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Items: 1 to 50 of 70

1.

From worm to germ: Germ cell development and regeneration in planarians.

Issigonis M, Newmark PA.

Curr Top Dev Biol. 2019;135:127-153. doi: 10.1016/bs.ctdb.2019.04.001. Epub 2019 May 2.

PMID:
31155357
2.

A planarian nidovirus expands the limits of RNA genome size.

Saberi A, Gulyaeva AA, Brubacher JL, Newmark PA, Gorbalenya AE.

PLoS Pathog. 2018 Nov 1;14(11):e1007314. doi: 10.1371/journal.ppat.1007314. eCollection 2018 Nov.

3.

Stem cell heterogeneity drives the parasitic life cycle of Schistosoma mansoni.

Wang B, Lee J, Li P, Saberi A, Yang H, Liu C, Zhao M, Newmark PA.

Elife. 2018 Jul 10;7. pii: e35449. doi: 10.7554/eLife.35449.

4.

Whole-Mount In Situ Hybridization of Planarians.

King RS, Newmark PA.

Methods Mol Biol. 2018;1774:379-392. doi: 10.1007/978-1-4939-7802-1_12.

PMID:
29916165
5.

Fixation, Processing, and Immunofluorescent Labeling of Whole Mount Planarians.

Forsthoefel DJ, Ross KG, Newmark PA, Zayas RM.

Methods Mol Biol. 2018;1774:353-366. doi: 10.1007/978-1-4939-7802-1_10.

PMID:
29916163
6.

Prospecting for Planarian Pluripotency.

Rozario T, Newmark PA.

Cell. 2018 Jun 14;173(7):1566-1567. doi: 10.1016/j.cell.2018.05.062.

PMID:
29906442
7.

Genetic dissection of the planarian reproductive system through characterization of Schmidtea mediterranea CPEB homologs.

Rouhana L, Tasaki J, Saberi A, Newmark PA.

Dev Biol. 2017 Jun 1;426(1):43-55. doi: 10.1016/j.ydbio.2017.04.008. Epub 2017 Apr 21.

8.

A functional genomics screen in planarians reveals regulators of whole-brain regeneration.

Roberts-Galbraith RH, Brubacher JL, Newmark PA.

Elife. 2016 Sep 9;5. pii: e17002. doi: 10.7554/eLife.17002.

9.

A premeiotic function for boule in the planarian Schmidtea mediterranea.

Iyer H, Issigonis M, Sharma PP, Extavour CG, Newmark PA.

Proc Natl Acad Sci U S A. 2016 Jun 21;113(25):E3509-18. doi: 10.1073/pnas.1521341113. Epub 2016 Jun 2.

10.

NF-YB Regulates Spermatogonial Stem Cell Self-Renewal and Proliferation in the Planarian Schmidtea mediterranea.

Iyer H, Collins JJ 3rd, Newmark PA.

PLoS Genet. 2016 Jun 15;12(6):e1006109. doi: 10.1371/journal.pgen.1006109. eCollection 2016 Jun.

11.

GPCRs Direct Germline Development and Somatic Gonad Function in Planarians.

Saberi A, Jamal A, Beets I, Schoofs L, Newmark PA.

PLoS Biol. 2016 May 10;14(5):e1002457. doi: 10.1371/journal.pbio.1002457. eCollection 2016 May.

12.

Stem cell progeny contribute to the schistosome host-parasite interface.

Collins JJ 3rd, Wendt GR, Iyer H, Newmark PA.

Elife. 2016 Mar 22;5:e12473. doi: 10.7554/eLife.12473.

13.

Mass Spectrometry Imaging and Identification of Peptides Associated with Cephalic Ganglia Regeneration in Schmidtea mediterranea.

Ong TH, Romanova EV, Roberts-Galbraith RH, Yang N, Zimmerman TA, Collins JJ 3rd, Lee JE, Kelleher NL, Newmark PA, Sweedler JV.

J Biol Chem. 2016 Apr 8;291(15):8109-20. doi: 10.1074/jbc.M115.709196. Epub 2016 Feb 16.

14.

Heal Thy Cell(f): A Single-Cell View of Regeneration.

Issigonis M, Newmark PA.

Dev Cell. 2015 Dec 7;35(5):527-528. doi: 10.1016/j.devcel.2015.11.019.

15.

Correction: Genome-Wide Analyses Reveal a Role for Peptide Hormones in Planarian Germline Development.

Collins JJ 3rd, Hou X, Romanova EV, Lambrus BG, Miller CM, Saberi A, Sweedler JV, Newmark PA.

PLoS Biol. 2015 Aug 14;13(8):e1002234. doi: 10.1371/journal.pbio.1002234. eCollection 2015 Aug. No abstract available.

16.

Planarian 'kidneys' go with the flow.

