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Items: 1 to 50 of 424

1.

A rigorous measure of genome-wide genetic shuffling that takes into account crossover positions and Mendel's second law.

Veller C, Kleckner N, Nowak MA.

Proc Natl Acad Sci U S A. 2019 Jan 11. pii: 201817482. doi: 10.1073/pnas.1817482116. [Epub ahead of print]

PMID:
30635424
2.

Indirect reciprocity with optional games and monitoring of interactions between defectors.

Ghang W, Olejarz J, Nowak MA.

Math Biosci. 2018 Dec 6. pii: S0025-5564(18)30479-6. doi: 10.1016/j.mbs.2018.12.005. [Epub ahead of print]

PMID:
30529683
3.

Indirect reciprocity with private, noisy, and incomplete information.

Hilbe C, Schmid L, Tkadlec J, Chatterjee K, Nowak MA.

Proc Natl Acad Sci U S A. 2018 Nov 27;115(48):12241-12246. doi: 10.1073/pnas.1810565115. Epub 2018 Nov 14.

PMID:
30429320
4.

Construction of arbitrarily strong amplifiers of natural selection using evolutionary graph theory.

Pavlogiannis A, Tkadlec J, Chatterjee K, Nowak MA.

Commun Biol. 2018 Jun 14;1:71. doi: 10.1038/s42003-018-0078-7. eCollection 2018.

5.

On the pros and cons of using temporal derivatives to assess brain functional connectivity.

Ochab JK, Tarnowski W, Nowak MA, Chialvo DR.

Neuroimage. 2019 Jan 1;184:577-585. doi: 10.1016/j.neuroimage.2018.09.063. Epub 2018 Sep 26.

PMID:
30267855
6.

Minimal functional driver gene heterogeneity among untreated metastases.

Reiter JG, Makohon-Moore AP, Gerold JM, Heyde A, Attiyeh MA, Kohutek ZA, Tokheim CJ, Brown A, DeBlasio RM, Niyazov J, Zucker A, Karchin R, Kinzler KW, Iacobuzio-Donahue CA, Vogelstein B, Nowak MA.

Science. 2018 Sep 7;361(6406):1033-1037. doi: 10.1126/science.aat7171.

PMID:
30190408
7.

Precancerous neoplastic cells can move through the pancreatic ductal system.

Makohon-Moore AP, Matsukuma K, Zhang M, Reiter JG, Gerold JM, Jiao Y, Sikkema L, Attiyeh MA, Yachida S, Sandone C, Hruban RH, Klimstra DS, Papadopoulos N, Nowak MA, Kinzler KW, Vogelstein B, Iacobuzio-Donahue CA.

Nature. 2018 Sep;561(7722):201-205. doi: 10.1038/s41586-018-0481-8. Epub 2018 Sep 3.

PMID:
30177826
8.

Selection for synchronized cell division in simple multicellular organisms.

Olejarz J, Kaveh K, Veller C, Nowak MA.

J Theor Biol. 2018 Nov 14;457:170-179. doi: 10.1016/j.jtbi.2018.08.038. Epub 2018 Aug 30.

9.

Insight into treatment of HIV infection from viral dynamics models.

Hill AL, Rosenbloom DIS, Nowak MA, Siliciano RF.

Immunol Rev. 2018 Sep;285(1):9-25. doi: 10.1111/imr.12698.

10.

Evolution of cooperation in stochastic games.

Hilbe C, Šimsa Š, Chatterjee K, Nowak MA.

Nature. 2018 Jul;559(7713):246-249. doi: 10.1038/s41586-018-0277-x. Epub 2018 Jul 4.

PMID:
29973718
11.

Current CRISPR gene drive systems are likely to be highly invasive in wild populations.

Noble C, Adlam B, Church GM, Esvelt KM, Nowak MA.

Elife. 2018 Jun 19;7. pii: e33423. doi: 10.7554/eLife.33423.

12.

Language acquisition with communication between learners.

Ibsen-Jensen R, Tkadlec J, Chatterjee K, Nowak MA.

