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Items: 44

1.

Comparing flow cytometry with culture-based methods for microbial monitoring and as a diagnostic tool for assessing drinking water treatment processes.

Cheswick R, Cartmell E, Lee S, Upton A, Weir P, Moore G, Nocker A, Jefferson B, Jarvis P.

Environ Int. 2019 Jun 18;130:104893. doi: 10.1016/j.envint.2019.06.003. [Epub ahead of print]

2.

Effect of turbidity on water disinfection by chlorination with the emphasis on humic acids and chalk.

Léziart T, Dutheil de la Rochere PM, Cheswick R, Jarvis P, Nocker A.

Environ Technol. 2019 May;40(13):1734-1743. doi: 10.1080/09593330.2019.1585480. Epub 2019 Mar 21.

PMID:
30777799
3.

Optimization of viability qPCR for selective detection of membrane-intact Legionella pneumophila.

Kontchou JA, Nocker A.

J Microbiol Methods. 2019 Jan;156:68-76. doi: 10.1016/j.mimet.2018.12.003. Epub 2018 Dec 5.

PMID:
30529241
4.

Flow cytometry-based evaluation of the bacterial removal efficiency of a blackwater reuse treatment plant and the microbiological changes in the associated non-potable distribution network.

Whitton R, Fane S, Jarvis P, Tupper M, Raffin M, Coulon F, Nocker A.

Sci Total Environ. 2018 Dec 15;645:1620-1629. doi: 10.1016/j.scitotenv.2018.07.121. Epub 2018 Jul 26.

PMID:
30248879
5.

Assessment of UV-C-induced water disinfection by differential PCR-based quantification of bacterial DNA damage.

Nocker A, Shah M, Dannenmann B, Schulze-Osthoff K, Wingender J, Probst AJ.

J Microbiol Methods. 2018 Jun;149:89-95. doi: 10.1016/j.mimet.2018.03.007. Epub 2018 Mar 31. No abstract available.

PMID:
29608927
6.

The absence or presence of a lytic coliphage affects the response of Escherichia coli to heat, chlorine, or UV exposure.

Ameh EM, Tyrrel S, Harris J, Ignatiou A, Orlova E, Nocker A.

Folia Microbiol (Praha). 2018 Sep;63(5):599-606. doi: 10.1007/s12223-018-0600-9. Epub 2018 Mar 15.

PMID:
29546616
7.

Turbidity composition and the relationship with microbial attachment and UV inactivation efficacy.

Farrell C, Hassard F, Jefferson B, Leziart T, Nocker A, Jarvis P.

Sci Total Environ. 2018 May 15;624:638-647. doi: 10.1016/j.scitotenv.2017.12.173. Epub 2017 Dec 27.

8.

Schrödinger's microbes: Tools for distinguishing the living from the dead in microbial ecosystems.

Emerson JB, Adams RI, Román CMB, Brooks B, Coil DA, Dahlhausen K, Ganz HH, Hartmann EM, Hsu T, Justice NB, Paulino-Lima IG, Luongo JC, Lymperopoulou DS, Gomez-Silvan C, Rothschild-Mancinelli B, Balk M, Huttenhower C, Nocker A, Vaishampayan P, Rothschild LJ.

Microbiome. 2017 Aug 16;5(1):86. doi: 10.1186/s40168-017-0285-3. Review.

9.

The feasibility of improved live-dead distinction in qPCR-based microbial source tracking.

Seidel L, Strathmann M, Nocker A.

J Microbiol Methods. 2017 Sep;140:23-31. doi: 10.1016/j.mimet.2017.06.013. Epub 2017 Jun 15.

PMID:
28625705
10.

When are bacteria dead? A step towards interpreting flow cytometry profiles after chlorine disinfection and membrane integrity staining.

Nocker A, Cheswick R, Dutheil de la Rochere PM, Denis M, Léziart T, Jarvis P.

Environ Technol. 2017 Apr;38(7):891-900. doi: 10.1080/09593330.2016.1262463. Epub 2016 Dec 5.

PMID:
27852151
11.

Impact of Treated Sewage Effluent on the Microbiology of a Small Brook Using Flow Cytometry as a Diagnostic Tool.

Harry IS, Ameh E, Coulon F, Nocker A.

Water Air Soil Pollut. 2016;227:57. Epub 2016 Jan 22.

12.

Antimicrobial properties of magnesium chloride at low pH in the presence of anionic bases.

Oyarzúa Alarcón P, Sossa K, Contreras D, Urrutia H, Nocker A.

Magnes Res. 2014 Apr-Jun;27(2):57-68. doi: 10.1684/mrh.2014.0362.

13.

