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Items: 1 to 50 of 56

1.

Clustering of Vibrio parahaemolyticus Isolates Using MLST and Whole-Genome Phylogenetics and Protein Motif Fingerprinting.

Jesser KJ, Valdivia-Granda W, Jones JL, Noble RT.

Front Public Health. 2019 May 8;7:66. doi: 10.3389/fpubh.2019.00066. eCollection 2019.

2.

Vibrio Ecology in the Neuse River Estuary, North Carolina, Characterized by Next-Generation Amplicon Sequencing of the Gene Encoding Heat Shock Protein 60 (hsp60).

Jesser KJ, Noble RT.

Appl Environ Microbiol. 2018 Jun 18;84(13). pii: e00333-18. doi: 10.1128/AEM.00333-18. Print 2018 Jul 1.

3.

Quantification of pathogens and markers of fecal contamination during storm events along popular surfing beaches in San Diego, California.

Steele JA, Blackwood AD, Griffith JF, Noble RT, Schiff KC.

Water Res. 2018 Jun 1;136:137-149. doi: 10.1016/j.watres.2018.01.056.

PMID:
29501758
4.

Different abundance and correlational patterns exist between total and presumed pathogenic Vibrio vulnificus and V. parahaemolyticus in shellfish and waters along the North Carolina coast.

Williams TC, Froelich BA, Phippen B, Fowler P, Noble RT, Oliver JD.

FEMS Microbiol Ecol. 2017 Jun 1;93(6). doi: 10.1093/femsec/fix071.

PMID:
28531284
5.

Differences in Abundances of Total Vibrio spp., V. vulnificus, and V. parahaemolyticus in Clams and Oysters in North Carolina.

Froelich BA, Phippen B, Fowler P, Noble RT, Oliver JD.

Appl Environ Microbiol. 2016 Dec 30;83(2). pii: e02265-16. doi: 10.1128/AEM.02265-16. Print 2017 Jan 15.

6.

Virus-mediated archaeal hecatomb in the deep seafloor.

Danovaro R, Dell'Anno A, Corinaldesi C, Rastelli E, Cavicchioli R, Krupovic M, Noble RT, Nunoura T, Prangishvili D.

Sci Adv. 2016 Oct 12;2(10):e1600492. eCollection 2016 Oct.

7.

Vibrio parahaemolyticus and Vibrio vulnificus in South America: water, seafood and human infections.

Raszl SM, Froelich BA, Vieira CR, Blackwood AD, Noble RT.

J Appl Microbiol. 2016 Nov;121(5):1201-1222. doi: 10.1111/jam.13246. Epub 2016 Sep 8. Review.

PMID:
27459915
8.

Quantification of Viral and Prokaryotic Production Rates in Benthic Ecosystems: A Methods Comparison.

Rastelli E, Dell'Anno A, Corinaldesi C, Middelboe M, Noble RT, Danovaro R.

Front Microbiol. 2016 Sep 22;7:1501. eCollection 2016.

9.

Vibrio bacteria in raw oysters: managing risks to human health.

Froelich BA, Noble RT.

Philos Trans R Soc Lond B Biol Sci. 2016 Mar 5;371(1689). pii: 20150209. doi: 10.1098/rstb.2015.0209. Review.

10.

Managing marine disease emergencies in an era of rapid change.

Groner ML, Maynard J, Breyta R, Carnegie RB, Dobson A, Friedman CS, Froelich B, Garren M, Gulland FM, Heron SF, Noble RT, Revie CW, Shields JD, Vanderstichel R, Weil E, Wyllie-Echeverria S, Harvell CD.

Philos Trans R Soc Lond B Biol Sci. 2016 Mar 5;371(1689). pii: 20150364. doi: 10.1098/rstb.2015.0364. Review.

11.

Multi-laboratory survey of qPCR enterococci analysis method performance in U.S. coastal and inland surface waters.

Haugland RA, Siefring S, Varma M, Oshima KH, Sivaganesan M, Cao Y, Raith M, Griffith J, Weisberg SB, Noble RT, Blackwood AD, Kinzelman J, Anan'eva T, Bushon RN, Stelzer EA, Harwood VJ, Gordon KV, Sinigalliano C.

J Microbiol Methods. 2016 Apr;123:114-25. doi: 10.1016/j.mimet.2016.01.017. Epub 2016 Feb 2.

PMID:
26844886
12.

