C, Kerhornou A, Walts B, Nussbaumer T, Grabmuller C, Chen J, Colmsee C, Beier S, Mascher M, Schmutzer T, Arend D, Thanki A, Ramirez-Gonzalez R, Ayling M, Ayling S, Caccamo M, Mayer KF, Scholz U, Steinbach D, Quesneville H, Kersey PJ.

Plant Genome. 2016 Mar;9(1). doi: 10.3835/plantgenome2015.06.0038.

11.

Examining the Transcriptional Response in Wheat Near-Isogenic Lines to Infection and Deoxynivalenol Treatment.

Hofstad AN, Nussbaumer T, Akhunov E, Shin S, Kugler KG, Kistler HC, Mayer KF, Muehlbauer GJ.

Plant Genome. 2016 Mar;9(1). doi: 10.3835/plantgenome2015.05.0032.

12.

Comprehensive Identification of Meningococcal Genes and Small Noncoding RNAs Required for Host Cell Colonization.

Capel E, Zomer AL, Nussbaumer T, Bole C, Izac B, Frapy E, Meyer J, Bouzinba-Ségard H, Bille E, Jamet A, Cavau A, Letourneur F, Bourdoulous S, Rattei T, Nassif X, Coureuil M.

MBio. 2016 Aug 2;7(4). pii: e01173-16. doi: 10.1128/mBio.01173-16.

13.

Suppressed recombination and unique candidate genes in the divergent haplotype encoding Fhb1, a major Fusarium head blight resistance locus in wheat.

Schweiger W, Steiner B, Vautrin S, Nussbaumer T, Siegwart G, Zamini M, Jungreithmeier F, Gratl V, Lemmens M, Mayer KF, Bérgès H, Adam G, Buerstmayr H.

Theor Appl Genet. 2016 Aug;129(8):1607-23. doi: 10.1007/s00122-016-2727-x. Epub 2016 May 12.

14.

EffectiveDB--updates and novel features for a better annotation of bacterial secreted proteins and Type III, IV, VI secretion systems.

Eichinger V, Nussbaumer T, Platzer A, Jehl MA, Arnold R, Rattei T.

Nucleic Acids Res. 2016 Jan 4;44(D1):D669-74. doi: 10.1093/nar/gkv1269. Epub 2015 Nov 20.

15.

PGSB PlantsDB: updates to the database framework for comparative plant genome research.

Spannagl M, Nussbaumer T, Bader KC, Martis MM, Seidel M, Kugler KG, Gundlach H, Mayer KF.

Nucleic Acids Res. 2016 Jan 4;44(D1):D1141-7. doi: 10.1093/nar/gkv1130. Epub 2015 Nov 2.

16.

PGSB/MIPS Plant Genome Information Resources and Concepts for the Analysis of Complex Grass Genomes.

Spannagl M, Bader K, Pfeifer M, Nussbaumer T, Mayer KF.

Methods Mol Biol. 2016;1374:165-86. doi: 10.1007/978-1-4939-3167-5_8.

PMID:
26519405
17.

Joint Transcriptomic and Metabolomic Analyses Reveal Changes in the Primary Metabolism and Imbalances in the Subgenome Orchestration in the Bread Wheat Molecular Response to Fusarium graminearum.

Nussbaumer T, Warth B, Sharma S, Ametz C, Bueschl C, Parich A, Pfeifer M, Siegwart G, Steiner B, Lemmens M, Schuhmacher R, Buerstmayr H, Mayer KF, Kugler KG, Schweiger W.

G3 (Bethesda). 2015 Oct 4;5(12):2579-92. doi: 10.1534/g3.115.021550.

18.

The Genetic Basis of Composite Spike Form in Barley and 'Miracle-Wheat'.

Poursarebani N, Seidensticker T, Koppolu R, Trautewig C, Gawroński P, Bini F, Govind G, Rutten T, Sakuma S, Tagiri A, Wolde GM, Youssef HM, Battal A, Ciannamea S, Fusca T, Nussbaumer T, Pozzi C, Börner A, Lundqvist U, Komatsuda T, Salvi S, Tuberosa R, Uauy C, Sreenivasulu N, Rossini L, Schnurbusch T.

Genetics. 2015 Sep;201(1):155-65. doi: 10.1534/genetics.115.176628. Epub 2015 Jul 7.

19.

chromoWIZ: a web tool to query and visualize chromosome-anchored genes from cereal and model genomes.

Nussbaumer T, Kugler KG, Schweiger W, Bader KC, Gundlach H, Spannagl M, Poursarebani N, Pfeifer M, Mayer KF.