J R Soc Interface. 2018 Mar;15(140). pii: 20180073. doi: 10.1098/rsif.2018.0073.

PMID:
29593089
13.

Primordial sex facilitates the emergence of evolution.

Sinai S, Olejarz J, Neagu IA, Nowak MA.

J R Soc Interface. 2018 Feb;15(139). pii: 20180003. doi: 10.1098/rsif.2018.0003.

PMID:
29491181
14.

Life cycle synchronization is a viral drug resistance mechanism.

Neagu IA, Olejarz J, Freeman M, Rosenbloom DIS, Nowak MA, Hill AL.

PLoS Comput Biol. 2018 Feb 15;14(2):e1005947. doi: 10.1371/journal.pcbi.1005947. eCollection 2018 Feb.

15.

Crosstalk in concurrent repeated games impedes direct reciprocity and requires stronger levels of forgiveness.

Reiter JG, Hilbe C, Rand DG, Chatterjee K, Nowak MA.

Nat Commun. 2018 Feb 7;9(1):555. doi: 10.1038/s41467-017-02721-8.

16.

Public goods games in populations with fluctuating size.

McAvoy A, Fraiman N, Hauert C, Wakeley J, Nowak MA.

Theor Popul Biol. 2018 May;121:72-84. doi: 10.1016/j.tpb.2018.01.004. Epub 2018 Feb 2.

PMID:
29408219
17.

Complete diagrammatics of the single-ring theorem.

Nowak MA, Tarnowski W.

Phys Rev E. 2017 Oct;96(4-1):042149. doi: 10.1103/PhysRevE.96.042149. Epub 2017 Oct 24.

PMID:
29347552
18.

Development of an oral once-weekly drug delivery system for HIV antiretroviral therapy.

Kirtane AR, Abouzid O, Minahan D, Bensel T, Hill AL, Selinger C, Bershteyn A, Craig M, Mo SS, Mazdiyasni H, Cleveland C, Rogner J, Lee YL, Booth L, Javid F, Wu SJ, Grant T, Bellinger AM, Nikolic B, Hayward A, Wood L, Eckhoff PA, Nowak MA, Langer R, Traverso G.

Nat Commun. 2018 Jan 9;9(1):2. doi: 10.1038/s41467-017-02294-6.

19.

A case of leprosy in central Florida.

Anderson KL, Minni JP, Nowak MA, Karai LJ, Sanik E.

Cutis. 2017 Nov;100(5):327-329.

PMID:
29232423
20.

How Virtue Was Born.

Nowak MA, Sigmund K.

Gerontology. 2018;64(2):201-204. doi: 10.1159/000484479. Epub 2017 Dec 6.

PMID:
29207393
21.

The evolution of queen control over worker reproduction in the social Hymenoptera.

Olejarz J, Veller C, Nowak MA.

Ecol Evol. 2017 Sep 10;7(20):8427-8441. doi: 10.1002/ece3.3324. eCollection 2017 Oct.

22.

Erratum: An exactly solvable, spatial model of mutation accumulation in cancer.

Paterson C, Nowak MA, Waclaw B.

Sci Rep. 2017 Oct 20;7:46900. doi: 10.1038/srep46900.

23.

Effects of motion in structured populations.

Krieger MS, McAvoy A, Nowak MA.

J R Soc Interface. 2017 Oct;14(135). pii: 20170509. doi: 10.1098/rsif.2017.0509.

24.

Drift-Induced Selection Between Male and Female Heterogamety.

Veller C, Muralidhar P, Constable GWA, Nowak MA.

Genetics. 2017 Oct;207(2):711-727. doi: 10.1534/genetics.117.300151. Epub 2017 Aug 16.

25.

Prebiotic selection for motifs in a model of template-free elongation of polymers within compartments.

Kinsler G, Sinai S, Lee NK, Nowak MA.

PLoS One. 2017 Jul 19;12(7):e0180208. doi: 10.1371/journal.pone.0180208. eCollection 2017.

26.

Origins of lymphatic and distant metastases in human colorectal cancer.

