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Items: 1 to 50 of 56

1.

Selective Factors Associated with the Evolution of Codon Usage in Natural Populations of Arboviruses.

Velazquez-Salinas L, Zarate S, Eschbaumer M, Pereira Lobo F, Gladue DP, Arzt J, Novella IS, Rodriguez LL.

PLoS One. 2016 Jul 25;11(7):e0159943. doi: 10.1371/journal.pone.0159943. eCollection 2016.

2.

Antigenic diversification is correlated with increased thermostability in a mammalian virus.

Presloid JB, Mohammad TF, Lauring AS, Novella IS.

Virology. 2016 Sep;496:203-214. doi: 10.1016/j.virol.2016.06.009. Epub 2016 Jun 23.

3.

RNA Viruses and RNAi: Quasispecies Implications for Viral Escape.

Presloid JB, Novella IS.

Viruses. 2015 Jun 19;7(6):3226-40. doi: 10.3390/v7062768. Review.

4.

RNA replication errors and the evolution of virus pathogenicity and virulence.

Novella IS, Presloid JB, Taylor RT.

Curr Opin Virol. 2014 Dec;9:143-7. doi: 10.1016/j.coviro.2014.09.017. Epub 2014 Oct 22. Review.

PMID:
25462446
5.

Congruent evolution of fitness and genetic robustness in vesicular stomatitis virus.

Novella IS, Presloid JB, Beech C, Wilke CO.

J Virol. 2013 May;87(9):4923-8. doi: 10.1128/JVI.02796-12. Epub 2013 Feb 13.

6.

The role of environmental factors on the evolution of phenotypic diversity in vesicular stomatitis virus populations.

Smith-Tsurkan SD, Herr RA, Khuder S, Wilke CO, Novella IS.

J Gen Virol. 2013 Apr;94(Pt 4):860-8. doi: 10.1099/vir.0.048082-0. Epub 2012 Dec 12.

7.

Specific and nonspecific host adaptation during arboviral experimental evolution.

Novella IS, Presloid JB, Smith SD, Wilke CO.

J Mol Microbiol Biotechnol. 2011;21(1-2):71-81. doi: 10.1159/000332752. Epub 2012 Jan 13. Review.

8.

Genomic evolution of vesicular stomatitis virus strains with differences in adaptability.

Novella IS, Presloid JB, Zhou T, Smith-Tsurkan SD, Ebendick-Corpus BE, Dutta RN, Lust KL, Wilke CO.

J Virol. 2010 May;84(10):4960-8. doi: 10.1128/JVI.00710-09. Epub 2010 Feb 24.

9.

Incongruent fitness landscapes, not tradeoffs, dominate the adaptation of vesicular stomatitis virus to novel host types.

Smith-Tsurkan SD, Wilke CO, Novella IS.

J Gen Virol. 2010 Jun;91(Pt 6):1484-93. doi: 10.1099/vir.0.017855-0. Epub 2010 Jan 27.

10.

The rhabdoviruses: biodiversity, phylogenetics, and evolution.

Kuzmin IV, Novella IS, Dietzgen RG, Padhi A, Rupprecht CE.

Infect Genet Evol. 2009 Jul;9(4):541-53. doi: 10.1016/j.meegid.2009.02.005. Epub 2009 Feb 24. Review.

PMID:
19460320
11.

A linear relationship between fitness and the logarithm of the critical bottleneck size in vesicular stomatitis virus populations.

Novella IS, Dutta RN, Wilke CO.

J Virol. 2008 Dec;82(24):12589-90. doi: 10.1128/JVI.01394-08. Epub 2008 Oct 1.

12.

Antagonistic pleiotropy involving promoter sequences in a virus.

Presloid JB, Ebendick-Corpus BE, Zárate S, Novella IS.

J Mol Biol. 2008 Oct 3;382(2):342-52. doi: 10.1016/j.jmb.2008.06.080. Epub 2008 Jul 3.

13.

Rapid adaptive amplification of preexisting variation in an RNA virus.

Dutta RN, Rouzine IM, Smith SD, Wilke CO, Novella IS.

