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Items: 1 to 50 of 142

1.

Mitovirus and Mitochondrial Coding Sequences from Basal Fungus Entomophthora muscae.

Nibert ML, Debat HJ, Manny AR, Grigoriev IV, De Fine Licht HH.

Viruses. 2019 Apr 17;11(4). pii: E351. doi: 10.3390/v11040351.

2.

Beta vulgaris mitovirus 1 in diverse cultivars of beet and chard.

Vong M, Manny AR, Smith KL, Gao W, Nibert ML.

Virus Res. 2019 May;265:80-87. doi: 10.1016/j.virusres.2019.02.008. Epub 2019 Mar 8.

PMID:
30853586
3.

Changes to taxonomy and the International Code of Virus Classification and Nomenclature ratified by the International Committee on Taxonomy of Viruses (2018).

King AMQ, Lefkowitz EJ, Mushegian AR, Adams MJ, Dutilh BE, Gorbalenya AE, Harrach B, Harrison RL, Junglen S, Knowles NJ, Kropinski AM, Krupovic M, Kuhn JH, Nibert ML, Rubino L, Sabanadzovic S, Sanfaçon H, Siddell SG, Simmonds P, Varsani A, Zerbini FM, Davison AJ.

Arch Virol. 2018 Sep;163(9):2601-2631. doi: 10.1007/s00705-018-3847-1. Epub 2018 May 12.

PMID:
29754305
4.

A barnavirus sequence mined from a transcriptome of the Antarctic pearlwort Colobanthus quitensis.

Nibert ML, Manny AR, Debat HJ, Firth AE, Bertini L, Caruso C.

Arch Virol. 2018 Jul;163(7):1921-1926. doi: 10.1007/s00705-018-3794-x. Epub 2018 Mar 7.

5.

The dynamics of both filamentous and globular mammalian reovirus viral factories rely on the microtubule network.

Eichwald C, Ackermann M, Nibert ML.

Virology. 2018 May;518:77-86. doi: 10.1016/j.virol.2018.02.009. Epub 2018 Feb 20.

6.

Evidence for contemporary plant mitoviruses.

Nibert ML, Vong M, Fugate KK, Debat HJ.

Virology. 2018 May;518:14-24. doi: 10.1016/j.virol.2018.02.005. Epub 2018 Feb 12.

7.

Dissection of mammalian orthoreovirus µ2 reveals a self-associative domain required for binding to microtubules but not to factory matrix protein µNS.

Eichwald C, Kim J, Nibert ML.

PLoS One. 2017 Sep 7;12(9):e0184356. doi: 10.1371/journal.pone.0184356. eCollection 2017.

8.

Complete cryspovirus genome sequences from Cryptosporidium parvum isolate Iowa.

Vong M, Ludington JG, Ward HD, Nibert ML.

Arch Virol. 2017 Sep;162(9):2875-2879. doi: 10.1007/s00705-017-3385-2. Epub 2017 May 5.

9.

Mitovirus UGA(Trp) codon usage parallels that of host mitochondria.

Nibert ML.

Virology. 2017 Jul;507:96-100. doi: 10.1016/j.virol.2017.04.010. Epub 2017 Apr 18.

10.

Amalga-like virus infecting Antonospora locustae, a microsporidian pathogen of grasshoppers, plus related viruses associated with other arthropods.

Pyle JD, Keeling PJ, Nibert ML.

Virus Res. 2017 Apr 2;233:95-104. doi: 10.1016/j.virusres.2017.02.015. Epub 2017 Mar 4.

11.

Consensus statement: Virus taxonomy in the age of metagenomics.

Simmonds P, Adams MJ, Benkő M, Breitbart M, Brister JR, Carstens EB, Davison AJ, Delwart E, Gorbalenya AE, Harrach B, Hull R, King AM, Koonin EV, Krupovic M, Kuhn JH, Lefkowitz EJ, Nibert ML, Orton R, Roossinck MJ, Sabanadzovic S, Sullivan MB, Suttle CA, Tesh RB, van der Vlugt RA, Varsani A, Zerbini FM.

Nat Rev Microbiol. 2017 Mar;15(3):161-168. doi: 10.1038/nrmicro.2016.177. Epub 2017 Jan 3.

PMID:
28134265
12.

50 years of the International Committee on Taxonomy of Viruses: progress and prospects.

Adams MJ, Lefkowitz EJ, King AM, Harrach B, Harrison RL, Knowles NJ, Kropinski AM, Krupovic M, Kuhn JH, Mushegian AR, Nibert ML, Sabanadzovic S, Sanfaçon H, Siddell SG, Simmonds P, Varsani A, Zerbini FM, Orton RJ, Smith DB, Gorbalenya AE, Davison AJ.

