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Items: 1 to 50 of 143

1.

Self-reported Symptoms of Depression Among Chinese Rural-to-Urban Migrants and Left-Behind Family Members.

Nikoloski Z, Zhang A, Hopkin G, Mossialos E.

JAMA Netw Open. 2019 May 3;2(5):e193355. doi: 10.1001/jamanetworkopen.2019.3355.

2.

Live-cell imaging of the cytoskeleton in elongating cotton fibres.

Yu Y, Wu S, Nowak J, Wang G, Han L, Feng Z, Mendrinna A, Ma Y, Wang H, Zhang X, Tian J, Dong L, Nikoloski Z, Persson S, Kong Z.

Nat Plants. 2019 May;5(5):498-504. doi: 10.1038/s41477-019-0418-8. Epub 2019 Apr 30.

PMID:
31040442
3.

Identification and characterization of metabolite quantitative trait loci in tomato leaves and comparison with those reported for fruits and seeds.

Nunes-Nesi A, Alseekh S, de Oliveira Silva FM, Omranian N, Lichtenstein G, Mirnezhad M, González RRR, Sabio Y Garcia J, Conte M, Leiss KA, Klinkhamer PGL, Nikoloski Z, Carrari F, Fernie AR.

Metabolomics. 2019 Mar 15;15(4):46. doi: 10.1007/s11306-019-1503-8.

4.

Kingdom-wide comparison reveals the evolution of diurnal gene expression in Archaeplastida.

Ferrari C, Proost S, Janowski M, Becker J, Nikoloski Z, Bhattacharya D, Price D, Tohge T, Bar-Even A, Fernie A, Stitt M, Mutwil M.

Nat Commun. 2019 Feb 13;10(1):737. doi: 10.1038/s41467-019-08703-2.

5.

Cellular determinants of metabolite concentration ranges.

Küken A, Eloundou-Mbebi JMO, Basler G, Nikoloski Z.

PLoS Comput Biol. 2019 Jan 24;15(1):e1006687. doi: 10.1371/journal.pcbi.1006687. eCollection 2019 Jan.

6.

The impact of the Greek economic adjustment programme on household health expenditure.

Kyriopoulos I, Nikoloski Z, Mossialos E.

Soc Sci Med. 2019 Feb;222:274-284. doi: 10.1016/j.socscimed.2019.01.021. Epub 2019 Jan 14.

7.

Computational Approaches to Design and Test Plant Synthetic Metabolic Pathways.

Küken A, Nikoloski Z.

Plant Physiol. 2019 Mar;179(3):894-906. doi: 10.1104/pp.18.01273. Epub 2019 Jan 15. Review.

8.

Genetic basis of plasticity in plants.

Laitinen RAE, Nikoloski Z.

J Exp Bot. 2019 Feb 5;70(3):739-745. doi: 10.1093/jxb/ery404.

PMID:
30445526
9.

Advances in metabolic flux analysis toward genome-scale profiling of higher organisms.

Basler G, Fernie AR, Nikoloski Z.

Biosci Rep. 2018 Nov 23;38(6). pii: BSR20170224. doi: 10.1042/BSR20170224. Print 2018 Dec 21. Review.

10.

Effects of microcompartmentation on flux distribution and metabolic pools in Chlamydomonas reinhardtii chloroplasts.

Küken A, Sommer F, Yaneva-Roder L, Mackinder LC, Höhne M, Geimer S, Jonikas MC, Schroda M, Stitt M, Nikoloski Z, Mettler-Altmann T.

Elife. 2018 Oct 11;7. pii: e37960. doi: 10.7554/eLife.37960.

11.

Genetic diversity of strawberry germplasm using metabolomic biomarkers.

Vallarino JG, de Abreu E Lima F, Soria C, Tong H, Pott DM, Willmitzer L, Fernie AR, Nikoloski Z, Osorio S.

Sci Rep. 2018 Sep 26;8(1):14386. doi: 10.1038/s41598-018-32212-9.

12.

AtRsgA from Arabidopsis thaliana is important for maturation of the small subunit of the chloroplast ribosome.

Janowski M, Zoschke R, Scharff LB, Martinez Jaime S, Ferrari C, Proost S, Ng Wei Xiong J, Omranian N, Musialak-Lange M, Nikoloski Z, Graf A, Schöttler MA, Sampathkumar A, Vaid N, Mutwil M.

Plant J. 2018 Oct;96(2):404-420. doi: 10.1111/tpj.14040. Epub 2018 Sep 8.