Halobacteriovorax, an underestimated predator on bacteria: potential impact relative to viruses on bacterial mortality.

Williams HN, Lymperopoulou DS, Athar R, Chauhan A, Dickerson TL, Chen H, Laws E, Berhane TK, Flowers AR, Bradley N, Young S, Blackwood D, Murray J, Mustapha O, Blackwell C, Tung Y, Noble RT.

ISME J. 2016 Feb;10(2):491-9. doi: 10.1038/ismej.2015.129. Epub 2015 Aug 7.

13.

Development of a matrix tool for the prediction of Vibrio species in oysters harvested from North Carolina.

Froelich BA, Ayrapetyan M, Fowler P, Oliver JD, Noble RT.

Appl Environ Microbiol. 2015 Feb;81(3):1111-9. doi: 10.1128/AEM.03206-14. Epub 2014 Dec 1.

14.

Factors affecting the uptake and retention of Vibrio vulnificus in oysters.

Froelich BA, Noble RT.

Appl Environ Microbiol. 2014 Dec;80(24):7454-9. doi: 10.1128/AEM.02042-14. Epub 2014 Sep 26. Review.

15.

The effect of storage time on Vibrio spp. and fecal indicator bacteria in an Isco autosampler.

Ghazaleh MN, Froelich BA, Noble RT.

J Microbiol Methods. 2014 Sep;104:109-16. doi: 10.1016/j.mimet.2014.06.021. Epub 2014 Jul 6.

PMID:
25008356
16.

The evaluation of four recent culture-based methods for the isolation and enumeration of Vibrio vulnificus bacteria from oyster meat.

Froelich BA, Weiss MJ, Noble RT.

J Microbiol Methods. 2014 Feb;97:1-5. doi: 10.1016/j.mimet.2013.12.004. Epub 2013 Dec 16.

PMID:
24355773
17.

Comparisons of statistical models to predict fecal indicator bacteria concentrations enumerated by qPCR- and culture-based methods.

Gonzalez RA, Noble RT.

Water Res. 2014 Jan 1;48:296-305. doi: 10.1016/j.watres.2013.09.038. Epub 2013 Oct 2.

PMID:
24139103
18.

Assessment of E. coli partitioning behavior via both culture-based and qPCR methods.

Krometis LA, Noble RT, Characklis GW, Denene Blackwood A, Sobsey MD.

Water Sci Technol. 2013;68(6):1359-69. doi: 10.2166/wst.2013.363.

PMID:
24056435
19.

Recommendations following a multi-laboratory comparison of microbial source tracking methods.

Stewart JR, Boehm AB, Dubinsky EA, Fong TT, Goodwin KD, Griffith JF, Noble RT, Shanks OC, Vijayavel K, Weisberg SB.

Water Res. 2013 Nov 15;47(18):6829-38. doi: 10.1016/j.watres.2013.04.063. Epub 2013 Jul 10.

PMID:
23891204
20.

Performance of viruses and bacteriophages for fecal source determination in a multi-laboratory, comparative study.

Harwood VJ, Boehm AB, Sassoubre LM, Vijayavel K, Stewart JR, Fong TT, Caprais MP, Converse RR, Diston D, Ebdon J, Fuhrman JA, Gourmelon M, Gentry-Shields J, Griffith JF, Kashian DR, Noble RT, Taylor H, Wicki M.

Water Res. 2013 Nov 15;47(18):6929-43. doi: 10.1016/j.watres.2013.04.064. Epub 2013 Jul 4.

PMID:
23886543
21.

Effect of platform, reference material, and quantification model on enumeration of Enterococcus by quantitative PCR methods.

Cao Y, Sivaganesan M, Kinzelman J, Blackwood AD, Noble RT, Haugland RA, Griffith JF, Weisberg SB.

Water Res. 2013 Jan 1;47(1):233-41. doi: 10.1016/j.watres.2012.09.056. Epub 2012 Oct 22.

PMID:
23123048
22.

Application of empirical predictive modeling using conventional and alternative fecal indicator bacteria in eastern North Carolina waters.

Gonzalez RA, Conn KE, Crosswell JR, Noble RT.

Water Res. 2012 Nov 15;46(18):5871-82. doi: 10.1016/j.watres.2012.07.050. Epub 2012 Aug 30.

PMID:
22981488
23.