Issigonis M, Newmark PA.

Elife. 2015 Jul 22;4:e09353. doi: 10.7554/eLife.09353.

17.

A confocal microscopy-based atlas of tissue architecture in the tapeworm Hymenolepis diminuta.

Rozario T, Newmark PA.

Exp Parasitol. 2015 Nov;158:31-41. doi: 10.1016/j.exppara.2015.05.015. Epub 2015 Jun 3.

18.

Tryptophan hydroxylase Is Required for Eye Melanogenesis in the Planarian Schmidtea mediterranea.

Lambrus BG, Cochet-Escartin O, Gao J, Newmark PA, Collins EM, Collins JJ 3rd.

PLoS One. 2015 May 27;10(5):e0127074. doi: 10.1371/journal.pone.0127074. eCollection 2015.

19.

On the organ trail: insights into organ regeneration in the planarian.

Roberts-Galbraith RH, Newmark PA.

Curr Opin Genet Dev. 2015 Jun;32:37-46. doi: 10.1016/j.gde.2015.01.009. Epub 2015 Feb 19. Review.

PMID:
25703843
20.

Generation of cell type-specific monoclonal antibodies for the planarian and optimization of sample processing for immunolabeling.

Forsthoefel DJ, Waters FA, Newmark PA.

BMC Dev Biol. 2014 Dec 21;14:45. doi: 10.1186/s12861-014-0045-6.

21.

A lophotrochozoan-specific nuclear hormone receptor is required for reproductive system development in the planarian.

Tharp ME, Collins JJ 3rd, Newmark PA.

Dev Biol. 2014 Dec 1;396(1):150-7. doi: 10.1016/j.ydbio.2014.09.024. Epub 2014 Sep 30.

22.

PIWI homologs mediate histone H4 mRNA localization to planarian chromatoid bodies.

Rouhana L, Weiss JA, King RS, Newmark PA.

Development. 2014 Jul;141(13):2592-601. doi: 10.1242/dev.101618. Epub 2014 Jun 5.

23.

Preparation of the planarian Schmidtea mediterranea for high-resolution histology and transmission electron microscopy.

Brubacher JL, Vieira AP, Newmark PA.

Nat Protoc. 2014 Mar;9(3):661-73. doi: 10.1038/nprot.2014.041. Epub 2014 Feb 20.

24.

Functional genomic characterization of neoblast-like stem cells in larval Schistosoma mansoni

Wang B, Collins JJ 3rd, Newmark PA.

Elife. 2013 Jul 30;2:e00768. doi: 10.7554/eLife.00768.

25.

Restoration of anterior regeneration in a planarian with limited regenerative ability.

Sikes JM, Newmark PA.

Nature. 2013 Aug 1;500(7460):77-80. doi: 10.1038/nature12403. Epub 2013 Jul 24.

26.

It's no fluke: the planarian as a model for understanding schistosomes.

Collins JJ 3rd, Newmark PA.

PLoS Pathog. 2013;9(7):e1003396. doi: 10.1371/journal.ppat.1003396. Epub 2013 Jul 18. Review. No abstract available.

27.

A sex-specific transcription factor controls male identity in a simultaneous hermaphrodite.

Chong T, Collins JJ 3rd, Brubacher JL, Zarkower D, Newmark PA.

Nat Commun. 2013;4:1814. doi: 10.1038/ncomms2811.

28.
29.

RNA interference by feeding in vitro-synthesized double-stranded RNA to planarians: methodology and dynamics.

Rouhana L, Weiss JA, Forsthoefel DJ, Lee H, King RS, Inoue T, Shibata N, Agata K, Newmark PA.

Dev Dyn. 2013 Jun;242(6):718-30. doi: 10.1002/dvdy.23950. Epub 2013 Apr 1.

30.

Adult somatic stem cells in the human parasite Schistosoma mansoni.

Collins JJ 3rd, Wang B, Lambrus BG, Tharp ME, Iyer H, Newmark PA.

Nature. 2013 Feb 28;494(7438):476-9. doi: 10.1038/nature11924. Epub 2013 Feb 20.

31.

Follistatin antagonizes activin signaling and acts with notum to direct planarian head regeneration.

Roberts-Galbraith RH, Newmark PA.

Proc Natl Acad Sci U S A. 2013 Jan 22;110(4):1363-8. doi: 10.1073/pnas.1214053110. Epub 2013 Jan 7.

32.

An RNAi screen reveals intestinal regulators of branching morphogenesis, differentiation, and stem cell proliferation in planarians.

Forsthoefel DJ, James NP, Escobar DJ, Stary JM, Vieira AP, Waters FA, Newmark PA.

Dev Cell. 2012 Oct 16;23(4):691-704. doi: 10.1016/j.devcel.2012.09.008.