PMID:
30044525
13.

Membership In Seguro Popular In Mexico Linked To A Small Reduction In Catastrophic Health Expenditure.

Nikoloski Z, Mossialos E.

Health Aff (Millwood). 2018 Jul;37(7):1169-1177. doi: 10.1377/hlthaff.2017.1510.

PMID:
29985693
14.

Integration of large-scale data for extraction of integrated Arabidopsis root cell-type specific models.

Scheunemann M, Brady SM, Nikoloski Z.

Sci Rep. 2018 May 21;8(1):7919. doi: 10.1038/s41598-018-26232-8.

15.

Regression-Based Modeling of Complex Plant Traits Based on Metabolomics Data.

de Abreu E Lima F, Leifels L, Nikoloski Z.

Methods Mol Biol. 2018;1778:321-327. doi: 10.1007/978-1-4939-7819-9_23.

PMID:
29761449
16.

Data Reduction Approaches for Dissecting Transcriptional Effects on Metabolism.

Schwahn K, Nikoloski Z.

Front Plant Sci. 2018 Apr 20;9:538. doi: 10.3389/fpls.2018.00538. eCollection 2018.

17.

Classification-driven framework to predict maize hybrid field performance from metabolic profiles of young parental roots.

de Abreu E Lima F, Willmitzer L, Nikoloski Z.

PLoS One. 2018 Apr 26;13(4):e0196038. doi: 10.1371/journal.pone.0196038. eCollection 2018.

18.

Equity of access to maternal health interventions in Brazil and Colombia: a retrospective study.

De La Torre A, Nikoloski Z, Mossialos E.

Int J Equity Health. 2018 Apr 11;17(1):43. doi: 10.1186/s12939-018-0752-x.

19.

Unraveling lipid metabolism in maize with time-resolved multi-omics data.

de Abreu E Lima F, Li K, Wen W, Yan J, Nikoloski Z, Willmitzer L, Brotman Y.

Plant J. 2018 Mar;93(6):1102-1115. doi: 10.1111/tpj.13833. Epub 2018 Feb 23.

20.

Stoichiometric Correlation Analysis: Principles of Metabolic Functionality from Metabolomics Data.

Schwahn K, Beleggia R, Omranian N, Nikoloski Z.

Front Plant Sci. 2017 Dec 18;8:2152. doi: 10.3389/fpls.2017.02152. eCollection 2017.

21.

Inheritance patterns in metabolism and growth in diallel crosses of Arabidopsis thaliana from a single growth habitat.

Rodriguez Cubillos AE, Tong H, Alseekh S, de Abreu E Lima F, Yu J, Fernie AR, Nikoloski Z, Laitinen RAE.

Heredity (Edinb). 2018 May;120(5):463-473. doi: 10.1038/s41437-017-0030-5. Epub 2017 Dec 13.

22.

Ensemble gene function prediction database reveals genes important for complex I formation in Arabidopsis thaliana.

Hansen BO, Meyer EH, Ferrari C, Vaid N, Movahedi S, Vandepoele K, Nikoloski Z, Mutwil M.

New Phytol. 2018 Mar;217(4):1521-1534. doi: 10.1111/nph.14921. Epub 2017 Dec 4.

23.

Integrative field scale phenotyping for investigating metabolic components of water stress within a vineyard.

Gago J, Fernie AR, Nikoloski Z, Tohge T, Martorell S, Escalona JM, Ribas-Carbó M, Flexas J, Medrano H.

Plant Methods. 2017 Oct 30;13:90. doi: 10.1186/s13007-017-0241-z. eCollection 2017.

24.

Canalization of Tomato Fruit Metabolism.

Alseekh S, Tong H, Scossa F, Brotman Y, Vigroux F, Tohge T, Ofner I, Zamir D, Nikoloski Z, Fernie AR.

Plant Cell. 2017 Nov;29(11):2753-2765. doi: 10.1105/tpc.17.00367. Epub 2017 Nov 1.

25.

Mapping the Arabidopsis Metabolic Landscape by Untargeted Metabolomics at Different Environmental Conditions.

Wu S, Tohge T, Cuadros-Inostroza Á, Tong H, Tenenboim H, Kooke R, Méret M, Keurentjes JB, Nikoloski Z, Fernie AR, Willmitzer L, Brotman Y.

Mol Plant. 2018 Jan 8;11(1):118-134. doi: 10.1016/j.molp.2017.08.012. Epub 2017 Sep 1.

