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Modeling Host-Pathogen Interactions in the Context of the Microenvironment: Three-Dimensional Cell Culture Comes of Age.

Barrila J, Crabbé A, Yang J, Franco K, Nydam SD, Forsyth RJ, Davis RR, Gangaraju S, Ott CM, Coyne CB, Bissell MJ, Nickerson CA.

Infect Immun. 2018 Oct 25;86(11). pii: e00282-18. doi: 10.1128/IAI.00282-18. Print 2018 Nov. Review.


Mechanistic Differences in Neuropathic Pain Modalities Revealed by Correlating Behavior with Global Expression Profiling.

Cobos EJ, Nickerson CA, Gao F, Chandran V, Bravo-Caparrós I, González-Cano R, Riva P, Andrews NA, Latremoliere A, Seehus CR, Perazzoli G, Nieto FR, Joller N, Painter MW, Ma CHE, Omura T, Chesler EJ, Geschwind DH, Coppola G, Rangachari M, Woolf CJ, Costigan M.

Cell Rep. 2018 Jan 30;22(5):1301-1312. doi: 10.1016/j.celrep.2018.01.006.


Overstating the Effects of Loving-Kindness Meditation: Comment on Kok et al. (2013).

Nickerson CA.

Psychol Sci. 2018 Mar;29(3):463-466. doi: 10.1177/0956797616682946. Epub 2018 Jan 22. No abstract available.


Gene Expression Profiling and Assessment of Vitamin D and Serotonin Pathway Variations in Patients With Irritable Bowel Syndrome.

Dussik CM, Hockley M, Grozić A, Kaneko I, Zhang L, Sabir MS, Park J, Wang J, Nickerson CA, Yale SH, Rall CJ, Foxx-Orenstein AE, Borror CM, Sandrin TR, Jurutka PW.

J Neurogastroenterol Motil. 2018 Jan 30;24(1):96-106. doi: 10.5056/jnm17021.


Prenatal choline supplementation attenuates MK-801-induced deficits in memory, motor function, and hippocampal plasticity in adult male rats.

Nickerson CA, Brown AL, Yu W, Chun Y, Glenn MJ.

Neuroscience. 2017 Oct 11;361:116-128. doi: 10.1016/j.neuroscience.2017.07.071. Epub 2017 Aug 5.


Spaceflight modulates gene expression in the whole blood of astronauts.

Barrila J, Ott CM, LeBlanc C, Mehta SK, Crabbé A, Stafford P, Pierson DL, Nickerson CA.

NPJ Microgravity. 2016 Dec 8;2:16039. doi: 10.1038/npjmgrav.2016.39. eCollection 2016.


Physiological fluid shear alters the virulence potential of invasive multidrug-resistant non-typhoidal Salmonella Typhimurium D23580.

Yang J, Barrila J, Roland KL, Ott CM, Nickerson CA.

NPJ Microgravity. 2016 Jun 9;2:16021. doi: 10.1038/npjmgrav.2016.21. eCollection 2016.


Three-dimensional organotypic co-culture model of intestinal epithelial cells and macrophages to study Salmonella enterica colonization patterns.

Barrila J, Yang J, Crabbé A, Sarker SF, Liu Y, Ott CM, Nelman-Gonzalez MA, Clemett SJ, Nydam SD, Forsyth RJ, Davis RR, Crucian BE, Quiriarte H, Roland KL, Brenneman K, Sams C, Loscher C, Nickerson CA.

NPJ Microgravity. 2017 Feb 28;3:10. doi: 10.1038/s41526-017-0011-2. eCollection 2017.


Antimicrobial efficacy against Pseudomonas aeruginosa biofilm formation in a three-dimensional lung epithelial model and the influence of fetal bovine serum.

Crabbé A, Liu Y, Matthijs N, Rigole P, De La Fuente-Nùñez C, Davis R, Ledesma MA, Sarker S, Van Houdt R, Hancock RE, Coenye T, Nickerson CA.

Sci Rep. 2017 Mar 3;7:43321. doi: 10.1038/srep43321.


A Three-Dimensional Cell Culture Model To Study Enterovirus Infection of Polarized Intestinal Epithelial Cells.

Drummond CG, Nickerson CA, Coyne CB.

mSphere. 2015 Nov 18;1(1). pii: e00030-15. doi: 10.1128/mSphere.00030-15. eCollection 2016 Jan-Feb.


A three-dimensional culture system recapitulates placental syncytiotrophoblast development and microbial resistance.

McConkey CA, Delorme-Axford E, Nickerson CA, Kim KS, Sadovsky Y, Boyle JP, Coyne CB.

Sci Adv. 2016 Mar 4;2(3):e1501462. doi: 10.1126/sciadv.1501462. eCollection 2016 Mar.


