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Items: 34

1.

Comparative Analysis of Eleven Healthcare-Associated Outbreaks of Middle East Respiratory Syndrome Coronavirus (Mers-Cov) from 2015 to 2017.

Bernard-Stoecklin S, Nikolay B, Assiri A, Bin Saeed AA, Ben Embarek PK, El Bushra H, Ki M, Malik MR, Fontanet A, Cauchemez S, Van Kerkhove MD.

Sci Rep. 2019 May 14;9(1):7385. doi: 10.1038/s41598-019-43586-9.

2.

Transmission of Nipah Virus - 14 Years of Investigations in Bangladesh.

Nikolay B, Salje H, Hossain MJ, Khan AKMD, Sazzad HMS, Rahman M, Daszak P, Ströher U, Pulliam JRC, Kilpatrick AM, Nichol ST, Klena JD, Sultana S, Afroj S, Luby SP, Cauchemez S, Gurley ES.

N Engl J Med. 2019 May 9;380(19):1804-1814. doi: 10.1056/NEJMoa1805376.

PMID:
31067370
3.

Epidemiological characteristics of an urban plague epidemic in Madagascar, August-November, 2017: an outbreak report.

Randremanana R, Andrianaivoarimanana V, Nikolay B, Ramasindrazana B, Paireau J, Ten Bosch QA, Rakotondramanga JM, Rahajandraibe S, Rahelinirina S, Rakotomanana F, Rakotoarimanana FM, Randriamampionona LB, Razafimbia V, De Dieu Randria MJ, Raberahona M, Mikaty G, Le Guern AS, Rakotonjanabelo LA, Ndiaye CF, Rasolofo V, Bertherat E, Ratsitorahina M, Cauchemez S, Baril L, Spiegel A, Rajerison M.

Lancet Infect Dis. 2019 May;19(5):537-545. doi: 10.1016/S1473-3099(18)30730-8. Epub 2019 Mar 28.

4.

How Modelling Can Enhance the Analysis of Imperfect Epidemic Data.

Cauchemez S, Hoze N, Cousien A, Nikolay B, Ten Bosch Q.

Trends Parasitol. 2019 May;35(5):369-379. doi: 10.1016/j.pt.2019.01.009. Epub 2019 Feb 6. Review.

PMID:
30738632
5.

Genomic and epidemiological monitoring of yellow fever virus transmission potential.

Faria NR, Kraemer MUG, Hill SC, Goes de Jesus J, Aguiar RS, Iani FCM, Xavier J, Quick J, du Plessis L, Dellicour S, Thézé J, Carvalho RDO, Baele G, Wu CH, Silveira PP, Arruda MB, Pereira MA, Pereira GC, Lourenço J, Obolski U, Abade L, Vasylyeva TI, Giovanetti M, Yi D, Weiss DJ, Wint GRW, Shearer FM, Funk S, Nikolay B, Fonseca V, Adelino TER, Oliveira MAA, Silva MVF, Sacchetto L, Figueiredo PO, Rezende IM, Mello EM, Said RFC, Santos DA, Ferraz ML, Brito MG, Santana LF, Menezes MT, Brindeiro RM, Tanuri A, Dos Santos FCP, Cunha MS, Nogueira JS, Rocco IM, da Costa AC, Komninakis SCV, Azevedo V, Chieppe AO, Araujo ESM, Mendonça MCL, Dos Santos CC, Dos Santos CD, Mares-Guia AM, Nogueira RMR, Sequeira PC, Abreu RG, Garcia MHO, Abreu AL, Okumoto O, Kroon EG, de Albuquerque CFC, Lewandowski K, Pullan ST, Carroll M, de Oliveira T, Sabino EC, Souza RP, Suchard MA, Lemey P, Trindade GS, Drumond BP, Filippis AMB, Loman NJ, Cauchemez S, Alcantara LCJ, Pybus OG.

Science. 2018 Aug 31;361(6405):894-899. doi: 10.1126/science.aat7115. Epub 2018 Aug 23.

PMID:
30139911
6.

Enterovirus outbreak dynamics.

Nikolay B, Cauchemez S.

Science. 2018 Aug 24;361(6404):755-756. doi: 10.1126/science.aau6932. No abstract available.

PMID:
30139861
7.