33.

The cell biology of regeneration.

King RS, Newmark PA.

J Cell Biol. 2012 Mar 5;196(5):553-62. doi: 10.1083/jcb.201105099. Review.

34.

PRMT5 and the role of symmetrical dimethylarginine in chromatoid bodies of planarian stem cells.

Rouhana L, Vieira AP, Roberts-Galbraith RH, Newmark PA.

Development. 2012 Mar;139(6):1083-94. doi: 10.1242/dev.076182. Epub 2012 Feb 8.

35.

An insulin-like peptide regulates size and adult stem cells in planarians.

Miller CM, Newmark PA.

Int J Dev Biol. 2012;56(1-3):75-82. doi: 10.1387/ijdb.113443cm.

36.

Molecular markers to characterize the hermaphroditic reproductive system of the planarian Schmidtea mediterranea.

Chong T, Stary JM, Wang Y, Newmark PA.

BMC Dev Biol. 2011 Nov 10;11:69. doi: 10.1186/1471-213X-11-69.

37.

Stem cell-based growth, regeneration, and remodeling of the planarian intestine.

Forsthoefel DJ, Park AE, Newmark PA.

Dev Biol. 2011 Aug 15;356(2):445-59. doi: 10.1016/j.ydbio.2011.05.669. Epub 2011 Jun 2.

38.

An atlas for Schistosoma mansoni organs and life-cycle stages using cell type-specific markers and confocal microscopy.

Collins JJ 3rd, King RS, Cogswell A, Williams DL, Newmark PA.

PLoS Negl Trop Dis. 2011 Mar 8;5(3):e1009. doi: 10.1371/journal.pntd.0001009.

39.

Wound healing and regeneration: time heals all wounds, but sometimes it needs a little help.

Bement WM, Newmark PA.

Mol Biol Cell. 2011 Mar 15;22(6):719. doi: 10.1091/mbc.E11-01-0011. No abstract available.

40.

Whole mount in situ hybridization methodology for Schistosoma mansoni.

Cogswell AA, Collins JJ 3rd, Newmark PA, Williams DL.

Mol Biochem Parasitol. 2011 Jul-Aug;178(1-2):46-50. doi: 10.1016/j.molbiopara.2011.03.001. Epub 2011 Mar 21.

41.

Visions: the art of science.

Wang Y, Newmark PA.

Mol Reprod Dev. 2010 Nov;77(11):933. doi: 10.1002/mrd.21246. No abstract available.

PMID:
21104747
42.

Genome-wide analyses reveal a role for peptide hormones in planarian germline development.

Collins JJ 3rd, Hou X, Romanova EV, Lambrus BG, Miller CM, Saberi A, Sweedler JV, Newmark PA.

PLoS Biol. 2010 Oct 12;8(10):e1000509. doi: 10.1371/journal.pbio.1000509. Erratum in: PLoS Biol. 2015 Aug;13(8):e1002234.

43.

The use of lectins as markers for differentiated secretory cells in planarians.

Zayas RM, Cebrià F, Guo T, Feng J, Newmark PA.

Dev Dyn. 2010 Nov;239(11):2888-97. doi: 10.1002/dvdy.22427.

44.

A functional genomic screen in planarians identifies novel regulators of germ cell development.

Wang Y, Stary JM, Wilhelm JE, Newmark PA.

Genes Dev. 2010 Sep 15;24(18):2081-92. doi: 10.1101/gad.1951010.

45.

Emerging patterns in planarian regeneration.

Forsthoefel DJ, Newmark PA.

Curr Opin Genet Dev. 2009 Aug;19(4):412-20. doi: 10.1016/j.gde.2009.05.003. Epub 2009 Jul 1.

46.

Germ cell specification and regeneration in planarians.

Newmark PA, Wang Y, Chong T.

Cold Spring Harb Symp Quant Biol. 2008;73:573-81. doi: 10.1101/sqb.2008.73.022. Epub 2008 Nov 6. Review.

PMID:
19022767
47.

Gene nomenclature guidelines for the planarian Schmidtea mediterranea.

Reddien PW, Newmark PA, Sánchez Alvarado A.

Dev Dyn. 2008 Nov;237(11):3099-101. doi: 10.1002/dvdy.21623.

48.

Regeneration and maintenance of the planarian midline is regulated by a slit orthologue.

Cebrià F, Guo T, Jopek J, Newmark PA.

Dev Biol. 2007 Jul 15;307(2):394-406. Epub 2007 May 22.

49.

nanos function is essential for development and regeneration of planarian germ cells.

Wang Y, Zayas RM, Guo T, Newmark PA.

Proc Natl Acad Sci U S A. 2007 Apr 3;104(14):5901-6. Epub 2007 Mar 21.

50.

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