Apparent loss of Vibrio vulnificus from North Carolina oysters coincides with a drought-induced increase in salinity.

Froelich BA, Williams TC, Noble RT, Oliver JD.

Appl Environ Microbiol. 2012 Jun;78(11):3885-9. doi: 10.1128/AEM.07855-11. Epub 2012 Mar 23.

24.

Using rapid indicators for Enterococcus to assess the risk of illness after exposure to urban runoff contaminated marine water.

Colford JM Jr, Schiff KC, Griffith JF, Yau V, Arnold BF, Wright CC, Gruber JS, Wade TJ, Burns S, Hayes J, McGee C, Gold M, Cao Y, Noble RT, Haugland R, Weisberg SB.

Water Res. 2012 May 1;46(7):2176-86. doi: 10.1016/j.watres.2012.01.033. Epub 2012 Feb 2.

25.

Correlation between quantitative PCR and culture-based methods for measuring Enterococcus spp. over various temporal scales at three California marine beaches.

Converse RR, Griffith JF, Noble RT, Haugland RA, Schiff KC, Weisberg SB.

Appl Environ Microbiol. 2012 Feb;78(4):1237-42. doi: 10.1128/AEM.07136-11. Epub 2011 Dec 16.

26.

Interlaboratory comparison of real-time PCR protocols for quantification of general fecal indicator bacteria.

Shanks OC, Sivaganesan M, Peed L, Kelty CA, Blackwood AD, Greene MR, Noble RT, Bushon RN, Stelzer EA, Kinzelman J, Anan'eva T, Sinigalliano C, Wanless D, Griffith J, Cao Y, Weisberg S, Harwood VJ, Staley C, Oshima KH, Varma M, Haugland RA.

Environ Sci Technol. 2012 Jan 17;46(2):945-53. doi: 10.1021/es2031455. Epub 2011 Dec 16. Erratum in: Environ Sci Technol. 2012 Feb 21;46(4):2478.

PMID:
22133009
27.

Microbial water quality before and after the repair of a failing onsite wastewater treatment system adjacent to coastal waters.

Conn KE, Habteselassie MY, Denene Blackwood A, Noble RT.

J Appl Microbiol. 2012 Jan;112(1):214-24. doi: 10.1111/j.1365-2672.2011.05183.x. Epub 2011 Dec 8.

28.

Contrasts in concentrations and loads of conventional and alternative indicators of fecal contamination in coastal stormwater.

Converse RR, Piehler MF, Noble RT.

Water Res. 2011 Oct 15;45(16):5229-40. doi: 10.1016/j.watres.2011.07.029. Epub 2011 Jul 29.

PMID:
21840561
29.

Tracking microbial transport through four onsite wastewater treatment systems to receiving waters in eastern North Carolina.

Habteselassie MY, Kirs M, Conn KE, Blackwood AD, Kelly G, Noble RT.

J Appl Microbiol. 2011 Oct;111(4):835-47. doi: 10.1111/j.1365-2672.2011.05105.x. Epub 2011 Aug 4.

30.

Marine viruses and global climate change.

Danovaro R, Corinaldesi C, Dell'anno A, Fuhrman JA, Middelburg JJ, Noble RT, Suttle CA.

FEMS Microbiol Rev. 2011 Nov;35(6):993-1034. doi: 10.1111/j.1574-6976.2010.00258.x. Epub 2011 Jan 4. Review.

31.

Comparison of rapid quantitative PCR-based and conventional culture-based methods for enumeration of Enterococcus spp. and Escherichia coli in recreational waters.

Noble RT, Blackwood AD, Griffith JF, McGee CD, Weisberg SB.

Appl Environ Microbiol. 2010 Nov;76(22):7437-43. doi: 10.1128/AEM.00651-10. Epub 2010 Sep 24.

32.

Addressing uncertainty in fecal indicator bacteria dark inactivation rates.

Gronewold AD, Myers L, Swall JL, Noble RT.

Water Res. 2011 Jan;45(2):652-64. doi: 10.1016/j.watres.2010.08.029. Epub 2010 Aug 25.

PMID:
20843534
33.

Loading of fecal indicator bacteria in North Carolina tidal creek headwaters: hydrographic patterns and terrestrial runoff relationships.

Stumpf CH, Piehler MF, Thompson S, Noble RT.

Water Res. 2010 Sep;44(16):4704-15. doi: 10.1016/j.watres.2010.07.004. Epub 2010 Jul 13.