Dengue serosurvey after a 2-month long outbreak in Nîmes, France, 2015: was there more than met the eye?

Succo T, Noël H, Nikolay B, Maquart M, Cochet A, Leparc-Goffart I, Catelinois O, Salje H, Pelat C, de Crouy-Chanel P, de Valk H, Cauchemez S, Rousseau C.

Euro Surveill. 2018 Jun;23(23). doi: 10.2807/1560-7917.ES.2018.23.23.1700482.

8.

Role of Environmental Factors in Shaping Spatial Distribution of Salmonella enterica Serovar Typhi, Fiji.

de Alwis R, Watson C, Nikolay B, Lowry JH, Thieu NTV, Van TT, Ngoc DTT, Rawalai K, Taufa M, Coriakula J, Lau CL, Nilles EJ, Edmunds WJ, Kama M, Baker S, Cano J.

Emerg Infect Dis. 2018 Feb;24(2):284-293. doi: 10.3201/eid2402.170704.

9.

Socioeconomic and environmental determinants of dengue transmission in an urban setting: An ecological study in Nouméa, New Caledonia.

Zellweger RM, Cano J, Mangeas M, Taglioni F, Mercier A, Despinoy M, Menkès CE, Dupont-Rouzeyrol M, Nikolay B, Teurlai M.

PLoS Negl Trop Dis. 2017 Apr 3;11(4):e0005471. doi: 10.1371/journal.pntd.0005471. eCollection 2017 Apr.

10.

Impact of single annual treatment and four-monthly treatment for hookworm and Ascaris lumbricoides, and factors associated with residual infection among Kenyan school children.

Kepha S, Mwandawiro CS, Anderson RM, Pullan RL, Nuwaha F, Cano J, Njenga SM, Odiere MR, Allen E, Brooker SJ, Nikolay B.

Infect Dis Poverty. 2017 Feb 9;6(1):30. doi: 10.1186/s40249-017-0244-z.

11.

Evaluating Hospital-Based Surveillance for Outbreak Detection in Bangladesh: Analysis of Healthcare Utilization Data.

Nikolay B, Salje H, Sturm-Ramirez K, Azziz-Baumgartner E, Homaira N, Ahmed M, Iuliano AD, Paul RC, Rahman M, Hossain MJ, Luby SP, Cauchemez S, Gurley ES.

PLoS Med. 2017 Jan 17;14(1):e1002218. doi: 10.1371/journal.pmed.1002218. eCollection 2017 Jan.

12.

Spread of yellow fever virus outbreak in Angola and the Democratic Republic of the Congo 2015-16: a modelling study.

Kraemer MUG, Faria NR, Reiner RC Jr, Golding N, Nikolay B, Stasse S, Johansson MA, Salje H, Faye O, Wint GRW, Niedrig M, Shearer FM, Hill SC, Thompson RN, Bisanzio D, Taveira N, Nax HH, Pradelski BSR, Nsoesie EO, Murphy NR, Bogoch II, Khan K, Brownstein JS, Tatem AJ, de Oliveira T, Smith DL, Sall AA, Pybus OG, Hay SI, Cauchemez S.

Lancet Infect Dis. 2017 Mar;17(3):330-338. doi: 10.1016/S1473-3099(16)30513-8. Epub 2016 Dec 23. Erratum in: Lancet Infect Dis. 2019 Apr;19(4):e109.

13.

Monitoring the impact of a national school based deworming programme on soil-transmitted helminths in Kenya: the first three years, 2012 - 2014.

Okoyo C, Nikolay B, Kihara J, Simiyu E, Garn JV, Freeman MC, Mwanje MT, Mukoko DA, Brooker SJ, Pullan RL, Njenga SM, Mwandawiro CS.

Parasit Vectors. 2016 Jul 25;9(1):408. doi: 10.1186/s13071-016-1679-y.

14.

Plasmodium falciparum parasitaemia and clinical malaria among school children living in a high transmission setting in western Kenya.

Kepha S, Nikolay B, Nuwaha F, Mwandawiro CS, Nankabirwa J, Ndibazza J, Cano J, Matoke-Muhia D, Pullan RL, Allen E, Halliday KE, Brooker SJ.

Malar J. 2016 Mar 11;15:157. doi: 10.1186/s12936-016-1176-y.