Assessing microbiological water quality in drinking water distribution systems with disinfectant residual using flow cytometry.

Gillespie S, Lipphaus P, Green J, Parsons S, Weir P, Juskowiak K, Jefferson B, Jarvis P, Nocker A.

Water Res. 2014 Nov 15;65:224-34. doi: 10.1016/j.watres.2014.07.029. Epub 2014 Jul 30.

PMID:
25123436
14.

Microbiological tap water profile of a medium-sized building and effect of water stagnation.

Lipphaus P, Hammes F, Kötzsch S, Green J, Gillespie S, Nocker A.

Environ Technol. 2014 Mar-Apr;35(5-8):620-8.

PMID:
24645441
15.

Opportunities and limitations of molecular methods for quantifying microbial compliance parameters in EU bathing waters.

Oliver DM, van Niekerk M, Kay D, Heathwaite AL, Porter J, Fleming LE, Kinzelman JL, Connolly E, Cummins A, McPhail C, Rahman A, Thairs T, de Roda Husman AM, Hanley ND, Dunhill I, Globevnik L, Harwood VJ, Hodgson CJ, Lees DN, Nichols GL, Nocker A, Schets C, Quilliam RS.

Environ Int. 2014 Mar;64:124-8. doi: 10.1016/j.envint.2013.12.016. Epub 2014 Jan 4.

16.

Quantification of relative proportions of intact cells in microbiological samples using the example of Cryptosporidium parvum oocysts.

Agulló-Barceló M, Moss JA, Green J, Gillespie S, Codony F, Lucena F, Nocker A.

Lett Appl Microbiol. 2014 Jan;58(1):70-8. doi: 10.1111/lam.12157. Epub 2013 Sep 30.

17.

Effect of acidic pH on flow cytometric detection of bacteria stained with SYBR Green I and their distinction from background.

Baldock D, Nebe-von-Caron G, Bongaerts R, Nocker A.

Methods Appl Fluoresc. 2013 Jul 29;1(4):045001. doi: 10.1088/2050-6120/1/4/045001.

PMID:
29148447
18.

Evaluation of engineered nanoparticle toxic effect on wastewater microorganisms: current status and challenges.

Eduok S, Martin B, Villa R, Nocker A, Jefferson B, Coulon F.

Ecotoxicol Environ Saf. 2013 Sep;95:1-9. doi: 10.1016/j.ecoenv.2013.05.022. Epub 2013 Jun 14. Review.

PMID:
23769127
19.

Improving efficiency of viability-PCR for selective detection of live cells.

Nkuipou-Kenfack E, Engel H, Fakih S, Nocker A.

J Microbiol Methods. 2013 Apr;93(1):20-4. doi: 10.1016/j.mimet.2013.01.018. Epub 2013 Feb 4.

PMID:
23389080
20.

Use of propidium monoazide and increased amplicon length reduce false-positive signals in quantitative PCR for bioburden analysis.

Schnetzinger F, Pan Y, Nocker A.

Appl Microbiol Biotechnol. 2013 Mar;97(5):2153-62. doi: 10.1007/s00253-013-4711-6. Epub 2013 Jan 26.

PMID:
23354451
21.

Progress in understanding preferential detection of live cells using viability dyes in combination with DNA amplification.

Fittipaldi M, Nocker A, Codony F.

J Microbiol Methods. 2012 Nov;91(2):276-89. doi: 10.1016/j.mimet.2012.08.007. Epub 2012 Aug 23. Review.

PMID:
22940102
22.

Effect of air drying on bacterial viability: A multiparameter viability assessment.

Nocker A, Fernández PS, Montijn R, Schuren F.

J Microbiol Methods. 2012 Aug;90(2):86-95. doi: 10.1016/j.mimet.2012.04.015. Epub 2012 May 1.

PMID:
22575714
23.

Effect of PCR amplicon length on suppressing signals from membrane-compromised cells by propidium monoazide treatment.

Contreras PJ, Urrutia H, Sossa K, Nocker A.

J Microbiol Methods. 2011 Oct;87(1):89-95. doi: 10.1016/j.mimet.2011.07.016. Epub 2011 Jul 28.

PMID:
21821068
24.

Multiparameter viability assay for stress profiling applied to the food pathogen Listeria monocytogenes F2365.

Nocker A, Caspers M, Esveld-Amanatidou A, van der Vossen J, Schuren F, Montijn R, Kort R.

Appl Environ Microbiol. 2011 Sep;77(18):6433-40. doi: 10.1128/AEM.00142-11. Epub 2011 Jul 15.

25.

Quantification of viable Legionella pneumophila cells using propidium monoazide combined with quantitative PCR.