J Virol. 2008 May;82(9):4354-62. doi: 10.1128/JVI.02446-07. Epub 2008 Feb 20.

14.

Emergence of mammalian cell-adapted vesicular stomatitis virus from persistent infections of insect vector cells.

Novella IS, Ebendick-Corpus BE, Zárate S, Miller EL.

J Virol. 2007 Jun;81(12):6664-8. Epub 2007 Apr 11.

15.

Quasispecies in time-dependent environments.

Wilke CO, Forster R, Novella IS.

Curr Top Microbiol Immunol. 2006;299:33-50. Review.

PMID:
16568895
16.

Comparison of Bacillus subtilis and Serratia marcescens as protease producers under different operating conditions.

Longo MA, Novella IS, Garcia LA, Diaz M.

J Biosci Bioeng. 1999;88(1):35-40.

PMID:
16232570
17.

Adaptability costs in immune escape variants of vesicular stomatitis virus.

Novella IS, Gilbertson DL, Borrego B, Domingo E, Holland JJ.

Virus Res. 2005 Jan;107(1):27-34.

PMID:
15567030
19.

Molecular basis of fitness loss and fitness recovery in vesicular stomatitis virus.

Novella IS, Ebendick-Corpus BE.

J Mol Biol. 2004 Oct 1;342(5):1423-30.

PMID:
15364571
20.

Positive selection of synonymous mutations in vesicular stomatitis virus.

Novella IS, Zárate S, Metzgar D, Ebendick-Corpus BE.

J Mol Biol. 2004 Oct 1;342(5):1415-21.

PMID:
15364570
21.
22.
23.

Density-dependent selection in vesicular stomatitis virus.

Novella IS, Reissig DD, Wilke CO.

J Virol. 2004 Jun;78(11):5799-804. Erratum in: J Virol. 2006 Apr;80(8):4207.

24.
25.

Contributions of vesicular stomatitis virus to the understanding of RNA virus evolution.

Novella IS.

Curr Opin Microbiol. 2003 Aug;6(4):399-405. Review.

PMID:
12941412
26.
27.

Quantifying viral propagation in vitro: toward a method for characterization of complex phenotypes.

Duca KA, Lam V, Keren I, Endler EE, Letchworth GJ, Novella IS, Yin J.

Biotechnol Prog. 2001 Nov-Dec;17(6):1156-65.

PMID:
11735454
28.

Contingent neutrality in competing viral populations.

Quer J, Hershey CL, Domingo E, Holland JJ, Novella IS.

J Virol. 2001 Aug;75(16):7315-20.

29.
30.

Lack of evolutionary stasis during alternating replication of an arbovirus in insect and mammalian cells.

Novella IS, Hershey CL, Escarmis C, Domingo E, Holland JJ.

J Mol Biol. 1999 Apr 2;287(3):459-65.

PMID:
10092452
31.

Exponential fitness gains of RNA virus populations are limited by bottleneck effects.

Novella IS, Quer J, Domingo E, Holland JJ.

J Virol. 1999 Feb;73(2):1668-71.

32.

EVOLUTIONARY DYNAMICS OF FITNESS RECOVERY FROM THE DEBILITATING EFFECTS OF MULLER'S RATCHET.

Elena SF, Dávila M, Novella IS, Holland JJ, Domingo E, Moya A.

Evolution. 1998 Apr;52(2):309-314. doi: 10.1111/j.1558-5646.1998.tb01633.x.

PMID:
28568345
33.

Negative effects of chemical mutagenesis on the adaptive behavior of vesicular stomatitis virus.

Lee CH, Gilbertson DL, Novella IS, Huerta R, Domingo E, Holland JJ.

J Virol. 1997 May;71(5):3636-40.

34.

Viral quasispecies and the problem of vaccine-escape and drug-resistant mutants.

Domingo E, Menéndez-Arias L, Quiñones-Mateu ME, Holguín A, Gutiérrez-Rivas M, Martínez MA, Quer J, Novella IS, Holland JJ.