26.

Does health insurance reduce out-of-pocket expenditure? Heterogeneity among China's middle-aged and elderly.

Zhang A, Nikoloski Z, Mossialos E.

Soc Sci Med. 2017 Oct;190:11-19. doi: 10.1016/j.socscimed.2017.08.005. Epub 2017 Aug 11.

PMID:
28823943
27.

Genome-Scale Modeling of Photorespiratory Pathway Manipulation.

Küken A, Nikoloski Z.

Methods Mol Biol. 2017;1653:195-202. doi: 10.1007/978-1-4939-7225-8_13.

PMID:
28822134
28.

Resolving the central metabolism of Arabidopsis guard cells.

Robaina-Estévez S, Daloso DM, Zhang Y, Fernie AR, Nikoloski Z.

Sci Rep. 2017 Aug 16;7(1):8307. doi: 10.1038/s41598-017-07132-9.

29.

Revisiting ancestral polyploidy in plants.

Ruprecht C, Lohaus R, Vanneste K, Mutwil M, Nikoloski Z, Van de Peer Y, Persson S.

Sci Adv. 2017 Jul 5;3(7):e1603195. doi: 10.1126/sciadv.1603195. eCollection 2017 Jul.

30.

Getting back to nature: a reality check for experiments in controlled environments.

Annunziata MG, Apelt F, Carillo P, Krause U, Feil R, Mengin V, Lauxmann MA, Köhl K, Nikoloski Z, Stitt M, Lunn JE, Raines C.

J Exp Bot. 2017 Jul 20;68(16):4463-4477. doi: 10.1093/jxb/erx220.

31.

System-wide organization of actin cytoskeleton determines organelle transport in hypocotyl plant cells.

Breuer D, Nowak J, Ivakov A, Somssich M, Persson S, Nikoloski Z.

Proc Natl Acad Sci U S A. 2017 Jul 11;114(28):E5741-E5749. doi: 10.1073/pnas.1706711114. Epub 2017 Jun 27. Erratum in: Proc Natl Acad Sci U S A. 2017 Jul 31;:.

32.

Omics-based hybrid prediction in maize.

Westhues M, Schrag TA, Heuer C, Thaller G, Utz HF, Schipprack W, Thiemann A, Seifert F, Ehret A, Schlereth A, Stitt M, Nikoloski Z, Willmitzer L, Schön CC, Scholten S, Melchinger AE.

Theor Appl Genet. 2017 Sep;130(9):1927-1939. doi: 10.1007/s00122-017-2934-0. Epub 2017 Jun 24.

PMID:
28647896
33.

Computational Approaches to Study Gene Regulatory Networks.

Omranian N, Nikoloski Z.

Methods Mol Biol. 2017;1629:283-295. doi: 10.1007/978-1-4939-7125-1_18.

PMID:
28623592
34.

Circadian, Carbon, and Light Control of Expansion Growth and Leaf Movement.

Apelt F, Breuer D, Olas JJ, Annunziata MG, Flis A, Nikoloski Z, Kragler F, Stitt M.

Plant Physiol. 2017 Jul;174(3):1949-1968. doi: 10.1104/pp.17.00503. Epub 2017 May 30.

35.

On the effects of alternative optima in context-specific metabolic model predictions.

Robaina-Estévez S, Nikoloski Z.

PLoS Comput Biol. 2017 May 30;13(5):e1005568. doi: 10.1371/journal.pcbi.1005568. eCollection 2017 May.

36.

Protein-protein interactions and metabolite channelling in the plant tricarboxylic acid cycle.

Zhang Y, Beard KFM, Swart C, Bergmann S, Krahnert I, Nikoloski Z, Graf A, Ratcliffe RG, Sweetlove LJ, Fernie AR, Obata T.

Nat Commun. 2017 May 16;8:15212. doi: 10.1038/ncomms15212.

37.

Metabolic robustness in young roots underpins a predictive model of maize hybrid performance in the field.

de Abreu E Lima F, Westhues M, Cuadros-Inostroza Á, Willmitzer L, Melchinger AE, Nikoloski Z.

Plant J. 2017 Apr;90(2):319-329. doi: 10.1111/tpj.13495. Epub 2017 Mar 14.

38.

A network property necessary for concentration robustness.

Eloundou-Mbebi JM, Küken A, Omranian N, Kleessen S, Neigenfind J, Basler G, Nikoloski Z.