Arch Virol. 2017 May;162(5):1441-1446. doi: 10.1007/s00705-016-3215-y. Epub 2017 Jan 11.

PMID:
28078475
13.

A +1 ribosomal frameshifting motif prevalent among plant amalgaviruses.

Nibert ML, Pyle JD, Firth AE.

Virology. 2016 Nov;498:201-208. doi: 10.1016/j.virol.2016.07.002. Epub 2016 Sep 4.

14.

Nucleotide sequence of Zygosaccharomyces bailii virus Z: Evidence for +1 programmed ribosomal frameshifting and for assignment to family Amalgaviridae.

Depierreux D, Vong M, Nibert ML.

Virus Res. 2016 Jun 2;217:115-24. doi: 10.1016/j.virusres.2016.02.008. Epub 2016 Mar 4.

15.

Multitarget, quantitative nanoplasmonic electrical field-enhanced resonating device (NE2RD) for diagnostics.

Inci F, Filippini C, Baday M, Ozen MO, Calamak S, Durmus NG, Wang S, Hanhauser E, Hobbs KS, Juillard F, Kuang PP, Vetter ML, Carocci M, Yamamoto HS, Takagi Y, Yildiz UH, Akin D, Wesemann DR, Singhal A, Yang PL, Nibert ML, Fichorova RN, Lau DT, Henrich TJ, Kaye KM, Schachter SC, Kuritzkes DR, Steinmetz LM, Gambhir SS, Davis RW, Demirci U.

Proc Natl Acad Sci U S A. 2015 Aug 11;112(32):E4354-63. doi: 10.1073/pnas.1510824112. Epub 2015 Jul 20.

16.

Extended genome sequences of penaeid shrimp infectious myonecrosis virus strains from Brazil and Indonesia.

Naim S, Tang KF, Yang M, Lightner DV, Nibert ML.

Arch Virol. 2015 Jun;160(6):1579-83. doi: 10.1007/s00705-015-2406-2. Epub 2015 Apr 1.

PMID:
25877821
17.

50-plus years of fungal viruses.

Ghabrial SA, Castón JR, Jiang D, Nibert ML, Suzuki N.

Virology. 2015 May;479-480:356-68. doi: 10.1016/j.virol.2015.02.034. Epub 2015 Mar 13. Review.

18.

An RNA cassette from Helminthosporium victoriae virus 190S necessary and sufficient for stop/restart translation.

Li H, Havens WM, Nibert ML, Ghabrial SA.

Virology. 2015 Jan 1;474:131-43. doi: 10.1016/j.virol.2014.10.022. Epub 2014 Nov 15.

19.

Three-dimensional structure of a protozoal double-stranded RNA virus that infects the enteric pathogen Giardia lamblia.

Janssen ME, Takagi Y, Parent KN, Cardone G, Nibert ML, Baker TS.

J Virol. 2015 Jan 15;89(2):1182-94. doi: 10.1128/JVI.02745-14. Epub 2014 Nov 5.

20.

Genetic diversification of penaeid shrimp infectious myonecrosis virus between Indonesia and Brazil.

Naim S, Brown JK, Nibert ML.

Virus Res. 2014 Aug 30;189:97-105. doi: 10.1016/j.virusres.2014.05.013. Epub 2014 May 26.

PMID:
24874195
21.

Taxonomic reorganization of family Partitiviridae and other recent progress in partitivirus research.

Nibert ML, Ghabrial SA, Maiss E, Lesker T, Vainio EJ, Jiang D, Suzuki N.

Virus Res. 2014 Aug 8;188:128-41. doi: 10.1016/j.virusres.2014.04.007. Epub 2014 Apr 21. Review.

PMID:
24768846
22.

The villain team-up or how Trichomonas vaginalis and bacterial vaginosis alter innate immunity in concert.

Fichorova RN, Buck OR, Yamamoto HS, Fashemi T, Dawood HY, Fashemi B, Hayes GR, Beach DH, Takagi Y, Delaney ML, Nibert ML, Singh BN, Onderdonk AB.

Sex Transm Infect. 2013 Sep;89(6):460-6. doi: 10.1136/sextrans-2013-051052. Epub 2013 Jul 31.

23.
24.

Engineering recombinant reoviruses with tandem repeats and a tetravirus 2A-like element for exogenous polypeptide expression.

Demidenko AA, Blattman JN, Blattman NN, Greenberg PD, Nibert ML.