BMC Plant Biol. 2014 Dec 10;14:348. doi: 10.1186/s12870-014-0348-6.

20.

RNASeqExpressionBrowser--a web interface to browse and visualize high-throughput expression data.

Nussbaumer T, Kugler KG, Bader KC, Sharma S, Seidel M, Mayer KF.

Bioinformatics. 2014 Sep 1;30(17):2519-20. doi: 10.1093/bioinformatics/btu334. Epub 2014 May 14.

PMID:
24833805
21.

Whole-genome profiling and shotgun sequencing delivers an anchored, gene-decorated, physical map assembly of bread wheat chromosome 6A.

Poursarebani N, Nussbaumer T, Simková H, Safář J, Witsenboer H, van Oeveren J, Doležel J, Mayer KF, Stein N, Schnurbusch T.

Plant J. 2014 Jul;79(2):334-47. doi: 10.1111/tpj.12550. Epub 2014 Jun 19.

22.

The Spirodela polyrhiza genome reveals insights into its neotenous reduction fast growth and aquatic lifestyle.

Wang W, Haberer G, Gundlach H, Gläßer C, Nussbaumer T, Luo MC, Lomsadze A, Borodovsky M, Kerstetter RA, Shanklin J, Byrant DW, Mockler TC, Appenroth KJ, Grimwood J, Jenkins J, Chow J, Choi C, Adam C, Cao XH, Fuchs J, Schubert I, Rokhsar D, Schmutz J, Michael TP, Mayer KF, Messing J.

Nat Commun. 2014;5:3311. doi: 10.1038/ncomms4311.

23.

A sequence-ready physical map of barley anchored genetically by two million single-nucleotide polymorphisms.

Ariyadasa R, Mascher M, Nussbaumer T, Schulte D, Frenkel Z, Poursarebani N, Zhou R, Steuernagel B, Gundlach H, Taudien S, Felder M, Platzer M, Himmelbach A, Schmutzer T, Hedley PE, Muehlbauer GJ, Scholz U, Korol A, Mayer KF, Waugh R, Langridge P, Graner A, Stein N.

Plant Physiol. 2014 Jan;164(1):412-23. doi: 10.1104/pp.113.228213. Epub 2013 Nov 15.

24.

Quantitative trait loci-dependent analysis of a gene co-expression network associated with Fusarium head blight resistance in bread wheat (Triticum aestivum L.).

Kugler KG, Siegwart G, Nussbaumer T, Ametz C, Spannagl M, Steiner B, Lemmens M, Mayer KF, Buerstmayr H, Schweiger W.

BMC Genomics. 2013 Oct 24;14:728. doi: 10.1186/1471-2164-14-728.

25.

Analysing complex Triticeae genomes - concepts and strategies.

Spannagl M, Martis MM, Pfeifer M, Nussbaumer T, Mayer KF.

Plant Methods. 2013 Sep 6;9(1):35. doi: 10.1186/1746-4811-9-35.

26.

Towards positional isolation of three quantitative trait loci conferring resistance to powdery mildew in two Spanish barley landraces.

Silvar C, Perovic D, Nussbaumer T, Spannagl M, Usadel B, Casas A, Igartua E, Ordon F.

PLoS One. 2013 Jun 24;8(6):e67336. doi: 10.1371/journal.pone.0067336. Print 2013.

27.

Distribution, functional impact, and origin mechanisms of copy number variation in the barley genome.

Muñoz-Amatriaín M, Eichten SR, Wicker T, Richmond TA, Mascher M, Steuernagel B, Scholz U, Ariyadasa R, Spannagl M, Nussbaumer T, Mayer KF, Taudien S, Platzer M, Jeddeloh JA, Springer NM, Muehlbauer GJ, Stein N.

Genome Biol. 2013 Jun 12;14(6):R58. doi: 10.1186/gb-2013-14-6-r58.

28.

Functional characterization of two clusters of Brachypodium distachyon UDP-glycosyltransferases encoding putative deoxynivalenol detoxification genes.

Schweiger W, Pasquet JC, Nussbaumer T, Paris MP, Wiesenberger G, Macadré C, Ametz C, Berthiller F, Lemmens M, Saindrenan P, Mewes HW, Mayer KF, Dufresne M, Adam G.

Mol Plant Microbe Interact. 2013 Jul;26(7):781-92. doi: 10.1094/MPMI-08-12-0205-R.

29.

MIPS PlantsDB: a database framework for comparative plant genome research.

Nussbaumer T, Martis MM, Roessner SK, Pfeifer M, Bader KC, Sharma S, Gundlach H, Spannagl M.