15.

Ascaris lumbricoides Infection Following School-Based Deworming in Western Kenya: Assessing the Role of Pupils' School and Home Water, Sanitation, and Hygiene Exposures.

Garn JV, Mwandawiro CS, Nikolay B, Drews-Botsch CD, Kihara JH, Brooker SJ, Simiyu EW, Okoyo C, Freeman MC.

Am J Trop Med Hyg. 2016 May 4;94(5):1045-1054. doi: 10.4269/ajtmh.15-0362. Epub 2016 Feb 22.

16.

Modelling the distribution and transmission intensity of lymphatic filariasis in sub-Saharan Africa prior to scaling up interventions: integrated use of geostatistical and mathematical modelling.

Moraga P, Cano J, Baggaley RF, Gyapong JO, Njenga SM, Nikolay B, Davies E, Rebollo MP, Pullan RL, Bockarie MJ, Hollingsworth TD, Gambhir M, Brooker SJ.

Parasit Vectors. 2015 Oct 24;8:560. doi: 10.1186/s13071-015-1166-x.

17.

Interrupting transmission of soil-transmitted helminths: a study protocol for cluster randomised trials evaluating alternative treatment strategies and delivery systems in Kenya.

Brooker SJ, Mwandawiro CS, Halliday KE, Njenga SM, Mcharo C, Gichuki PM, Wasunna B, Kihara JH, Njomo D, Alusala D, Chiguzo A, Turner HC, Teti C, Gwayi-Chore C, Nikolay B, Truscott JE, Hollingsworth TD, Balabanova D, Griffiths UK, Freeman MC, Allen E, Pullan RL, Anderson RM.

BMJ Open. 2015 Oct 19;5(10):e008950. doi: 10.1136/bmjopen-2015-008950.

18.

Understanding Heterogeneity in the Impact of National Neglected Tropical Disease Control Programmes: Evidence from School-Based Deworming in Kenya.

Nikolay B, Mwandawiro CS, Kihara JH, Okoyo C, Cano J, Mwanje MT, Sultani H, Alusala D, Turner HC, Teti C, Garn J, Freeman MC, Allen E, Anderson RM, Pullan RL, Njenga SM, Brooker SJ.

PLoS Negl Trop Dis. 2015 Sep 30;9(9):e0004108. doi: 10.1371/journal.pntd.0004108. eCollection 2015 Sep.

19.

A review of West Nile and Usutu virus co-circulation in Europe: how much do transmission cycles overlap?

Nikolay B.

Trans R Soc Trop Med Hyg. 2015 Oct;109(10):609-18. doi: 10.1093/trstmh/trv066. Epub 2015 Aug 17. Review.

PMID:
26286946
20.

Associations between school- and household-level water, sanitation and hygiene conditions and soil-transmitted helminth infection among Kenyan school children.

Freeman MC, Chard AN, Nikolay B, Garn JV, Okoyo C, Kihara J, Njenga SM, Pullan RL, Brooker SJ, Mwandawiro CS.

Parasit Vectors. 2015 Aug 7;8:412. doi: 10.1186/s13071-015-1024-x.

21.

Effect of Repeated Anthelminthic Treatment on Malaria in School Children in Kenya: A Randomized, Open-Label, Equivalence Trial.

Kepha S, Nuwaha F, Nikolay B, Gichuki P, Mwandawiro CS, Mwinzi PN, Odiere MR, Edwards T, Allen E, Brooker SJ.

J Infect Dis. 2016 Jan 15;213(2):266-75. doi: 10.1093/infdis/jiv382. Epub 2015 Jul 13.

22.

An investigation of the disparity in estimates of microfilaraemia and antigenaemia in lymphatic filariasis surveys.

Cano J, Moraga P, Nikolay B, Rebollo MP, Okorie PN, Davies E, Njenga SM, Bockarie MJ, Brooker SJ.

Trans R Soc Trop Med Hyg. 2015 Aug;109(8):529-31. doi: 10.1093/trstmh/trv048. Epub 2015 Jun 21. Review.

23.

Epidemiology of coinfection with soil transmitted helminths and Plasmodium falciparum among school children in Bumula District in western Kenya.

Kepha S, Nuwaha F, Nikolay B, Gichuki P, Edwards T, Allen E, Njenga SM, Mwandawiro CS, Brooker SJ.