Proc Natl Acad Sci U S A. 2013 May 14;110(20):E1867-76. doi: 10.1073/pnas.1220107110. Epub 2013 Apr 29.

25.

Structure of a protozoan virus from the human genitourinary parasite Trichomonas vaginalis.

Parent KN, Takagi Y, Cardone G, Olson NH, Ericsson M, Yang M, Lee Y, Asara JM, Fichorova RN, Baker TS, Nibert ML.

MBio. 2013 Apr 2;4(2). pii: e00056-13. doi: 10.1128/mBio.00056-13.

26.

Three-dimensional structure of victorivirus HvV190S suggests coat proteins in most totiviruses share a conserved core.

Dunn SE, Li H, Cardone G, Nibert ML, Ghabrial SA, Baker TS.

PLoS Pathog. 2013 Mar;9(3):e1003225. doi: 10.1371/journal.ppat.1003225. Epub 2013 Mar 14.

27.

3D structures of fungal partitiviruses.

Nibert ML, Tang J, Xie J, Collier AM, Ghabrial SA, Baker TS, Tao YJ.

Adv Virus Res. 2013;86:59-85. doi: 10.1016/B978-0-12-394315-6.00003-9. Review.

28.

Similar uptake but different trafficking and escape routes of reovirus virions and infectious subvirion particles imaged in polarized Madin-Darby canine kidney cells.

Boulant S, Stanifer M, Kural C, Cureton DK, Massol R, Nibert ML, Kirchhausen T.

Mol Biol Cell. 2013 Apr;24(8):1196-207. doi: 10.1091/mbc.E12-12-0852. Epub 2013 Feb 20.

29.

Piscine reovirus encodes a cytotoxic, non-fusogenic, integral membrane protein and previously unrecognized virion outer-capsid proteins.

Key T, Read J, Nibert ML, Duncan R.

J Gen Virol. 2013 May;94(Pt 5):1039-50. doi: 10.1099/vir.0.048637-0. Epub 2013 Jan 23.

PMID:
23343626
30.

Endobiont viruses sensed by the human host - beyond conventional antiparasitic therapy.

Fichorova RN, Lee Y, Yamamoto HS, Takagi Y, Hayes GR, Goodman RP, Chepa-Lotrea X, Buck OR, Murray R, Kula T, Beach DH, Singh BN, Nibert ML.

PLoS One. 2012;7(11):e48418. doi: 10.1371/journal.pone.0048418. Epub 2012 Nov 7.

31.

Fibers come and go: differences in cell-entry components among related dsRNA viruses.

Nibert ML, Takagi Y.

Curr Opin Virol. 2013 Feb;3(1):20-6. doi: 10.1016/j.coviro.2012.10.006. Epub 2012 Nov 3. Review.

PMID:
23128047
32.

Recruitment of cellular clathrin to viral factories and disruption of clathrin-dependent trafficking.

Ivanovic T, Boulant S, Ehrlich M, Demidenko AA, Arnold MM, Kirchhausen T, Nibert ML.

Traffic. 2011 Sep;12(9):1179-95. doi: 10.1111/j.1600-0854.2011.01233.x. Epub 2011 Jul 7.

33.

Effects of viscogens on RNA transcription inside reovirus particles.

Demidenko AA, Lee J, Powers TR, Nibert ML.

J Biol Chem. 2011 Aug 26;286(34):29521-30. doi: 10.1074/jbc.M111.241703. Epub 2011 Jun 30.

34.

Electron Cryo-Microscopy Studies of Helminthosporium victoriae Virus 190S.

Dunn SE, Li H, Nibert ML, Ghabrial SA, Baker TS.

Microsc Microanal. 2011 Jul;17(Suppl 2):134-135. No abstract available.

35.

Virion structure of baboon reovirus, a fusogenic orthoreovirus that lacks an adhesion fiber.

Yan X, Parent KN, Goodman RP, Tang J, Shou J, Nibert ML, Duncan R, Baker TS.

J Virol. 2011 Aug;85(15):7483-95. doi: 10.1128/JVI.00729-11. Epub 2011 May 18.

37.

Clinical isolates of Trichomonas vaginalis concurrently infected by strains of up to four Trichomonasvirus species (Family Totiviridae).

Goodman RP, Freret TS, Kula T, Geller AM, Talkington MW, Tang-Fernandez V, Suciu O, Demidenko AA, Ghabrial SA, Beach DH, Singh BN, Fichorova RN, Nibert ML.

J Virol. 2011 May;85(9):4258-70. doi: 10.1128/JVI.00220-11. Epub 2011 Feb 23.

38.

