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Items: 23

1.

BCOR-coupled H2A monoubiquitination represses a subset of androgen receptor target genes regulating prostate cancer proliferation.

Lempiäinen JK, Manjur ABMK, Malinen M, Ketola K, Niskanen EA, Palvimo JJ.

Oncogene. 2020 Jan 10. doi: 10.1038/s41388-020-1153-3. [Epub ahead of print]

PMID:
31925334
2.

IRF2BP2 modulates the crosstalk between glucocorticoid and TNF signaling.

Manjur ABMK, Lempiäinen JK, Malinen M, Palvimo JJ, Niskanen EA.

J Steroid Biochem Mol Biol. 2019 Sep;192:105382. doi: 10.1016/j.jsbmb.2019.105382. Epub 2019 May 28.

PMID:
31145973
3.

Lack of androgen receptor SUMOylation results in male infertility due to epididymal dysfunction.

Zhang FP, Malinen M, Mehmood A, Lehtiniemi T, Jääskeläinen T, Niskanen EA, Korhonen H, Laiho A, Elo LL, Ohlsson C, Kotaja N, Poutanen M, Sipilä P, Palvimo JJ.

Nat Commun. 2019 Feb 15;10(1):777. doi: 10.1038/s41467-019-08730-z.

4.

Agonist-specific Protein Interactomes of Glucocorticoid and Androgen Receptor as Revealed by Proximity Mapping.

Lempiäinen JK, Niskanen EA, Vuoti KM, Lampinen RE, Göös H, Varjosalo M, Palvimo JJ.

Mol Cell Proteomics. 2017 Aug;16(8):1462-1474. doi: 10.1074/mcp.M117.067488. Epub 2017 Jun 13.

5.

Chromatin SUMOylation in heat stress: To protect, pause and organise?: SUMO stress response on chromatin.

Niskanen EA, Palvimo JJ.

Bioessays. 2017 Jun;39(6). doi: 10.1002/bies.201600263. Epub 2017 Apr 25. Review.

PMID:
28440894
6.

Crosstalk between androgen and pro-inflammatory signaling remodels androgen receptor and NF-κB cistrome to reprogram the prostate cancer cell transcriptome.

Malinen M, Niskanen EA, Kaikkonen MU, Palvimo JJ.

Nucleic Acids Res. 2017 Jan 25;45(2):619-630. doi: 10.1093/nar/gkw855. Epub 2016 Sep 26.

7.

Global analysis of transcription in castration-resistant prostate cancer cells uncovers active enhancers and direct androgen receptor targets.

Toropainen S, Niskanen EA, Malinen M, Sutinen P, Kaikkonen MU, Palvimo JJ.

Sci Rep. 2016 Sep 19;6:33510. doi: 10.1038/srep33510.

8.

Promoter-Targeted Histone Acetylation of Chromatinized Parvoviral Genome Is Essential for the Progress of Infection.

Mäntylä E, Salokas K, Oittinen M, Aho V, Mäntysaari P, Palmujoki L, Kalliolinna O, Ihalainen TO, Niskanen EA, Timonen J, Viiri K, Vihinen-Ranta M.

J Virol. 2016 Mar 28;90(8):4059-4066. doi: 10.1128/JVI.03160-15. Print 2016 Apr.

9.

Reorganization of Nuclear Pore Complexes and the Lamina in Late-Stage Parvovirus Infection.

Mäntylä E, Niskanen EA, Ihalainen TO, Vihinen-Ranta M.

J Virol. 2015 Nov;89(22):11706-10. doi: 10.1128/JVI.01608-15. Epub 2015 Aug 26.

10.

Global SUMOylation on active chromatin is an acute heat stress response restricting transcription.

Niskanen EA, Malinen M, Sutinen P, Toropainen S, Paakinaho V, Vihervaara A, Joutsen J, Kaikkonen MU, Sistonen L, Palvimo JJ.

Genome Biol. 2015 Jul 28;16:153. doi: 10.1186/s13059-015-0717-y.

11.

Mutations in DNA binding and transactivation domains affect the dynamics of parvovirus NS1 protein.

Niskanen EA, Kalliolinna O, Ihalainen TO, Häkkinen M, Vihinen-Ranta M.

J Virol. 2013 Nov;87(21):11762-74. doi: 10.1128/JVI.01678-13. Epub 2013 Aug 28.

12.

Distribution and dynamics of transcription-associated proteins during parvovirus infection.