Parasit Vectors. 2015 Jun 11;8:314. doi: 10.1186/s13071-015-0891-5.

24.

Global feasibility assessment of interrupting the transmission of soil-transmitted helminths: a statistical modelling study.

Brooker SJ, Nikolay B, Balabanova D, Pullan RL.

Lancet Infect Dis. 2015 Aug;15(8):941-50. doi: 10.1016/S1473-3099(15)70042-3. Epub 2015 Apr 14.

25.

Integrating data and resources on neglected tropical diseases for better planning: the NTD mapping tool (NTDmap.org).

Flueckiger RM, Nikolay B, Gelderblom HC, Smith JL, Haddad D, Tack W, Hendrickx G, Addiss D, Cano J, Hatcher DR, Hopkins A, Pullan RL, Pavluck A, Ottesen E, Brooker SJ.

PLoS Negl Trop Dis. 2015 Feb 5;9(2):e0003400. doi: 10.1371/journal.pntd.0003400. eCollection 2015 Feb. No abstract available.

26.

Factors associated with the performance and cost-effectiveness of using lymphatic filariasis transmission assessment surveys for monitoring soil-transmitted helminths: a case study in Kenya.

Smith JL, Sturrock HJW, Assefa L, Nikolay B, Njenga SM, Kihara J, Mwandawiro CS, Brooker SJ.

Am J Trop Med Hyg. 2015 Feb;92(2):342-353. doi: 10.4269/ajtmh.14-0435. Epub 2014 Dec 8.

27.

Sensitivity of diagnostic tests for human soil-transmitted helminth infections: a meta-analysis in the absence of a true gold standard.

Nikolay B, Brooker SJ, Pullan RL.

Int J Parasitol. 2014 Oct 1;44(11):765-74. doi: 10.1016/j.ijpara.2014.05.009. Epub 2014 Jun 30.

28.

Validation of a structural comparison of the antigenic characteristics of Usutu virus and West Nile virus envelope proteins.

Nikolay B, Fall G, Boye CS, Sall AA, Skern T.

Virus Res. 2014 Aug 30;189:87-91. doi: 10.1016/j.virusres.2014.05.018. Epub 2014 May 26.

PMID:
24874193
29.

A novel estrogen-regulated avian apolipoprotein.

Nikolay B, Plieschnig JA, Subik D, Schneider JD, Schneider WJ, Hermann M.

Biochimie. 2013 Dec;95(12):2445-53. doi: 10.1016/j.biochi.2013.09.005. Epub 2013 Sep 15.

30.

Development of a Usutu virus specific real-time reverse transcription PCR assay based on sequenced strains from Africa and Europe.

Nikolay B, Weidmann M, Dupressoir A, Faye O, Boye CS, Diallo M, Sall AA.

J Virol Methods. 2014 Mar;197:51-4. doi: 10.1016/j.jviromet.2013.08.039. Epub 2013 Sep 13.

31.

Monitoring and evaluating the impact of national school-based deworming in Kenya: study design and baseline results.

Mwandawiro CS, Nikolay B, Kihara JH, Ozier O, Mukoko DA, Mwanje MT, Hakobyan A, Pullan RL, Brooker SJ, Njenga SM.

Parasit Vectors. 2013 Jul 5;6:198. doi: 10.1186/1756-3305-6-198.

32.

Comparative full length genome sequence analysis of Usutu virus isolates from Africa.

Nikolay B, Dupressoir A, Firth C, Faye O, Boye CS, Diallo M, Sall AA.

Virol J. 2013 Jul 1;10:217. doi: 10.1186/1743-422X-10-217.

33.

Vector competence of Culex neavei (Diptera: Culicidae) for Usutu virus.

Nikolay B, Diallo M, Faye O, Boye CS, Sall AA.

Am J Trop Med Hyg. 2012 Jun;86(6):993-6. doi: 10.4269/ajtmh.2012.11-0509.

34.

Usutu virus in Africa.

Nikolay B, Diallo M, Boye CS, Sall AA.

Vector Borne Zoonotic Dis. 2011 Nov;11(11):1417-23. doi: 10.1089/vbz.2011.0631. Epub 2011 Jul 18. Review.

PMID:
21767160

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