Prog Drug Res. 1997;48:99-128. Review. No abstract available.

PMID:
9204684
35.

Reproducible nonlinear population dynamics and critical points during replicative competitions of RNA virus quasispecies.

Quer J, Huerta R, Novella IS, Tsimring L, Domingo E, Holland JJ.

J Mol Biol. 1996 Dec 6;264(3):465-71.

PMID:
8969298
36.

Repeated transfer of small RNA virus populations leading to balanced fitness with infrequent stochastic drift.

Novella IS, Elena SF, Moya A, Domingo E, Holland JJ.

Mol Gen Genet. 1996 Oct 28;252(6):733-8.

PMID:
8917317
37.

Large-population passages of vesicular stomatitis virus in interferon-treated cells select variants of only limited resistance.

Novella IS, Cilnis M, Elena SF, Kohn J, Moya A, Domingo E, Holland JJ.

J Virol. 1996 Sep;70(9):6414-7.

38.

Basic concepts in RNA virus evolution.

Domingo E, Escarmís C, Sevilla N, Moya A, Elena SF, Quer J, Novella IS, Holland JJ.

FASEB J. 1996 Jun;10(8):859-64. Review.

PMID:
8666162
39.

Evolution of fitness in experimental populations of vesicular stomatitis virus.

Elena SF, González-Candelas F, Novella IS, Duarte EA, Clarke DK, Domingo E, Holland JJ, Moya A.

Genetics. 1996 Mar;142(3):673-9.

40.

Restriction analysis of actinomycetes chromosomal DNA.

Novella IS, Marín I, Sánchez J.

Can J Microbiol. 1996 Feb;42(2):201-6.

PMID:
8742360
41.

Effects of 5-azacytidine on physiological differentiation of Streptomyces antibioticus.

Novella IS, Sánchez J.

Res Microbiol. 1995 Nov-Dec;146(9):721-8.

PMID:
8584794
42.

Extreme fitness differences in mammalian and insect hosts after continuous replication of vesicular stomatitis virus in sandfly cells.

Novella IS, Clarke DK, Quer J, Duarte EA, Lee CH, Weaver SC, Elena SF, Moya A, Domingo E, Holland JJ.

J Virol. 1995 Nov;69(11):6805-9.

43.

Rapid viral quasispecies evolution: implications for vaccine and drug strategies.

Novella IS, Domingo E, Holland JJ.

Mol Med Today. 1995 Aug;1(5):248-53. Review.

PMID:
17607887
44.

Exponential increases of RNA virus fitness during large population transmissions.

Novella IS, Duarte EA, Elena SF, Moya A, Domingo E, Holland JJ.

Proc Natl Acad Sci U S A. 1995 Jun 20;92(13):5841-4.

45.

Effect of 5-azacytidine and sinefungin on Streptomyces development.

Fernandez M, Soliveri J, Novella IS, Yebra MJ, Barbés C, Sánchez J.

Gene. 1995 May 19;157(1-2):221-3.

PMID:
7541762
46.

Size of genetic bottlenecks leading to virus fitness loss is determined by mean initial population fitness.

Novella IS, Elena SF, Moya A, Domingo E, Holland JJ.

J Virol. 1995 May;69(5):2869-72.

47.
48.

RNA virus quasispecies: significance for viral disease and epidemiology.

Duarte EA, Novella IS, Weaver SC, Domingo E, Wain-Hobson S, Clarke DK, Moya A, Elena SF, de la Torre JC, Holland JJ.

Infect Agents Dis. 1994 Aug;3(4):201-14. Review.

PMID:
7827789
49.

Improvement of the extraction of penicillin acylase from Escherichia coli cells by a combined use of chemical methods.

Novella IS, Fargues C, Grévillot G.

Biotechnol Bioeng. 1994 Jul;44(3):379-82.

PMID:
18618755
50.

Subclonal components of consensus fitness in an RNA virus clone.

Duarte EA, Novella IS, Ledesma S, Clarke DK, Moya A, Elena SF, Domingo E, Holland JJ.

J Virol. 1994 Jul;68(7):4295-301.

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