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Items: 28

1.

Molecular characterization of rotavirus group A strains circulating prior to vaccine introduction in rural coastal Kenya, 2002-2013.

Owor BE, Mwanga MJ, Njeru R, Mugo R, Ngama M, Otieno GP, Nokes DJ, Agoti CN.

Version 2. Wellcome Open Res. 2019 May 15 [revised 2019 Jan 1];3:150. doi: 10.12688/wellcomeopenres.14908.2. eCollection 2018.

2.

Erratum: Whole genome analysis of local Kenyan and global sequences unravels the epidemiological and molecular evolutionary dynamics of RSV genotype ON1 strains.

Otieno JR, Kamau EM, Oketch JW, Ngoi JM, Gichuki AM, Binter Š, Otieno GP, Ngama M, Agoti CN, Cane PA, Kellam P, Cotten M, Lemey P, Nokes DJ.

Virus Evol. 2018 Nov 16;4(2):vey036. doi: 10.1093/ve/vey036. eCollection 2018 Jul.

3.

Whole genome analysis of local Kenyan and global sequences unravels the epidemiological and molecular evolutionary dynamics of RSV genotype ON1 strains.

Otieno JR, Kamau EM, Oketch JW, Ngoi JM, Gichuki AM, Binter Š, Otieno GP, Ngama M, Agoti CN, Cane PA, Kellam P, Cotten M, Lemey P, Nokes DJ.

Virus Evol. 2018 Sep 24;4(2):vey027. doi: 10.1093/ve/vey027. eCollection 2018 Jul. Erratum in: Virus Evol. 2018 Nov 16;4(2):vey036.

4.

A49 Molecular evolutionary dynamics of respiratory syncytial virus group A in recurrent epidemics in coastal Kenya.

Otieno JR, Agoti CN, Gitahi CW, Bett A, Ngama M, Medley GF, Cane PA, Nokes DJ.

Virus Evol. 2017 Mar 5;3(Suppl 1). pii: vew036.048. doi: 10.1093/ve/vew036.048. eCollection 2017 Mar. No abstract available.

5.

Mortality after Inpatient Treatment for Severe Pneumonia in Children: a Cohort Study.

Ngari MM, Fegan G, Mwangome MK, Ngama MJ, Mturi N, Scott JAG, Bauni E, Nokes DJ, Berkley JA.

Paediatr Perinat Epidemiol. 2017 May;31(3):233-242. doi: 10.1111/ppe.12348. Epub 2017 Mar 20.

6.

Spread and Evolution of Respiratory Syncytial Virus A Genotype ON1, Coastal Kenya, 2010-2015.

Otieno JR, Kamau EM, Agoti CN, Lewa C, Otieno G, Bett A, Ngama M, Cane PA, Nokes DJ.

Emerg Infect Dis. 2017 Feb;23(2):264-271. doi: 10.3201/eid2302.161149.

7.

Molecular Evolutionary Dynamics of Respiratory Syncytial Virus Group A in Recurrent Epidemics in Coastal Kenya.

Otieno JR, Agoti CN, Gitahi CW, Bett A, Ngama M, Medley GF, Cane PA, Nokes DJ.

J Virol. 2016 Apr 29;90(10):4990-5002. doi: 10.1128/JVI.03105-15. Print 2016 May 15.

8.

Successive Respiratory Syncytial Virus Epidemics in Local Populations Arise from Multiple Variant Introductions, Providing Insights into Virus Persistence.

Agoti CN, Otieno JR, Ngama M, Mwihuri AG, Medley GF, Cane PA, Nokes DJ.

J Virol. 2015 Nov;89(22):11630-42. doi: 10.1128/JVI.01972-15. Epub 2015 Sep 9.

9.

Estimation of the national disease burden of influenza-associated severe acute respiratory illness in Kenya and Guatemala: a novel methodology.

Fuller JA, Summers A, Katz MA, Lindblade KA, Njuguna H, Arvelo W, Khagayi S, Emukule G, Linares-Perez N, McCracken J, Nokes DJ, Ngama M, Kazungu S, Mott JA, Olsen SJ, Widdowson MA, Feikin DR.

PLoS One. 2013;8(2):e56882. doi: 10.1371/journal.pone.0056882. Epub 2013 Feb 27.

10.

Severe lower respiratory tract infection in early infancy and pneumonia hospitalizations among children, Kenya.

Munywoki PK, Ohuma EO, Ngama M, Bauni E, Scott JA, Nokes DJ.

Emerg Infect Dis. 2013 Feb;19(2):223-9. doi: 10.3201/eid1902.120940.

11.

The incidence and clinical burden of respiratory syncytial virus disease identified through hospital outpatient presentations in Kenyan children.

Okiro EA, Ngama M, Bett A, Nokes DJ.

PLoS One. 2012;7(12):e52520. doi: 10.1371/journal.pone.0052520. Epub 2012 Dec 26.

12.

A cost effectiveness and capacity analysis for the introduction of universal rotavirus vaccination in Kenya: comparison between Rotarix and RotaTeq vaccines.

van Hoek AJ, Ngama M, Ismail A, Chuma J, Cheburet S, Mutonga D, Kamau T, Nokes DJ.

PLoS One. 2012;7(10):e47511. doi: 10.1371/journal.pone.0047511. Epub 2012 Oct 24. Erratum in: PLoS One. 2012;7(11). doi: 10.1371/annotation/6b9d910e-4c85-41ca-ae56-b5996e81820a.

13.

Treatment failure among Kenyan children with severe pneumonia--a cohort study.