Nucleic Acids Res. 2013 Jan;41(Database issue):D1144-51. doi: 10.1093/nar/gks1153. Epub 2012 Nov 29.

30.

Time-resolved characterization of primary emissions from residential wood combustion appliances.

Heringa MF, DeCarlo PF, Chirico R, Lauber A, Doberer A, Good J, Nussbaumer T, Keller A, Burtscher H, Richard A, Miljevic B, Prevot AS, Baltensperger U.

Environ Sci Technol. 2012 Oct 16;46(20):11418-25. doi: 10.1021/es301654w. Epub 2012 Oct 4.

PMID:
22970884
31.

Unlocking the barley genome by chromosomal and comparative genomics.

Mayer KF, Martis M, Hedley PE, Simková H, Liu H, Morris JA, Steuernagel B, Taudien S, Roessner S, Gundlach H, Kubaláková M, Suchánková P, Murat F, Felder M, Nussbaumer T, Graner A, Salse J, Endo T, Sakai H, Tanaka T, Itoh T, Sato K, Platzer M, Matsumoto T, Scholz U, Dolezel J, Waugh R, Stein N.

Plant Cell. 2011 Apr;23(4):1249-63. doi: 10.1105/tpc.110.082537. Epub 2011 Apr 5.

32.

Oxidative potential of logwood and pellet burning particles assessed by a novel profluorescent nitroxide probe.

Miljevic B, Heringa MF, Keller A, Meyer NK, Good J, Lauber A, Decarlo PF, Fairfull-Smith KE, Nussbaumer T, Burtscher H, Prevot AS, Baltensperger U, Bottle SE, Ristovski ZD.

Environ Sci Technol. 2010 Sep 1;44(17):6601-7. doi: 10.1021/es100963y.

PMID:
20684503
33.

An assessment of microbiological water quality of six water source categories in north-east Uganda.

Parker AH, Youlten R, Dillon M, Nussbaumer T, Carter RC, Tyrrel SF, Webster J.

J Water Health. 2010 Sep;8(3):550-60. doi: 10.2166/wh.2010.128. Epub 2010 Mar 9.

PMID:
20375484
34.

2-(Diethylamino)ethanethiol, a new reagent for the odorless deprotection of aromatic methyl ethers.

Magano J, Chen MH, Clark JD, Nussbaumer T.

J Org Chem. 2006 Sep 1;71(18):7103-5.

PMID:
16930076
35.

Ru-catalyzed alkene-alkyne coupling. Total synthesis of amphidinolide P.

Trost BM, Papillon JP, Nussbaumer T.

J Am Chem Soc. 2005 Dec 21;127(50):17921-37.

36.

Multiple Andreev reflections in a carbon nanotube quantum dot.

Buitelaar MR, Belzig W, Nussbaumer T, Babić B, Bruder C, Schönenberger C.

Phys Rev Lett. 2003 Aug 1;91(5):057005. Epub 2003 Aug 1.

PMID:
12906627
37.

Quantum dot in the Kondo regime coupled to superconductors.

Buitelaar MR, Nussbaumer T, Schönenberger C.

Phys Rev Lett. 2002 Dec 16;89(25):256801. Epub 2002 Dec 4.

PMID:
12484909
38.

Multiwall carbon nanotubes as quantum dots.

Buitelaar MR, Bachtold A, Nussbaumer T, Iqbal M, Schönenberger C.

Phys Rev Lett. 2002 Apr 15;88(15):156801. Epub 2002 Mar 28.

PMID:
11955211
39.

Studies on the structure of alpha-1-acid glycoprotein.

SCHMID K, BENCZE WL, NUSSBAUMER T, WEHRMULLER JO.

J Biol Chem. 1959 Mar;234(3):529-33. No abstract available.

40.

[Surgical possibilities in the treatment of chronic pancreatitis].

HESS W, NUSSBAUMER T.

Rev Int Hepatol. 1955;5(6):827-51. French. No abstract available.

PMID:
13311107
41.
42.

[Juvenile and familial hemochromatosis with endocrinomyocardiac syndrome].

PLATTNER HC, NUSSBAUMER T, RYWLIN A.

Helv Med Acta. 1951 Oct;18(4-5):499-502. Undetermined Language. No abstract available.

PMID:
14873186
43.

Les capillaires du follicule tuberculeux et leur rôle dans la genèse des dellules géantes de Langhans.

NUSSBAUMER T.

Schweiz Z Tuberk. 1950;7(1):42-53. Undetermined Language. No abstract available.

PMID:
15406541

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