Trichomonasvirus: a new genus of protozoan viruses in the family Totiviridae.

Goodman RP, Ghabrial SA, Fichorova RN, Nibert ML.

Arch Virol. 2011 Jan;156(1):171-9. doi: 10.1007/s00705-010-0832-8. Epub 2010 Oct 26. No abstract available.

39.

Backbone trace of partitivirus capsid protein from electron cryomicroscopy and homology modeling.

Tang J, Pan J, Havens WM, Ochoa WF, Guu TS, Ghabrial SA, Nibert ML, Tao YJ, Baker TS.

Biophys J. 2010 Jul 21;99(2):685-94. doi: 10.1016/j.bpj.2010.04.058.

40.

Structure of Fusarium poae virus 1 shows conserved and variable elements of partitivirus capsids and evolutionary relationships to picobirnavirus.

Tang J, Ochoa WF, Li H, Havens WM, Nibert ML, Ghabrial SA, Baker TS.

J Struct Biol. 2010 Dec;172(3):363-71. doi: 10.1016/j.jsb.2010.06.022. Epub 2010 Jul 3.

41.

Peroxisomes are signaling platforms for antiviral innate immunity.

Dixit E, Boulant S, Zhang Y, Lee AS, Odendall C, Shum B, Hacohen N, Chen ZJ, Whelan SP, Fransen M, Nibert ML, Superti-Furga G, Kagan JC.

Cell. 2010 May 14;141(4):668-81. doi: 10.1016/j.cell.2010.04.018. Epub 2010 May 6.

42.

Localization of mammalian orthoreovirus proteins to cytoplasmic factory-like structures via nonoverlapping regions of microNS.

Miller CL, Arnold MM, Broering TJ, Hastings CE, Nibert ML.

J Virol. 2010 Jan;84(2):867-82. doi: 10.1128/JVI.01571-09. Epub 2009 Nov 4.

43.

Cryspovirus: a new genus of protozoan viruses in the family Partitiviridae.

Nibert ML, Woods KM, Upton SJ, Ghabrial SA.

Arch Virol. 2009;154(12):1959-65. doi: 10.1007/s00705-009-0513-7. Epub 2009 Oct 25.

PMID:
19856142
44.

Protein interaction platforms: visualization of interacting proteins in yeast.

Schmitz AM, Morrison MF, Agunwamba AO, Nibert ML, Lesser CF.

Nat Methods. 2009 Jul;6(7):500-2. doi: 10.1038/nmeth.1337. Epub 2009 May 31.

45.

Requirements for the formation of membrane pores by the reovirus myristoylated micro1N peptide.

Zhang L, Agosto MA, Ivanovic T, King DS, Nibert ML, Harrison SC.

J Virol. 2009 Jul;83(14):7004-14. doi: 10.1128/JVI.00377-09. Epub 2009 May 13.

46.

Probing the transcription mechanisms of reovirus cores with molecules that alter RNA duplex stability.

Demidenko AA, Nibert ML.

J Virol. 2009 Jun;83(11):5659-70. doi: 10.1128/JVI.02192-08. Epub 2009 Mar 18.

47.

Atomic structure reveals the unique capsid organization of a dsRNA virus.

Pan J, Dong L, Lin L, Ochoa WF, Sinkovits RS, Havens WM, Nibert ML, Baker TS, Ghabrial SA, Tao YJ.

Proc Natl Acad Sci U S A. 2009 Mar 17;106(11):4225-30. doi: 10.1073/pnas.0812071106. Epub 2009 Feb 25.

48.

Victorivirus, a new genus of fungal viruses in the family Totiviridae.

Ghabrial SA, Nibert ML.

Arch Virol. 2009;154(2):373-9. doi: 10.1007/s00705-008-0272-x. Epub 2008 Dec 24.

PMID:
19107323
49.

Mechanism for coordinated RNA packaging and genome replication by rotavirus polymerase VP1.

Lu X, McDonald SM, Tortorici MA, Tao YJ, Vasquez-Del Carpio R, Nibert ML, Patton JT, Harrison SC.

Structure. 2008 Nov 12;16(11):1678-88. doi: 10.1016/j.str.2008.09.006.

50.

Infectious myonecrosis virus has a totivirus-like, 120-subunit capsid, but with fiber complexes at the fivefold axes.

Tang J, Ochoa WF, Sinkovits RS, Poulos BT, Ghabrial SA, Lightner DV, Baker TS, Nibert ML.

Proc Natl Acad Sci U S A. 2008 Nov 11;105(45):17526-31. doi: 10.1073/pnas.0806724105. Epub 2008 Nov 3.

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