Naxerova K, Reiter JG, Brachtel E, Lennerz JK, van de Wetering M, Rowan A, Cai T, Clevers H, Swanton C, Nowak MA, Elledge SJ, Jain RK.

Science. 2017 Jul 7;357(6346):55-60. doi: 10.1126/science.aai8515.

27.

The Red Queen and King in finite populations.

Veller C, Hayward LK, Hilbe C, Nowak MA.

Proc Natl Acad Sci U S A. 2017 Jul 3;114(27):E5396-E5405. doi: 10.1073/pnas.1702020114. Epub 2017 Jun 19.

28.

The timetable of evolution.

Knoll AH, Nowak MA.

Sci Adv. 2017 May 17;3(5):e1603076. doi: 10.1126/sciadv.1603076. eCollection 2017 May. Review.

29.

The general form of Hamilton's rule makes no predictions and cannot be tested empirically.

Nowak MA, McAvoy A, Allen B, Wilson EO.

Proc Natl Acad Sci U S A. 2017 May 30;114(22):5665-5670. doi: 10.1073/pnas.1701805114. Epub 2017 May 16.

30.

Evolutionary dynamics of CRISPR gene drives.

Noble C, Olejarz J, Esvelt KM, Church GM, Nowak MA.

Sci Adv. 2017 Apr 5;3(4):e1601964. doi: 10.1126/sciadv.1601964. eCollection 2017 Apr.

31.

Memory-n strategies of direct reciprocity.

Hilbe C, Martinez-Vaquero LA, Chatterjee K, Nowak MA.

Proc Natl Acad Sci U S A. 2017 May 2;114(18):4715-4720. doi: 10.1073/pnas.1621239114. Epub 2017 Apr 18.

32.

Evolutionary dynamics on any population structure.

Allen B, Lippner G, Chen YT, Fotouhi B, Momeni N, Yau ST, Nowak MA.

Nature. 2017 Apr 13;544(7649):227-230. doi: 10.1038/nature21723. Epub 2017 Mar 29.

PMID:
28355181
33.

Development of a bedside scoring system for predicting a first recurrence of Clostridium difficile-associated diarrhea.

Viswesh V, Hincapie AL, Yu M, Khatchatourian L, Nowak MA.

Am J Health Syst Pharm. 2017 Apr 1;74(7):474-482. doi: 10.2146/ajhp160186.

PMID:
28336757
34.

Genes, environment, and "bad luck".

Nowak MA, Waclaw B.

Science. 2017 Mar 24;355(6331):1266-1267. doi: 10.1126/science.aam9746. No abstract available.

PMID:
28336626
35.

Evolutionary games on cycles with strong selection.

Altrock PM, Traulsen A, Nowak MA.

Phys Rev E. 2017 Feb;95(2-1):022407. doi: 10.1103/PhysRevE.95.022407. Epub 2017 Feb 13.

PMID:
28297871
36.

Amplification on Undirected Population Structures: Comets Beat Stars.

Pavlogiannis A, Tkadlec J, Chatterjee K, Nowak MA.

Sci Rep. 2017 Mar 6;7(1):82. doi: 10.1038/s41598-017-00107-w.

37.

Reconstructing metastatic seeding patterns of human cancers.

Reiter JG, Makohon-Moore AP, Gerold JM, Bozic I, Chatterjee K, Iacobuzio-Donahue CA, Vogelstein B, Nowak MA.

Nat Commun. 2017 Jan 31;8:14114. doi: 10.1038/ncomms14114.

38.

Limited heterogeneity of known driver gene mutations among the metastases of individual patients with pancreatic cancer.

Makohon-Moore AP, Zhang M, Reiter JG, Bozic I, Allen B, Kundu D, Chatterjee K, Wong F, Jiao Y, Kohutek ZA, Hong J, Attiyeh M, Javier B, Wood LD, Hruban RH, Nowak MA, Papadopoulos N, Kinzler KW, Vogelstein B, Iacobuzio-Donahue CA.

Nat Genet. 2017 Mar;49(3):358-366. doi: 10.1038/ng.3764. Epub 2017 Jan 16.