Webb C, Ngama M, Ngatia A, Shebbe M, Morpeth S, Mwarumba S, Bett A, Nokes DJ, Seale AC, Kazungu S, Munywoki P, Hammitt LL, Scott JA, Berkley JA.

Pediatr Infect Dis J. 2012 Sep;31(9):e152-7. doi: 10.1097/INF.0b013e3182638012.

14.

Molecular epidemiology of human rhinovirus infections in Kilifi, coastal Kenya.

Onyango CO, Welch SR, Munywoki PK, Agoti CN, Bett A, Ngama M, Myers R, Cane PA, Nokes DJ.

J Med Virol. 2012 May;84(5):823-31. doi: 10.1002/jmv.23251.

15.

Viral etiology of severe pneumonia among Kenyan infants and children.

Berkley JA, Munywoki P, Ngama M, Kazungu S, Abwao J, Bett A, Lassauniére R, Kresfelder T, Cane PA, Venter M, Scott JA, Nokes DJ.

JAMA. 2010 May 26;303(20):2051-7. doi: 10.1001/jama.2010.675. Erratum in: JAMA. 2010 Jun 23;303(24):2477.

16.

Global burden of acute lower respiratory infections due to respiratory syncytial virus in young children: a systematic review and meta-analysis.

Nair H, Nokes DJ, Gessner BD, Dherani M, Madhi SA, Singleton RJ, O'Brien KL, Roca A, Wright PF, Bruce N, Chandran A, Theodoratou E, Sutanto A, Sedyaningsih ER, Ngama M, Munywoki PK, Kartasasmita C, Simões EA, Rudan I, Weber MW, Campbell H.

Lancet. 2010 May 1;375(9725):1545-55. doi: 10.1016/S0140-6736(10)60206-1. Review.

17.

Duration of shedding of respiratory syncytial virus in a community study of Kenyan children.

Okiro EA, White LJ, Ngama M, Cane PA, Medley GF, Nokes DJ.

BMC Infect Dis. 2010 Jan 22;10:15. doi: 10.1186/1471-2334-10-15.

18.

Incidence and severity of respiratory syncytial virus pneumonia in rural Kenyan children identified through hospital surveillance.

Nokes DJ, Ngama M, Bett A, Abwao J, Munywoki P, English M, Scott JA, Cane PA, Medley GF.

Clin Infect Dis. 2009 Nov 1;49(9):1341-9. doi: 10.1086/606055.

19.

Emergency triage assessment for hypoxaemia in neonates and young children in a Kenyan hospital: an observational study.

Mwaniki MK, Nokes DJ, Ignas J, Munywoki P, Ngama M, Newton CR, Maitland K, Berkley JA.

Bull World Health Organ. 2009 Apr;87(4):263-70.

20.

Factors associated with increased risk of progression to respiratory syncytial virus-associated pneumonia in young Kenyan children.

Okiro EA, Ngama M, Bett A, Cane PA, Medley GF, James Nokes D.

Trop Med Int Health. 2008 Jul;13(7):914-26. doi: 10.1111/j.1365-3156.2008.02092.x. Epub 2008 May 8.

21.

Respiratory syncytial virus infection and disease in infants and young children observed from birth in Kilifi District, Kenya.

Nokes DJ, Okiro EA, Ngama M, Ochola R, White LJ, Scott PD, English M, Cane PA, Medley GF.

Clin Infect Dis. 2008 Jan 1;46(1):50-7. doi: 10.1086/524019.

22.

Comparison of strain-specific antibody responses during primary and secondary infections with respiratory syncytial virus.

Scott PD, Ochola R, Sande C, Ngama M, Okiro EA, Medley GF, Nokes DJ, Cane PA.

J Med Virol. 2007 Dec;79(12):1943-50.

PMID:
17935184
23.

Molecular analysis of respiratory syncytial virus reinfections in infants from coastal Kenya.

Scott PD, Ochola R, Ngama M, Okiro EA, James Nokes D, Medley GF, Cane PA.

J Infect Dis. 2006 Jan 1;193(1):59-67. Epub 2005 Nov 17.

24.

Comparison of three methods of collecting nasal specimens for respiratory virus analysis.

Ngama MJ, Ouma B, English ME, Nokes DJ.

East Afr Med J. 2004 Jun;81(6):313-7.

PMID:
16167679
25.

Respiratory syncytial virus epidemiology in a birth cohort from Kilifi district, Kenya: infection during the first year of life.

Nokes DJ, Okiro EA, Ngama M, White LJ, Ochola R, Scott PD, Cane PA, Medley GF.

J Infect Dis. 2004 Nov 15;190(10):1828-32. Epub 2004 Oct 8.

PMID:
15499540
26.

Molecular epidemiology of respiratory syncytial virus in Kilifi district, Kenya.

Scott PD, Ochola R, Ngama M, Okiro EA, Nokes DJ, Medley GF, Cane PA.

J Med Virol. 2004 Oct;74(2):344-54.

PMID:
15332285
27.

Signs of illness in Kenyan infants aged less than 60 days.

English M, Ngama M, Mwalekwa L, Peshu N.

Bull World Health Organ. 2004 May;82(5):323-9.

28.

Causes and outcome of young infant admissions to a Kenyan district hospital.

English M, Ngama M, Musumba C, Wamola B, Bwika J, Mohammed S, Ahmed M, Mwarumba S, Ouma B, McHugh K, Newton C.

Arch Dis Child. 2003 May;88(5):438-43.

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