Welcome statement-npj Microgravity.

Nickerson CA.

NPJ Microgravity. 2015 Jul 30;1:15006. doi: 10.1038/npjmgrav.2015.6. eCollection 2015. No abstract available.


Characterization of the Invasive, Multidrug Resistant Non-typhoidal Salmonella Strain D23580 in a Murine Model of Infection.

Yang J, Barrila J, Roland KL, Kilbourne J, Ott CM, Forsyth RJ, Nickerson CA.

PLoS Negl Trop Dis. 2015 Jun 19;9(6):e0003839. doi: 10.1371/journal.pntd.0003839. eCollection 2015 Jun.


Recellularization of decellularized lung scaffolds is enhanced by dynamic suspension culture.

Crabbé A, Liu Y, Sarker SF, Bonenfant NR, Barrila J, Borg ZD, Lee JJ, Weiss DJ, Nickerson CA.

PLoS One. 2015 May 11;10(5):e0126846. doi: 10.1371/journal.pone.0126846. eCollection 2015.


Effects of sex and gender on adaptation to space: immune system.

Kennedy AR, Crucian B, Huff JL, Klein SL, Morens D, Murasko D, Nickerson CA, Sonnenfeld G.

J Womens Health (Larchmt). 2014 Nov;23(11):956-8. doi: 10.1089/jwh.2014.4913. Review.


No empirical evidence for critical positivity ratios.

Nickerson CA.

Am Psychol. 2014 Sep;69(6):626-8. doi: 10.1037/a0036961.


Conservation of the Low-shear Modeled Microgravity Response in Enterobacteriaceae and Analysis of the trp Genes in this Response.

Soni A, O'Sullivan L, Quick LN, Ott CM, Nickerson CA, Wilson JW.

Open Microbiol J. 2014 Jun 13;8:51-8. doi: 10.2174/1874285801408010051. eCollection 2014.


Mimicking the host and its microenvironment in vitro for studying mucosal infections by Pseudomonas aeruginosa.

Crabbé A, Ledesma MA, Nickerson CA.

Pathog Dis. 2014 Jun;71(1):1-19. doi: 10.1111/2049-632X.12180. Epub 2014 May 23. Review.


Spaceflight enhances cell aggregation and random budding in Candida albicans.

Crabbé A, Nielsen-Preiss SM, Woolley CM, Barrila J, Buchanan K, McCracken J, Inglis DO, Searles SC, Nelman-Gonzalez MA, Ott CM, Wilson JW, Pierson DL, Stefanyshyn-Piper HM, Hyman LE, Nickerson CA.

PLoS One. 2013 Dec 4;8(12):e80677. doi: 10.1371/journal.pone.0080677. eCollection 2013.


Lack of norovirus replication and histo-blood group antigen expression in 3-dimensional intestinal epithelial cells.

Herbst-Kralovetz MM, Radtke AL, Lay MK, Hjelm BE, Bolick AN, Sarker SS, Atmar RL, Kingsley DH, Arntzen CJ, Estes MK, Nickerson CA.

Emerg Infect Dis. 2013 Mar;19(3):431-8. doi: 10.3201/eid1903.121029.


Glycerol supplementation enhances L. reuteri's protective effect against S. Typhimurium colonization in a 3-D model of colonic epithelium.

De Weirdt R, Crabbé A, Roos S, Vollenweider S, Lacroix C, van Pijkeren JP, Britton RA, Sarker S, Van de Wiele T, Nickerson CA.

PLoS One. 2012;7(5):e37116. doi: 10.1371/journal.pone.0037116. Epub 2012 May 31.


New insights into the bacterial fitness-associated mechanisms revealed by the characterization of large plasmids of an avian pathogenic E. coli.

Mellata M, Maddux JT, Nam T, Thomson N, Hauser H, Stevens MP, Mukhopadhyay S, Sarker S, Crabbé A, Nickerson CA, Santander J, Curtiss R 3rd.

PLoS One. 2012;7(1):e29481. doi: 10.1371/journal.pone.0029481. Epub 2012 Jan 4.


Evaluation of microorganisms cultured from injured and repressed tissue regeneration sites in endangered giant aquatic Ozark Hellbender salamanders.

Nickerson CA, Ott CM, Castro SL, Garcia VM, Molina TC, Briggler JT, Pitt AL, Tavano JJ, Byram JK, Barrila J, Nickerson MA.

PLoS One. 2011;6(12):e28906. doi: 10.1371/journal.pone.0028906. Epub 2011 Dec 19.


Induction of attachment-independent biofilm formation and repression of Hfq expression by low-fluid-shear culture of Staphylococcus aureus.