39.

Fixation Probabilities for Any Configuration of Two Strategies on Regular Graphs.

Chen YT, McAvoy A, Nowak MA.

Sci Rep. 2016 Dec 22;6:39181. doi: 10.1038/srep39181.

40.

An exactly solvable, spatial model of mutation accumulation in cancer.

Paterson C, Nowak MA, Waclaw B.

Sci Rep. 2016 Dec 22;6:39511. doi: 10.1038/srep39511. Erratum in: Sci Rep. 2017 Oct 20;7:46900.

41.

Think global, act local: Preserving the global commons.

Hauser OP, Hendriks A, Rand DG, Nowak MA.

Sci Rep. 2016 Nov 3;6:36079. doi: 10.1038/srep36079.

42.

Uncalculating cooperation is used to signal trustworthiness.

Jordan JJ, Hoffman M, Nowak MA, Rand DG.

Proc Natl Acad Sci U S A. 2016 Jul 20;113(31):8658-63. doi: 10.1073/pnas.1601280113.

43.

Tumour and immune cell dynamics explain the PSA bounce after prostate cancer brachytherapy.

Yamamoto Y, Offord CP, Kimura G, Kuribayashi S, Takeda H, Tsuchiya S, Shimojo H, Kanno H, Bozic I, Nowak MA, Bajzer Ž, Dingli D.

Br J Cancer. 2016 Jul 12;115(2):195-202. doi: 10.1038/bjc.2016.171.

44.

Clonal evolution in patients with chronic lymphocytic leukaemia developing resistance to BTK inhibition.

Burger JA, Landau DA, Taylor-Weiner A, Bozic I, Zhang H, Sarosiek K, Wang L, Stewart C, Fan J, Hoellenriegel J, Sivina M, Dubuc AM, Fraser C, Han Y, Li S, Livak KJ, Zou L, Wan Y, Konoplev S, Sougnez C, Brown JR, Abruzzo LV, Carter SL, Keating MJ, Davids MS, Wierda WG, Cibulskis K, Zenz T, Werner L, Dal Cin P, Kharchencko P, Neuberg D, Kantarjian H, Lander E, Gabriel S, O'Brien S, Letai A, Weitz DA, Nowak MA, Getz G, Wu CJ.

Nat Commun. 2016 May 20;7:11589. doi: 10.1038/ncomms11589.

45.

Games of multicellularity.

Kaveh K, Veller C, Nowak MA.

J Theor Biol. 2016 Aug 21;403:143-158. doi: 10.1016/j.jtbi.2016.04.037. Epub 2016 May 12.

PMID:
27179461
46.

The Trivers-Willard hypothesis: sex ratio or investment?

Veller C, Haig D, Nowak MA.

Proc Biol Sci. 2016 May 11;283(1830). pii: 20160126. doi: 10.1098/rspb.2016.0126.

47.

Comparing reactive and memory-one strategies of direct reciprocity.

Baek SK, Jeong HC, Hilbe C, Nowak MA.

Sci Rep. 2016 May 10;6:25676. doi: 10.1038/srep25676.

48.

Dynamics of prebiotic RNA reproduction illuminated by chemical game theory.

Yeates JA, Hilbe C, Zwick M, Nowak MA, Lehman N.

Proc Natl Acad Sci U S A. 2016 May 3;113(18):5030-5. doi: 10.1073/pnas.1525273113. Epub 2016 Apr 18.

49.

Evolution of worker policing.

Olejarz JW, Allen B, Veller C, Gadagkar R, Nowak MA.

J Theor Biol. 2016 Jun 21;399:103-16. doi: 10.1016/j.jtbi.2016.03.001. Epub 2016 Mar 11.

PMID:
26976051
50.

Phenotypic Heterogeneity and the Evolution of Bacterial Life Cycles.

van Gestel J, Nowak MA.

PLoS Comput Biol. 2016 Feb 19;12(2):e1004764. doi: 10.1371/journal.pcbi.1004764. eCollection 2016 Feb.

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