PMID:
20673947
34.

Characterizing fecal contamination in stormwater runoff in coastal North Carolina, USA.

Parker JK, McIntyre D, Noble RT.

Water Res. 2010 Jul;44(14):4186-94.

PMID:
20617564
35.

Rapid QPCR-based assay for fecal Bacteroides spp. as a tool for assessing fecal contamination in recreational waters.

Converse RR, Blackwood AD, Kirs M, Griffith JF, Noble RT.

Water Res. 2009 Nov;43(19):4828-37. doi: 10.1016/j.watres.2009.06.036. Epub 2009 Jun 24.

PMID:
19631958
36.

Space/time analysis of fecal pollution and rainfall in an eastern North Carolina estuary.

Coulliette AD, Money ES, Serre ML, Noble RT.

Environ Sci Technol. 2009 May 15;43(10):3728-35.

37.

Impacts of rainfall on the water quality of the Newport River Estuary (Eastern North Carolina, USA).

Coulliette AD, Noble RT.

J Water Health. 2008 Dec;6(4):473-82. doi: 10.2166/wh.2008.136.

PMID:
18401112
38.

Comparison of transcription-mediated amplification and growth-based methods for the quantitation of Enterococcus bacteria in environmental waters.

Morris CA, Blackwood AD, Kirs M, Buttigieg ND, Morgan RR, Hogan JJ, Weeks I, Noble RT.

Appl Environ Microbiol. 2008 May;74(10):3319-20. doi: 10.1128/AEM.02623-07. Epub 2008 Mar 31.

39.

Dynamics and predictive modelling of Vibrio spp. in the Neuse River Estuary, North Carolina, USA.

Hsieh JL, Fries JS, Noble RT.

Environ Microbiol. 2008 Jan;10(1):57-64. doi: 10.1111/j.1462-2920.2007.01429.x.

PMID:
18211266
40.

Quantitative PCR for detection and enumeration of genetic markers of bovine fecal pollution.

Shanks OC, Atikovic E, Blackwood AD, Lu J, Noble RT, Domingo JS, Seifring S, Sivaganesan M, Haugland RA.

Appl Environ Microbiol. 2008 Feb;74(3):745-52. Epub 2007 Dec 7.

41.
42.

Virus and prokaryote enumeration from planktonic aquatic environments by epifluorescence microscopy with SYBR Green I.

Patel A, Noble RT, Steele JA, Schwalbach MS, Hewson I, Fuhrman JA.

Nat Protoc. 2007;2(2):269-76.

PMID:
17406585
44.

Bacteriological water quality along the Tijuana-Ensenada, Baja California, México shoreline.

Orozco-Borbón MV, Rico-Mora R, Weisberg SB, Noble RT, Dorsey JH, Leecaster MK, McGee CD.

Mar Pollut Bull. 2006 Oct;52(10):1190-6. Epub 2006 May 5.

PMID:
16678215
45.

Multitiered approach using quantitative PCR to track sources of fecal pollution affecting Santa Monica Bay, California.

Noble RT, Griffith JF, Blackwood AD, Fuhrman JA, Gregory JB, Hernandez X, Liang X, Bera AA, Schiff K.

Appl Environ Microbiol. 2006 Feb;72(2):1604-12.

46.

A review of technologies for rapid detection of bacteria in recreational waters.

Noble RT, Weisberg SB.

J Water Health. 2005 Dec;3(4):381-92. Review.

PMID:
16459844
47.
48.

Storm effects on regional beach water quality along the southern California shoreline.

Noble RT, Weisberg SB, Leecaster MK, McGee CD, Dorsey JH, Vainik P, Orozco-Borbón V.

J Water Health. 2003 Mar;1(1):23-31.

PMID:
15384270
49.

Use of viral pathogens and indicators to differentiate between human and non-human fecal contamination in a microbial source tracking comparison study.

Noble RT, Allen SM, Blackwood AD, Chu W, Jiang SC, Lovelace GL, Sobsey MD, Stewart JR, Wait DA.

J Water Health. 2003 Dec;1(4):195-207.

PMID:
15382724
50.

Comparison of bacterial indicator analysis methods in stormwater-affected coastal waters.

Noble RT, Leecaster MK, McGee CD, Weisberg SB, Ritter K.

Water Res. 2004 Mar;38(5):1183-8.

PMID:
14975651

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