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Items: 15

1.

Sumoylation and phosphorylation: hidden and overt links.

Tomanov K, Nukarinen E, Vicente J, Mendiondo GM, Winter N, Nehlin L, Weckwerth W, Holdsworth MJ, Teige M, Bachmair A.

J Exp Bot. 2018 Aug 31;69(19):4583-4590. doi: 10.1093/jxb/ery167.

PMID:
29846689
2.

The SnRK1 Kinase as Central Mediator of Energy Signaling between Different Organelles.

Wurzinger B, Nukarinen E, Nägele T, Weckwerth W, Teige M.

Plant Physiol. 2018 Feb;176(2):1085-1094. doi: 10.1104/pp.17.01404. Epub 2018 Jan 8. Review. No abstract available.

3.

Redox state-dependent modulation of plant SnRK1 kinase activity differs from AMPK regulation in animals.

Wurzinger B, Mair A, Fischer-Schrader K, Nukarinen E, Roustan V, Weckwerth W, Teige M.

FEBS Lett. 2017 Nov;591(21):3625-3636. doi: 10.1002/1873-3468.12852. Epub 2017 Oct 4.

4.

Protein sumoylation and phosphorylation intersect in Arabidopsis signaling.

Nukarinen E, Tomanov K, Ziba I, Weckwerth W, Bachmair A.

Plant J. 2017 Aug;91(3):505-517. doi: 10.1111/tpj.13575. Epub 2017 Jun 4.

5.

Association of Matrix Metalloproteinases -7, -8 and -9 and TIMP -1 with Disease Severity in Acute Pancreatitis. A Cohort Study.

Nukarinen E, Lindström O, Kuuliala K, Kylänpää L, Pettilä V, Puolakkainen P, Kuuliala A, Hämäläinen M, Moilanen E, Repo H, Hästbacka J.

PLoS One. 2016 Aug 25;11(8):e0161480. doi: 10.1371/journal.pone.0161480. eCollection 2016.

6.

Quantitative phosphoproteomics reveals the role of the AMPK plant ortholog SnRK1 as a metabolic master regulator under energy deprivation.

Nukarinen E, Nägele T, Pedrotti L, Wurzinger B, Mair A, Landgraf R, Börnke F, Hanson J, Teige M, Baena-Gonzalez E, Dröge-Laser W, Weckwerth W.

Sci Rep. 2016 Aug 22;6:31697. doi: 10.1038/srep31697.

7.

System level analysis of cacao seed ripening reveals a sequential interplay of primary and secondary metabolism leading to polyphenol accumulation and preparation of stress resistance.

Wang L, Nägele T, Doerfler H, Fragner L, Chaturvedi P, Nukarinen E, Bellaire A, Huber W, Weiszmann J, Engelmeier D, Ramsak Z, Gruden K, Weckwerth W.

Plant J. 2016 Aug;87(3):318-32. doi: 10.1111/tpj.13201. Epub 2016 Aug 5.

8.

Effect of Inhaled Xenon on Cerebral White Matter Damage in Comatose Survivors of Out-of-Hospital Cardiac Arrest: A Randomized Clinical Trial.

Laitio R, Hynninen M, Arola O, Virtanen S, Parkkola R, Saunavaara J, Roine RO, Grönlund J, Ylikoski E, Wennervirta J, Bäcklund M, Silvasti P, Nukarinen E, Tiainen M, Saraste A, Pietilä M, Airaksinen J, Valanne L, Martola J, Silvennoinen H, Scheinin H, Harjola VP, Niiranen J, Korpi K, Varpula M, Inkinen O, Olkkola KT, Maze M, Vahlberg T, Laitio T.

JAMA. 2016 Mar 15;315(11):1120-8. doi: 10.1001/jama.2016.1933.

10.

Targeting matrix metalloproteinases with intravenous doxycycline in severe sepsis--A randomised placebo-controlled pilot trial.

Nukarinen E, Tervahartiala T, Valkonen M, Hynninen M, Kolho E, Pettilä V, Sorsa T, Backman J, Hästbacka J.

Pharmacol Res. 2015 Sep;99:44-51. doi: 10.1016/j.phrs.2015.05.005. Epub 2015 May 22.

PMID:
26008138
11.

A tandem affinity purification tag of TGA2 for isolation of interacting proteins in Arabidopsis thaliana.

Stotz HU, Findling S, Nukarinen E, Weckwerth W, Mueller MJ, Berger S.

Plant Signal Behav. 2014;9(10):e972794. doi: 10.4161/15592316.2014.972794.

12.

The low energy signaling network.

Tomé F, Nägele T, Adamo M, Garg A, Marco-Llorca C, Nukarinen E, Pedrotti L, Peviani A, Simeunovic A, Tatkiewicz A, Tomar M, Gamm M.

Front Plant Sci. 2014 Jul 17;5:353. doi: 10.3389/fpls.2014.00353. eCollection 2014. Review.

13.

A universal protocol for the combined isolation of metabolites, DNA, long RNAs, small RNAs, and proteins from plants and microorganisms.

Valledor L, Escandón M, Meijón M, Nukarinen E, Cañal MJ, Weckwerth W.

Plant J. 2014 Jul;79(1):173-80. doi: 10.1111/tpj.12546. Epub 2014 Jun 17.

14.

Boron nitride as desalting material in combination with phosphopeptide enrichment in shotgun proteomics.

Furuhashi T, Nukarinen E, Ota S, Weckwerth W.

Anal Biochem. 2014 May 1;452:16-8. doi: 10.1016/j.ab.2014.01.005. Epub 2014 Jan 23.

PMID:
24462817
15.

Identification of novel in vivo MAP kinase substrates in Arabidopsis thaliana through use of tandem metal oxide affinity chromatography.

Hoehenwarter W, Thomas M, Nukarinen E, Egelhofer V, Röhrig H, Weckwerth W, Conrath U, Beckers GJ.

Mol Cell Proteomics. 2013 Feb;12(2):369-80. doi: 10.1074/mcp.M112.020560. Epub 2012 Nov 20.

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