Yáñez MA, Nocker A, Soria-Soria E, Múrtula R, Martínez L, Catalán V.

J Microbiol Methods. 2011 May;85(2):124-30. doi: 10.1016/j.mimet.2011.02.004. Epub 2011 Feb 15.

PMID:
21329735
26.

Discrimination between live and dead cellsin bacterial communities from environmental water samples analyzed by 454 pyrosequencing.

Nocker A, Richter-Heitmann T, Montijn R, Schuren F, Kort R.

Int Microbiol. 2010 Jun;13(2):59-65.

27.

Real-time detection of viable microorganisms by intracellular phototautomerism.

Kort R, Nocker A, de Kat Angelino-Bart A, van Veen S, Verheij H, Schuren F, Montijn R.

BMC Biotechnol. 2010 Jun 18;10:45. doi: 10.1186/1472-6750-10-45.

28.

Mycobacterium avium subsp. paratuberculosis viability determination using F57 quantitative PCR in combination with propidium monoazide treatment.

Kralik P, Nocker A, Pavlik I.

Int J Food Microbiol. 2010 Jul 31;141 Suppl 1:S80-6. doi: 10.1016/j.ijfoodmicro.2010.03.018. Epub 2010 Mar 19.

PMID:
20385417
29.

Retention of a model pathogen in a porous media biofilm.

Bauman WJ, Nocker A, Jones WL, Camper AK.

Biofouling. 2009;25(3):229-40. doi: 10.1080/08927010802688566.

PMID:
19173097
30.

Selective detection of live bacteria combining propidium monoazide sample treatment with microarray technology.

Nocker A, Mazza A, Masson L, Camper AK, Brousseau R.

J Microbiol Methods. 2009 Mar;76(3):253-61. doi: 10.1016/j.mimet.2008.11.004. Epub 2008 Dec 7.

PMID:
19103234
31.

Novel approaches toward preferential detection of viable cells using nucleic acid amplification techniques.

Nocker A, Camper AK.

FEMS Microbiol Lett. 2009 Feb;291(2):137-42. doi: 10.1111/j.1574-6968.2008.01429.x. Epub 2008 Nov 21. Review.

32.

Use of propidium monoazide for live/dead distinction in microbial ecology.

Nocker A, Sossa-Fernandez P, Burr MD, Camper AK.

Appl Environ Microbiol. 2007 Aug;73(16):5111-7. Epub 2007 Jun 22.

33.

Molecular monitoring of disinfection efficacy using propidium monoazide in combination with quantitative PCR.

Nocker A, Sossa KE, Camper AK.

J Microbiol Methods. 2007 Aug;70(2):252-60. Epub 2007 May 1.

PMID:
17544161
34.

Response of estuarine biofilm microbial community development to changes in dissolved oxygen and nutrient concentrations.

Nocker A, Lepo JE, Martin LL, Snyder RA.

Microb Ecol. 2007 Oct;54(3):532-42. Epub 2007 Mar 10.

PMID:
17351811
35.

Genotypic microbial community profiling: a critical technical review.

Nocker A, Burr M, Camper AK.

Microb Ecol. 2007 Aug;54(2):276-89. Epub 2007 Mar 8. Review.

PMID:
17345133
36.

Possible errors in the interpretation of ethidium bromide and PicoGreen DNA staining results from ethidium monoazide-treated DNA.

Hein I, Flekna G, Wagner M, Nocker A, Camper AK.

Appl Environ Microbiol. 2006 Oct;72(10):6860-1; author reply 6861-2. No abstract available.

37.

Stability and change in estuarine biofilm bacterial community diversity.

Moss JA, Nocker A, Lepo JE, Snyder RA.

Appl Environ Microbiol. 2006 Sep;72(9):5679-88.

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41.

A mRNA-based thermosensor controls expression of rhizobial heat shock genes.

Nocker A, Hausherr T, Balsiger S, Krstulovic NP, Hennecke H, Narberhaus F.

Nucleic Acids Res. 2001 Dec 1;29(23):4800-7.

42.

ROSE elements occur in disparate rhizobia and are functionally interchangeable between species.

Nocker A, Krstulovic NP, Perret X, Narberhaus F.

Arch Microbiol. 2001 Jul;176(1-2):44-51.

PMID:
11479702
43.

Multiple small heat shock proteins in rhizobia.

Münchbach M, Nocker A, Narberhaus F.

J Bacteriol. 1999 Jan;181(1):83-90.

44.

A novel DNA element that controls bacterial heat shock gene expression.

Narberhaus F, Käser R, Nocker A, Hennecke H.

Mol Microbiol. 1998 Apr;28(2):315-23.

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