Nat Commun. 2016 Oct 19;7:13255. doi: 10.1038/ncomms13255.

39.

Novel allelic variants in ACD6 cause hybrid necrosis in local collection of Arabidopsis thaliana.

Świadek M, Proost S, Sieh D, Yu J, Todesco M, Jorzig C, Rodriguez Cubillos AE, Plötner B, Nikoloski Z, Chae E, Giavalisco P, Fischer A, Schröder F, Kim ST, Weigel D, Laitinen RA.

New Phytol. 2017 Jan;213(2):900-915. doi: 10.1111/nph.14155. Epub 2016 Sep 2.

40.

iReMet-flux: constraint-based approach for integrating relative metabolite levels into a stoichiometric metabolic models.

Sajitz-Hermstein M, Töpfer N, Kleessen S, Fernie AR, Nikoloski Z.

Bioinformatics. 2016 Sep 1;32(17):i755-i762. doi: 10.1093/bioinformatics/btw465.

PMID:
27587698
41.

Observability of Plant Metabolic Networks Is Reflected in the Correlation of Metabolic Profiles.

Schwahn K, Küken A, Kliebenstein DJ, Fernie AR, Nikoloski Z.

Plant Physiol. 2016 Oct;172(2):1324-1333. Epub 2016 Aug 26.

42.

A Transcriptional and Metabolic Framework for Secondary Wall Formation in Arabidopsis.

Li Z, Omranian N, Neumetzler L, Wang T, Herter T, Usadel B, Demura T, Giavalisco P, Nikoloski Z, Persson S.

Plant Physiol. 2016 Oct;172(2):1334-1351. Epub 2016 Aug 26.

43.

Functional centrality as a predictor of shifts in metabolic flux states.

Sajitz-Hermstein M, Nikoloski Z.

BMC Res Notes. 2016 Jun 21;9:317. doi: 10.1186/s13104-016-2117-0.

44.

Unravelling the in vivo regulation and metabolic role of the alternative oxidase pathway in C3 species under photoinhibitory conditions.

Florez-Sarasa I, Ribas-Carbo M, Del-Saz NF, Schwahn K, Nikoloski Z, Fernie AR, Flexas J.

New Phytol. 2016 Oct;212(1):66-79. doi: 10.1111/nph.14030. Epub 2016 Jun 20.

45.

Multi-objective shadow prices point at principles of metabolic regulation.

Sajitz-Hermstein M, Nikoloski Z.

Biosystems. 2016 Aug;146:91-101. doi: 10.1016/j.biosystems.2016.04.005. Epub 2016 Jun 14.

46.

Editorial: Engineering Synthetic Metabolons: From Metabolic Modeling to Rational Design of Biosynthetic Devices.

Voll LM, Nikoloski Z.

Front Bioeng Biotechnol. 2016 May 6;4:39. doi: 10.3389/fbioe.2016.00039. eCollection 2016. No abstract available.

47.

Control of fluxes in metabolic networks.

Basler G, Nikoloski Z, Larhlimi A, Barabási AL, Liu YY.

Genome Res. 2016 Jul;26(7):956-68. doi: 10.1101/gr.202648.115. Epub 2016 May 19.

48.

Evolutionary Metabolomics Reveals Domestication-Associated Changes in Tetraploid Wheat Kernels.

Beleggia R, Rau D, Laidò G, Platani C, Nigro F, Fragasso M, De Vita P, Scossa F, Fernie AR, Nikoloski Z, Papa R.

Mol Biol Evol. 2016 Jul;33(7):1740-53. doi: 10.1093/molbev/msw050. Epub 2016 Apr 5.

49.

Photorespiratory Bypasses Lead to Increased Growth in Arabidopsis thaliana: Are Predictions Consistent with Experimental Evidence?

Basler G, Küken A, Fernie AR, Nikoloski Z.

Front Bioeng Biotechnol. 2016 Apr 7;4:31. doi: 10.3389/fbioe.2016.00031. eCollection 2016.

50.

Relationships of Leaf Net Photosynthesis, Stomatal Conductance, and Mesophyll Conductance to Primary Metabolism: A Multispecies Meta-Analysis Approach.

Gago J, Daloso Dde M, Figueroa CM, Flexas J, Fernie AR, Nikoloski Z.

Plant Physiol. 2016 May;171(1):265-79. doi: 10.1104/pp.15.01660. Epub 2016 Mar 14. Review.

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