Castro SL, Nelman-Gonzalez M, Nickerson CA, Ott CM.

Appl Environ Microbiol. 2011 Sep;77(18):6368-78. doi: 10.1128/AEM.00175-11. Epub 2011 Jul 29.


Characterization of the Salmonella enterica serovar Typhimurium ydcI gene, which encodes a conserved DNA binding protein required for full acid stress resistance.

Jennings ME, Quick LN, Soni A, Davis RR, Crosby K, Ott CM, Nickerson CA, Wilson JW.

J Bacteriol. 2011 May;193(9):2208-17. doi: 10.1128/JB.01335-10. Epub 2011 Mar 11.


Analysis of interactions of Salmonella type three secretion mutants with 3-D intestinal epithelial cells.

Radtke AL, Wilson JW, Sarker S, Nickerson CA.

PLoS One. 2010 Dec 29;5(12):e15750. doi: 10.1371/journal.pone.0015750.


Transcriptional and proteomic responses of Pseudomonas aeruginosa PAO1 to spaceflight conditions involve Hfq regulation and reveal a role for oxygen.

Crabbé A, Schurr MJ, Monsieurs P, Morici L, Schurr J, Wilson JW, Ott CM, Tsaprailis G, Pierson DL, Stefanyshyn-Piper H, Nickerson CA.

Appl Environ Microbiol. 2011 Feb;77(4):1221-30. doi: 10.1128/AEM.01582-10. Epub 2010 Dec 17.


Alveolar epithelium protects macrophages from quorum sensing-induced cytotoxicity in a three-dimensional co-culture model.

Crabbé A, Sarker SF, Van Houdt R, Ott CM, Leys N, Cornelis P, Nickerson CA.

Cell Microbiol. 2011 Mar;13(3):469-81. doi: 10.1111/j.1462-5822.2010.01548.x. Epub 2010 Nov 25.


Organotypic 3D cell culture models: using the rotating wall vessel to study host-pathogen interactions.

Barrila J, Radtke AL, Crabbé A, Sarker SF, Herbst-Kralovetz MM, Ott CM, Nickerson CA.

Nat Rev Microbiol. 2010 Nov;8(11):791-801. doi: 10.1038/nrmicro2423. Review.


The generation of 3-D tissue models based on hyaluronan hydrogel-coated microcarriers within a rotating wall vessel bioreactor.

Skardal A, Sarker SF, Crabbé A, Nickerson CA, Prestwich GD.

Biomaterials. 2010 Nov;31(32):8426-35. doi: 10.1016/j.biomaterials.2010.07.047. Epub 2010 Aug 7.


A series of IncQ-based reporter plasmids for use in a range of Gram negative genera.

O'Sullivan LE, Nickerson CA, Wilson JW.

J Microbiol Biotechnol. 2010 May;20(5):871-4.


Development and characterization of a three-dimensional organotypic human vaginal epithelial cell model.

Hjelm BE, Berta AN, Nickerson CA, Arntzen CJ, Herbst-Kralovetz MM.

Biol Reprod. 2010 Mar;82(3):617-27. doi: 10.1095/biolreprod.109.080408. Epub 2009 Dec 9.


Media ion composition controls regulatory and virulence response of Salmonella in spaceflight.

Wilson JW, Ott CM, Quick L, Davis R, Höner zu Bentrup K, Crabbé A, Richter E, Sarker S, Barrila J, Porwollik S, Cheng P, McClelland M, Tsaprailis G, Radabaugh T, Hunt A, Shah M, Nelman-Gonzalez M, Hing S, Parra M, Dumars P, Norwood K, Bober R, Devich J, Ruggles A, CdeBaca A, Narayan S, Benjamin J, Goulart C, Rupert M, Catella L, Schurr MJ, Buchanan K, Morici L, McCracken J, Porter MD, Pierson DL, Smith SM, Mergeay M, Leys N, Stefanyshyn-Piper HM, Gorie D, Nickerson CA.

PLoS One. 2008;3(12):e3923. doi: 10.1371/journal.pone.0003923. Epub 2008 Dec 12.


Closing the phenotypic gap between transformed neuronal cell lines in culture and untransformed neurons.

Myers TA, Nickerson CA, Kaushal D, Ott CM, Höner zu Bentrup K, Ramamurthy R, Nelman-Gonzalez M, Pierson DL, Philipp MT.

J Neurosci Methods. 2008 Sep 15;174(1):31-41. doi: 10.1016/j.jneumeth.2008.06.031. Epub 2008 Jul 10.


Skim milk enhances the preservation of thawed -80 degrees C bacterial stocks.

Cody WL, Wilson JW, Hendrixson DR, McIver KS, Hagman KE, Ott CM, Nickerson CA, Schurr MJ.