Ihalainen TO, Willman SF, Niskanen EA, Paloheimo O, Smolander H, Laurila JP, Kaikkonen MU, Vihinen-Ranta M.

J Virol. 2012 Dec;86(24):13779-84. doi: 10.1128/JVI.01625-12. Epub 2012 Oct 3.

13.

Coxsackievirus B3-induced cellular protrusions: structural characteristics and functional competence.

Paloheimo O, Ihalainen TO, Tauriainen S, Välilehto O, Kirjavainen S, Niskanen EA, Laakkonen JP, Hyöty H, Vihinen-Ranta M.

J Virol. 2011 Jul;85(13):6714-24. doi: 10.1128/JVI.00247-10. Epub 2011 Apr 27.

14.

Effect of ATP binding and hydrolysis on dynamics of canine parvovirus NS1.

Niskanen EA, Ihalainen TO, Kalliolinna O, Häkkinen MM, Vihinen-Ranta M.

J Virol. 2010 May;84(10):5391-403. doi: 10.1128/JVI.02221-09. Epub 2010 Mar 10.

15.

Parvovirus induced alterations in nuclear architecture and dynamics.

Ihalainen TO, Niskanen EA, Jylhävä J, Paloheimo O, Dross N, Smolander H, Langowski J, Timonen J, Vihinen-Ranta M.

PLoS One. 2009 Jun 17;4(6):e5948. doi: 10.1371/journal.pone.0005948.

16.

Generation of lentivirus vectors using recombinant baculoviruses.

Lesch HP, Turpeinen S, Niskanen EA, Mähönen AJ, Airenne KJ, Ylä-Herttuala S.

Gene Ther. 2008 Sep;15(18):1280-6. doi: 10.1038/gt.2008.76. Epub 2008 May 8.

PMID:
18463689
17.

Baculovirus-mediated immediate-early gene expression and nuclear reorganization in human cells.

Laakkonen JP, Kaikkonen MU, Ronkainen PH, Ihalainen TO, Niskanen EA, Häkkinen M, Salminen M, Kulomaa MS, Ylä-Herttuala S, Airenne KJ, Vihinen-Ranta M.

Cell Microbiol. 2008 Mar;10(3):667-81. Epub 2007 Nov 27.

PMID:
18042259
18.

Dynamics and interactions of parvoviral NS1 protein in the nucleus.

Ihalainen TO, Niskanen EA, Jylhävä J, Turpeinen T, Rinne J, Timonen J, Vihinen-Ranta M.

Cell Microbiol. 2007 Aug;9(8):1946-59. Epub 2007 Apr 5.

PMID:
17419720
19.

Structure and characterization of a novel chicken biotin-binding protein A (BBP-A).

Hytönen VP, Määttä JA, Niskanen EA, Huuskonen J, Helttunen KJ, Halling KK, Nordlund HR, Rissanen K, Johnson MS, Salminen TA, Kulomaa MS, Laitinen OH, Airenne TT.

BMC Struct Biol. 2007 Mar 7;7:8.

20.

Controlling quaternary structure assembly: subunit interface engineering and crystal structure of dual chain avidin.

Hytönen VP, Hörhä J, Airenne TT, Niskanen EA, Helttunen KJ, Johnson MS, Salminen TA, Kulomaa MS, Nordlund HR.

J Mol Biol. 2006 Jun 23;359(5):1352-63. Epub 2006 May 6.

PMID:
16787776
21.

Chicken genome analysis reveals novel genes encoding biotin-binding proteins related to avidin family.

Niskanen EA, Hytönen VP, Grapputo A, Nordlund HR, Kulomaa MS, Laitinen OH.

BMC Genomics. 2005 Mar 18;6:41.

22.

Design and construction of highly stable, protease-resistant chimeric avidins.

Hytönen VP, Määttä JA, Nyholm TK, Livnah O, Eisenberg-Domovich Y, Hyre D, Nordlund HR, Hörhä J, Niskanen EA, Paldanius T, Kulomaa T, Porkka EJ, Stayton PS, Laitinen OH, Kulomaa MS.

J Biol Chem. 2005 Mar 18;280(11):10228-33. Epub 2005 Jan 13.

23.

Introduction of histidine residues into avidin subunit interfaces allows pH-dependent regulation of quaternary structure and biotin binding.

Nordlund HR, Hytönen VP, Laitinen OH, Uotila ST, Niskanen EA, Savolainen J, Porkka E, Kulomaa MS.

FEBS Lett. 2003 Dec 18;555(3):449-54.

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