J Microbiol Methods. 2008 Sep;75(1):135-8. doi: 10.1016/j.mimet.2008.05.006. Epub 2008 May 14.


In vivo excision, cloning, and broad-host-range transfer of large bacterial DNA segments using VEX-Capture.

Wilson JW, Nickerson CA.

Methods Mol Biol. 2007;394:105-18. doi: 10.1007/978-1-59745-512-1_7.


Studying host-pathogen interactions in 3-D: organotypic models for infectious disease and drug development.

Nickerson CA, Richter EG, Ott CM.

J Neuroimmune Pharmacol. 2007 Mar;2(1):26-31. Epub 2006 Dec 6. Review.


Space flight alters bacterial gene expression and virulence and reveals a role for global regulator Hfq.

Wilson JW, Ott CM, Höner zu Bentrup K, Ramamurthy R, Quick L, Porwollik S, Cheng P, McClelland M, Tsaprailis G, Radabaugh T, Hunt A, Fernandez D, Richter E, Shah M, Kilcoyne M, Joshi L, Nelman-Gonzalez M, Hing S, Parra M, Dumars P, Norwood K, Bober R, Devich J, Ruggles A, Goulart C, Rupert M, Stodieck L, Stafford P, Catella L, Schurr MJ, Buchanan K, Morici L, McCracken J, Allen P, Baker-Coleman C, Hammond T, Vogel J, Nelson R, Pierson DL, Stefanyshyn-Piper HM, Nickerson CA.

Proc Natl Acad Sci U S A. 2007 Oct 9;104(41):16299-304. Epub 2007 Sep 27.


Cloning and transfer of the Salmonella pathogenicity island 2 type III secretion system for studies of a range of gram-negative genera.

Wilson JW, Coleman C, Nickerson CA.

Appl Environ Microbiol. 2007 Sep;73(18):5911-8. Epub 2007 Aug 3.


In vitro cell culture infectivity assay for human noroviruses.

Straub TM, Höner zu Bentrup K, Orosz-Coghlan P, Dohnalkova A, Mayer BK, Bartholomew RA, Valdez CO, Bruckner-Lea CJ, Gerba CP, Abbaszadegan M, Nickerson CA.

Emerg Infect Dis. 2007 Mar;13(3):396-403.


Role of RpoS in fine-tuning the synthesis of Vi capsular polysaccharide in Salmonella enterica serotype Typhi.

Santander J, Wanda SY, Nickerson CA, Curtiss R 3rd.

Infect Immun. 2007 Mar;75(3):1382-92. Epub 2006 Dec 18.


Novel quantitative biosystem for modeling physiological fluid shear stress on cells.

Nauman EA, Ott CM, Sander E, Tucker DL, Pierson D, Wilson JW, Nickerson CA.

Appl Environ Microbiol. 2007 Feb;73(3):699-705. Epub 2006 Dec 1.


Three-dimensional organotypic models of human colonic epithelium to study the early stages of enteric salmonellosis.

Höner zu Bentrup K, Ramamurthy R, Ott CM, Emami K, Nelman-Gonzalez M, Wilson JW, Richter EG, Goodwin TJ, Alexander JS, Pierson DL, Pellis N, Buchanan KL, Nickerson CA.

Microbes Infect. 2006 Jun;8(7):1813-25. Epub 2006 Apr 27.


Three-dimensional growth of extravillous cytotrophoblasts promotes differentiation and invasion.

LaMarca HL, Ott CM, Höner Zu Bentrup K, Leblanc CL, Pierson DL, Nelson AB, Scandurro AB, Whitley GS, Nickerson CA, Morris CA.

Placenta. 2005 Nov;26(10):709-20. Epub 2005 Jan 25.


Homozygous diploid deletion strains of Saccharomyces cerevisiae that determine lag phase and dehydration tolerance.

D'Elia R, Allen PL, Johanson K, Nickerson CA, Hammond TG.

Appl Microbiol Biotechnol. 2005 Jun;67(6):816-26. Epub 2004 Dec 10.


A549 lung epithelial cells grown as three-dimensional aggregates: alternative tissue culture model for Pseudomonas aeruginosa pathogenesis.

Carterson AJ, Höner zu Bentrup K, Ott CM, Clarke MS, Pierson DL, Vanderburg CR, Buchanan KL, Nickerson CA, Schurr MJ.

Infect Immun. 2005 Feb;73(2):1129-40.


Microbial responses to microgravity and other low-shear environments.

Nickerson CA, Ott CM, Wilson JW, Ramamurthy R, Pierson DL.

Microbiol Mol Biol Rev. 2004 Jun;68(2):345-61. Review.


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